RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ARHGAP45Q92619 1136 aa15.52■□□□□ 0.08
SREBF1-215ENST00000487401 TEKT1Q969V4 418 aa15.52■□□□□ 0.08
SREBF1-215ENST00000487401 FBXO3Q9UK99 471 aa15.52■□□□□ 0.08
SREBF1-215ENST00000487401 SUGT1Q9Y2Z0 365 aa15.52■□□□□ 0.08
SREBF1-215ENST00000487401 LRRFIP2Q9Y608 721 aaKnown RBP15.52■□□□□ 0.08
SREBF1-215ENST00000487401 SPEF2Q9C093 1822 aa15.52■□□□□ 0.07
SREBF1-215ENST00000487401 CACNA1FO60840 1977 aa15.51■□□□□ 0.07
SREBF1-215ENST00000487401 MANSC4A6NHS7 340 aaPredicted RBP15.51■□□□□ 0.07
SREBF1-215ENST00000487401 IPO8O15397 1037 aaKnown RBP15.51■□□□□ 0.07
SREBF1-215ENST00000487401 USP2O75604 605 aaPredicted RBP15.51■□□□□ 0.07
SREBF1-215ENST00000487401 CIAO1O76071 339 aa15.51■□□□□ 0.07
SREBF1-215ENST00000487401 ATG9AQ7Z3C6 839 aa15.51■□□□□ 0.07
SREBF1-215ENST00000487401 CTU1Q7Z7A3 348 aaKnown RBP15.51■□□□□ 0.07
SREBF1-215ENST00000487401 WDR66Q8TBY9 1149 aa15.51■□□□□ 0.07
SREBF1-215ENST00000487401 CLMNQ96JQ2 1002 aa15.51■□□□□ 0.07
SREBF1-215ENST00000487401 MRIQ9BWK5 157 aa15.51■□□□□ 0.07
SREBF1-215ENST00000487401 GNL3LQ9NVN8 582 aaKnown RBP15.51■□□□□ 0.07
SREBF1-215ENST00000487401 MAST3O60307 1309 aa15.5■□□□□ 0.07
SREBF1-215ENST00000487401 ALDH1A1P00352 501 aa15.5■□□□□ 0.07
SREBF1-215ENST00000487401 GNAI3P08754 354 aa15.5■□□□□ 0.07
SREBF1-215ENST00000487401 ZBTB48P10074 688 aaPredicted RBP15.5■□□□□ 0.07
SREBF1-215ENST00000487401 IL15P40933 162 aaPredicted RBP15.5■□□□□ 0.07
SREBF1-215ENST00000487401 ATP2B3Q16720 1220 aa15.5■□□□□ 0.07
SREBF1-215ENST00000487401 ANKRD13AQ8IZ07 590 aa15.5■□□□□ 0.07
SREBF1-215ENST00000487401 WNK4Q96J92 1243 aa15.5■□□□□ 0.07
SREBF1-215ENST00000487401 TMOD2Q9NZR1 351 aa15.5■□□□□ 0.07
SREBF1-215ENST00000487401 PSME4Q14997 1843 aa15.5■□□□□ 0.07
SREBF1-215ENST00000487401 ZNF296Q8WUU4 475 aaPredicted RBP15.49■□□□□ 0.07
SREBF1-215ENST00000487401 ZDHHC15Q96MV8 337 aa15.49■□□□□ 0.07
SREBF1-215ENST00000487401 MEIS3Q99687 375 aa15.49■□□□□ 0.07
SREBF1-215ENST00000487401 TMEM39BQ9GZU3 492 aa15.49■□□□□ 0.07
SREBF1-215ENST00000487401 GPR25O00155 361 aa15.48■□□□□ 0.07
SREBF1-215ENST00000487401 INTS3Q68E01 1043 aaKnown RBP15.48■□□□□ 0.07
SREBF1-215ENST00000487401 TEPSINQ96N21 525 aa15.48■□□□□ 0.07
SREBF1-215ENST00000487401 PA2G4Q9UQ80 394 aaKnown RBP15.48■□□□□ 0.07
SREBF1-215ENST00000487401 SSC5DA1L4H1 1573 aa15.47■□□□□ 0.07
SREBF1-215ENST00000487401 FKTNO75072 461 aa15.47■□□□□ 0.07
SREBF1-215ENST00000487401 CACNB3P54284 484 aa15.47■□□□□ 0.07
SREBF1-215ENST00000487401 MAP3K9P80192 1104 aa15.47■□□□□ 0.07
SREBF1-215ENST00000487401 MLLT1Q03111 559 aaPredicted RBP15.47■□□□□ 0.07
SREBF1-215ENST00000487401 PKN2Q16513 984 aaKnown RBP15.47■□□□□ 0.07
SREBF1-215ENST00000487401 NOM1Q5C9Z4 860 aaKnown RBP15.47■□□□□ 0.07
SREBF1-215ENST00000487401 OTUD7BQ6GQQ9 843 aa15.47■□□□□ 0.07
SREBF1-215ENST00000487401 APOBEC3HQ6NTF7 200 aaKnown RBP15.47■□□□□ 0.07
SREBF1-215ENST00000487401 HHIPL2Q6UWX4 724 aa15.47■□□□□ 0.07
SREBF1-215ENST00000487401 IFNL1Q8IU54 200 aa15.47■□□□□ 0.07
SREBF1-215ENST00000487401 FRAT1Q92837 279 aaPredicted RBP15.47■□□□□ 0.07
SREBF1-215ENST00000487401 CFHR5Q9BXR6 569 aa15.47■□□□□ 0.07
SREBF1-215ENST00000487401 ELP3Q9H9T3 547 aa15.47■□□□□ 0.07
SREBF1-215ENST00000487401 COPRSQ9NQ92 184 aa15.47■□□□□ 0.07
SREBF1-215ENST00000487401 SRGAP3O43295 1099 aa15.46■□□□□ 0.07
SREBF1-215ENST00000487401 FKBP1CQ5VVH2 108 aa15.46■□□□□ 0.07
SREBF1-215ENST00000487401 CDAN1Q8IWY9 1227 aa15.46■□□□□ 0.07
SREBF1-215ENST00000487401 HOOK2Q96ED9 719 aa15.46■□□□□ 0.07
SREBF1-215ENST00000487401 DENND2AQ9ULE3 1009 aa15.46■□□□□ 0.07
SREBF1-215ENST00000487401 CSADQ9Y600 493 aa15.46■□□□□ 0.07
SREBF1-215ENST00000487401 POLR2AP24928 1970 aaKnown RBP15.45■□□□□ 0.06
SREBF1-215ENST00000487401 BCAR3O75815 825 aa15.45■□□□□ 0.06
SREBF1-215ENST00000487401 LDHBP07195 334 aaKnown RBP15.45■□□□□ 0.06
SREBF1-215ENST00000487401 RGS19P49795 217 aa15.45■□□□□ 0.06
SREBF1-215ENST00000487401 ATF7IPQ6VMQ6 1270 aa15.45■□□□□ 0.06
SREBF1-215ENST00000487401 FAM83AQ86UY5 434 aa15.45■□□□□ 0.06
SREBF1-215ENST00000487401 OPTNQ96CV9 577 aa15.45■□□□□ 0.06
SREBF1-215ENST00000487401 R3HDMLQ9H3Y0 253 aa15.45■□□□□ 0.06
SREBF1-215ENST00000487401 SEMA3EO15041 775 aa15.44■□□□□ 0.06
SREBF1-215ENST00000487401 GNAI2P04899 355 aa15.44■□□□□ 0.06
SREBF1-215ENST00000487401 TRIM27P14373 513 aa15.44■□□□□ 0.06
SREBF1-215ENST00000487401 GJA5P36382 358 aa15.44■□□□□ 0.06
SREBF1-215ENST00000487401 PHKA1P46020 1223 aa15.44■□□□□ 0.06
SREBF1-215ENST00000487401 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.44■□□□□ 0.06
SREBF1-215ENST00000487401 MIER1Q8N108 512 aa15.44■□□□□ 0.06
SREBF1-215ENST00000487401 AKAP2Q9Y2D5 859 aa15.44■□□□□ 0.06
SREBF1-215ENST00000487401 IGF2BP3O00425 579 aaKnown RBP eCLIP15.43■□□□□ 0.06
SREBF1-215ENST00000487401 ADORA1P30542 326 aa15.43■□□□□ 0.06
SREBF1-215ENST00000487401 TIMM10P62072 90 aa15.43■□□□□ 0.06
SREBF1-215ENST00000487401 HNRNPUQ00839 825 aaKnown RBP eCLIP15.43■□□□□ 0.06
SREBF1-215ENST00000487401 DIEXFQ68CQ4 756 aaKnown RBP15.43■□□□□ 0.06
SREBF1-215ENST00000487401 CLUAP1Q96AJ1 413 aa15.43■□□□□ 0.06
SREBF1-215ENST00000487401 HPS5Q9UPZ3 1129 aa15.43■□□□□ 0.06
SREBF1-215ENST00000487401 ZNF646O15015 1829 aaPredicted RBP15.43■□□□□ 0.06
SREBF1-215ENST00000487401 GTF2A2P52657 109 aa15.42■□□□□ 0.06
SREBF1-215ENST00000487401 TFCP2Q12800 502 aa15.42■□□□□ 0.06
SREBF1-215ENST00000487401 VGLL4Q14135 290 aa15.42■□□□□ 0.06
SREBF1-215ENST00000487401 DIXDC1Q155Q3 683 aa15.42■□□□□ 0.06
SREBF1-215ENST00000487401 DCAF15Q66K64 600 aa15.42■□□□□ 0.06
SREBF1-215ENST00000487401 CCDC102BQ68D86 513 aa15.42■□□□□ 0.06
SREBF1-215ENST00000487401 ZGPATQ8N5A5 531 aaKnown RBP15.42■□□□□ 0.06
SREBF1-215ENST00000487401 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.42■□□□□ 0.06
SREBF1-215ENST00000487401 USP40Q9NVE5 1235 aa15.42■□□□□ 0.06
SREBF1-215ENST00000487401 DAGLAQ9Y4D2 1042 aa15.42■□□□□ 0.06
SREBF1-215ENST00000487401 TESPA1A2RU30 521 aaPredicted RBP15.41■□□□□ 0.06
SREBF1-215ENST00000487401 PRDX5P30044 214 aa15.41■□□□□ 0.06
SREBF1-215ENST00000487401 SOX10P56693 466 aa15.41■□□□□ 0.06
SREBF1-215ENST00000487401 G3BP1Q13283 466 aaKnown RBP eCLIP15.41■□□□□ 0.06
SREBF1-215ENST00000487401 MTX1Q13505 466 aa15.41■□□□□ 0.06
SREBF1-215ENST00000487401 MVPQ14764 893 aaKnown RBP15.41■□□□□ 0.06
SREBF1-215ENST00000487401 ZKSCAN2Q63HK3 967 aa15.41■□□□□ 0.06
SREBF1-215ENST00000487401 CDC42EP5Q6NZY7 148 aa15.41■□□□□ 0.06
SREBF1-215ENST00000487401 FAM151AQ8WW52 585 aa15.41■□□□□ 0.06
SREBF1-215ENST00000487401 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms