RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 PTPN12Q05209 780 aaKnown RBP5.36□□□□□ -1.55
POLR2B-208ENST00000478188 CAMK2BQ13554 666 aa5.36□□□□□ -1.55
POLR2B-208ENST00000478188 USP50Q70EL3 339 aaPredicted RBP5.36□□□□□ -1.55
POLR2B-208ENST00000478188 MEIS3Q99687 375 aa5.36□□□□□ -1.55
POLR2B-208ENST00000478188 ZNF804BA4D1E1 1349 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 ANKRD18BA2A2Z9 1011 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 RAD17O75943 681 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 CTCFP49711 727 aaPredicted RBP5.35□□□□□ -1.55
POLR2B-208ENST00000478188 EIF6P56537 245 aaKnown RBP5.35□□□□□ -1.55
POLR2B-208ENST00000478188 HTRA3P83110 453 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 LRRC24Q50LG9 513 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 CERS5Q8N5B7 392 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 JDP2Q8WYK2 163 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 EYA3Q99504 573 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 ASTN2O75129 1339 aaPredicted RBP5.35□□□□□ -1.55
POLR2B-208ENST00000478188 HRO43593 1189 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 RPS12P25398 132 aaKnown RBP5.35□□□□□ -1.55
POLR2B-208ENST00000478188 FMR1Q06787 632 aaKnown RBP eCLIP5.35□□□□□ -1.551e-7■■□□□ 12.1
POLR2B-208ENST00000478188 RSBN1LQ6PCB5 846 aaPredicted RBP5.35□□□□□ -1.55
POLR2B-208ENST00000478188 SLC4A10Q6U841 1118 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 ATF7IPQ6VMQ6 1270 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 ABHD8Q96I13 439 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 API5Q9BZZ5 524 aaKnown RBP5.35□□□□□ -1.55
POLR2B-208ENST00000478188 ADARB2Q9NS39 739 aaKnown RBP5.35□□□□□ -1.55
POLR2B-208ENST00000478188 PLA2G2EQ9NZK7 142 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 AOX1Q06278 1338 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 FAM205AQ6ZU69 1335 aa5.35□□□□□ -1.55
POLR2B-208ENST00000478188 KLHDC4Q8TBB5 520 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 MXD3Q9BW11 206 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 ANKRD2Q9GZV1 360 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 CNTNAP1P78357 1384 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 PHIPQ8WWQ0 1821 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 TAF5LO75529 589 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 PTPREP23469 700 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 IGHMBP2P38935 993 aaKnown RBP5.34□□□□□ -1.55
POLR2B-208ENST00000478188 FKBP1AP62942 108 aaKnown RBP5.34□□□□□ -1.55
POLR2B-208ENST00000478188 MAP3K9P80192 1104 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 IFIT5Q13325 482 aaKnown RBP5.34□□□□□ -1.55
POLR2B-208ENST00000478188 CST9Q5W186 159 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 PODNQ7Z5L7 613 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 PNMA8AQ86V59 439 aaPredicted RBP5.34□□□□□ -1.55
POLR2B-208ENST00000478188 AGBL3Q8NEM8 1001 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 COA1Q9GZY4 146 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 GJA3Q9Y6H8 435 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 MYH2Q9UKX2 1941 aa5.34□□□□□ -1.55
POLR2B-208ENST00000478188 RFX7Q2KHR2 1363 aa5.34□□□□□ -1.56
POLR2B-208ENST00000478188 C6orf229H3BNL8 230 aa5.34□□□□□ -1.56
POLR2B-208ENST00000478188 TNIP1Q15025 636 aa5.34□□□□□ -1.56
POLR2B-208ENST00000478188 FBXO33Q7Z6M2 555 aa5.34□□□□□ -1.56
POLR2B-208ENST00000478188 TMEM57Q8N5G2 664 aa5.34□□□□□ -1.56
POLR2B-208ENST00000478188 TDRD7Q8NHU6 1098 aaKnown RBP5.34□□□□□ -1.56
POLR2B-208ENST00000478188 KCTD12Q96CX2 325 aaKnown RBP5.34□□□□□ -1.56
POLR2B-208ENST00000478188 CD209Q9NNX6 404 aa5.34□□□□□ -1.56
POLR2B-208ENST00000478188 COPRSQ9NQ92 184 aa5.34□□□□□ -1.56
POLR2B-208ENST00000478188 EMILIN3Q9NT22 766 aa5.34□□□□□ -1.56
POLR2B-208ENST00000478188 C9orf78Q9NZ63 289 aaPredicted RBP5.34□□□□□ -1.56
POLR2B-208ENST00000478188 LRRFIP2Q9Y608 721 aaKnown RBP5.34□□□□□ -1.56
POLR2B-208ENST00000478188 MROH5Q6ZUA9 1318 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 CIAO1O76071 339 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 GRIK5Q16478 980 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 STRIP1Q5VSL9 837 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 MAP1SQ66K74 1059 aaPredicted RBP5.33□□□□□ -1.56
POLR2B-208ENST00000478188 HELBQ8NG08 1087 aaPredicted RBP5.33□□□□□ -1.56
POLR2B-208ENST00000478188 KCNV2Q8TDN2 545 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 ZC3H15Q8WU90 426 aaKnown RBP5.33□□□□□ -1.56
POLR2B-208ENST00000478188 FAM84BQ96KN1 310 aaPredicted RBP5.33□□□□□ -1.56
POLR2B-208ENST00000478188 SLC4A5Q9BY07 1137 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 ANKIB1Q9P2G1 1089 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 CNOT7Q9UIV1 285 aaKnown RBP5.33□□□□□ -1.56
POLR2B-208ENST00000478188 PCNTO95613 3336 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 USP17L3A6NCW0 530 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 USP17L4A6NCW7 530 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 RASSF10A6NK89 507 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 TRAF5O00463 557 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 EVI5O60447 810 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 FOSBP53539 338 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 UBE4AQ14139 1066 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 DLK2Q6UY11 383 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 USP17L1Q7RTZ2 530 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 MTMR14Q8NCE2 650 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 MYH7P12883 1935 aa5.33□□□□□ -1.56
POLR2B-208ENST00000478188 PNMA6EA0A0J9YXQ4 647 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 GOLGA8CPA6NN73 597 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 EYA2O00167 538 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 ZBTB7BO15156 539 aaPredicted RBP5.32□□□□□ -1.56
POLR2B-208ENST00000478188 SAMD7Q7Z3H4 446 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 CNTROBQ8N137 903 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 ZC3H12CQ9C0D7 883 aaKnown RBP5.32□□□□□ -1.56
POLR2B-208ENST00000478188 VPS9D1Q9Y2B5 631 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 PDE8BO95263 885 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 CCDC57Q2TAC2 916 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 LDHAL6AQ6ZMR3 332 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 C16orf71Q8IYS4 520 aaPredicted RBP5.32□□□□□ -1.56
POLR2B-208ENST00000478188 PCDHAC2Q9Y5I4 1007 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 ATAD5Q96QE3 1844 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 PTPRFP10586 1907 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 UBTFL1P0CB47 393 aaPredicted RBP5.32□□□□□ -1.56
POLR2B-208ENST00000478188 ZKSCAN2Q63HK3 967 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 ZDHHC16Q969W1 377 aa5.32□□□□□ -1.56
POLR2B-208ENST00000478188 MPHOSPH8Q99549 860 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms