RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 TTF2Q9UNY4 1162 aaKnown RBP8.94□□□□□ -0.98
LSAMP-203ENST00000474851 SLC5A1P13866 664 aa8.93□□□□□ -0.98
LSAMP-203ENST00000474851 ADORA1P30542 326 aa8.93□□□□□ -0.98
LSAMP-203ENST00000474851 TIMM10P62072 90 aa8.93□□□□□ -0.98
LSAMP-203ENST00000474851 FKBP1BP68106 108 aa8.93□□□□□ -0.98
LSAMP-203ENST00000474851 ATP8B2P98198 1209 aa8.93□□□□□ -0.98
LSAMP-203ENST00000474851 MAP2K1Q02750 393 aaPredicted RBP8.93□□□□□ -0.98
LSAMP-203ENST00000474851 CHAF1AQ13111 956 aaPredicted RBP8.93□□□□□ -0.98
LSAMP-203ENST00000474851 ATP2B3Q16720 1220 aa8.93□□□□□ -0.98
LSAMP-203ENST00000474851 SPDYE2Q495Y8 402 aa8.93□□□□□ -0.98
LSAMP-203ENST00000474851 RGMBQ6NW40 437 aa8.93□□□□□ -0.98
LSAMP-203ENST00000474851 PAXIP1Q6ZW49 1069 aaPredicted RBP8.93□□□□□ -0.98
LSAMP-203ENST00000474851 MOB2Q70IA6 237 aa8.93□□□□□ -0.98
LSAMP-203ENST00000474851 PANK1Q8TE04 598 aa8.93□□□□□ -0.98
LSAMP-203ENST00000474851 CLRN2A0PK11 232 aa8.92□□□□□ -0.98
LSAMP-203ENST00000474851 UBE2Q2LH0YL09 131 aa8.92□□□□□ -0.98
LSAMP-203ENST00000474851 PHKA1P46020 1223 aa8.92□□□□□ -0.98
LSAMP-203ENST00000474851 CRKP46108 304 aa8.92□□□□□ -0.98
LSAMP-203ENST00000474851 HDLBPQ00341 1268 aaKnown RBP8.92□□□□□ -0.98
LSAMP-203ENST00000474851 TFCP2Q12800 502 aa8.92□□□□□ -0.98
LSAMP-203ENST00000474851 GRM1Q13255 1194 aa8.92□□□□□ -0.98
LSAMP-203ENST00000474851 APOBEC3HQ6NTF7 200 aaKnown RBP8.92□□□□□ -0.98
LSAMP-203ENST00000474851 APOBEC3FQ8IUX4 373 aaKnown RBP8.92□□□□□ -0.98
LSAMP-203ENST00000474851 SSH3Q8TE77 659 aa8.92□□□□□ -0.98
LSAMP-203ENST00000474851 TBC1D22AQ8WUA7 517 aa8.92□□□□□ -0.98
LSAMP-203ENST00000474851 ZNF70Q9UC06 446 aaPredicted RBP8.92□□□□□ -0.98
LSAMP-203ENST00000474851 SSUH2Q9Y2M2 353 aa8.92□□□□□ -0.98
LSAMP-203ENST00000474851 SUGT1Q9Y2Z0 365 aa8.92□□□□□ -0.98
LSAMP-203ENST00000474851 SCN9AQ15858 1988 aa8.92□□□□□ -0.98
LSAMP-203ENST00000474851 FRAT2O75474 233 aaPredicted RBP8.91□□□□□ -0.98
LSAMP-203ENST00000474851 CTCFP49711 727 aaPredicted RBP8.91□□□□□ -0.98
LSAMP-203ENST00000474851 ZNF157P51786 506 aaPredicted RBP8.91□□□□□ -0.98
LSAMP-203ENST00000474851 RBM5P52756 815 aaKnown RBP eCLIP8.91□□□□□ -0.98
LSAMP-203ENST00000474851 NOGQ13253 232 aa8.91□□□□□ -0.98
LSAMP-203ENST00000474851 RASA3Q14644 834 aa8.91□□□□□ -0.98
LSAMP-203ENST00000474851 LDLRAD1Q5T700 205 aa8.91□□□□□ -0.98
LSAMP-203ENST00000474851 CCDC102BQ68D86 513 aa8.91□□□□□ -0.98
LSAMP-203ENST00000474851 ITPRIPQ8IWB1 547 aa8.91□□□□□ -0.98
LSAMP-203ENST00000474851 FTSJ3Q8IY81 847 aaKnown RBP8.91□□□□□ -0.98
LSAMP-203ENST00000474851 WDR66Q8TBY9 1149 aa8.91□□□□□ -0.98
LSAMP-203ENST00000474851 CCDC102AQ96A19 550 aa8.91□□□□□ -0.98
LSAMP-203ENST00000474851 XAGE2Q96GT9 111 aa8.91□□□□□ -0.98
LSAMP-203ENST00000474851 TDRD3Q9H7E2 651 aaKnown RBP8.91□□□□□ -0.98
LSAMP-203ENST00000474851 C1orf115Q9H7X2 142 aa8.91□□□□□ -0.98
LSAMP-203ENST00000474851 A0A1B0GUL7 405 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 MYO1BO43795 1136 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 SLC10A3P09131 477 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 HSPA8P11142 646 aaKnown RBP8.9□□□□□ -0.98
LSAMP-203ENST00000474851 KIF23Q02241 960 aaPredicted RBP8.9□□□□□ -0.98
LSAMP-203ENST00000474851 MAP3K11Q16584 847 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 NBPF12Q5TAG4 269 aaPredicted RBP8.9□□□□□ -0.98
LSAMP-203ENST00000474851 HHIPL2Q6UWX4 724 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 ZDHHC15Q96MV8 337 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 TEPSINQ96N21 525 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 CSRNP1Q96S65 589 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 PRDM10Q9NQV6 1147 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 GNL3LQ9NVN8 582 aaKnown RBP8.9□□□□□ -0.98
LSAMP-203ENST00000474851 RCAN3Q9UKA8 241 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 FZD1Q9UP38 647 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 AKAP2Q9Y2D5 859 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 NOP58Q9Y2X3 529 aaKnown RBP8.9□□□□□ -0.98
LSAMP-203ENST00000474851 PPP2R3BQ9Y5P8 575 aa8.9□□□□□ -0.98
LSAMP-203ENST00000474851 SALL1Q9NSC2 1324 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 SEMA3EO15041 775 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 PRDX5P30044 214 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 LBX1P52954 281 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 G3BP1Q13283 466 aaKnown RBP eCLIP8.89□□□□□ -0.99
LSAMP-203ENST00000474851 RASGRF1Q13972 1273 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 IFFO2Q5TF58 517 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 CEP85Q6P2H3 762 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 RASAL3Q86YV0 1011 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 CDAN1Q8IWY9 1227 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 TEKT1Q969V4 418 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 AIDAQ96BJ3 306 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 VEZTQ9HBM0 779 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 DENND2AQ9ULE3 1009 aa8.89□□□□□ -0.99
LSAMP-203ENST00000474851 COL1A1P02452 1464 aaPredicted RBP8.89□□□□□ -0.99
LSAMP-203ENST00000474851 CACNA1FO60840 1977 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 TCP10L2B9ZVM9 353 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 USP2O75604 605 aaPredicted RBP8.88□□□□□ -0.99
LSAMP-203ENST00000474851 SURF6O75683 361 aaKnown RBP8.88□□□□□ -0.99
LSAMP-203ENST00000474851 PRKG1Q13976 671 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 DIXDC1Q155Q3 683 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 SUPT20HL1Q3ZLR7 823 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 C20orf194Q5TEA3 1177 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 FKBP1CQ5VVH2 108 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 IFNLR1Q8IU57 520 aaPredicted RBP8.88□□□□□ -0.99
LSAMP-203ENST00000474851 SIRT2Q8IXJ6 389 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 NEUROD6Q96NK8 337 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 TMEM39BQ9GZU3 492 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 GPR108Q9NPR9 543 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 ZBTB40Q9NUA8 1239 aa8.88□□□□□ -0.99
LSAMP-203ENST00000474851 RBM19Q9Y4C8 960 aaKnown RBP8.88□□□□□ -0.99
LSAMP-203ENST00000474851 PDS5AQ29RF7 1337 aaKnown RBP8.87□□□□□ -0.99
LSAMP-203ENST00000474851 MS4A1P11836 297 aa8.87□□□□□ -0.99
LSAMP-203ENST00000474851 NF2P35240 595 aa8.87□□□□□ -0.99
LSAMP-203ENST00000474851 CACNB3P54284 484 aa8.87□□□□□ -0.99
LSAMP-203ENST00000474851 TTLL12Q14166 644 aaPredicted RBP8.87□□□□□ -0.99
LSAMP-203ENST00000474851 MVPQ14764 893 aaKnown RBP8.87□□□□□ -0.99
LSAMP-203ENST00000474851 CDC42EP5Q6NZY7 148 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms