RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 ANKRD44Q8N8A2 993 aa16.06■□□□□ 0.16
SRM-203ENST00000465788 SSH1Q8WYL5 1049 aa16.06■□□□□ 0.16
SRM-203ENST00000465788 HOOK2Q96ED9 719 aa16.06■□□□□ 0.16
SRM-203ENST00000465788 TMOD2Q9NZR1 351 aa16.06■□□□□ 0.16
SRM-203ENST00000465788 HPS5Q9UPZ3 1129 aa16.06■□□□□ 0.16
SRM-203ENST00000465788 PCDHAC2Q9Y5I4 1007 aa16.06■□□□□ 0.16
SRM-203ENST00000465788 USP2O75604 605 aaPredicted RBP16.05■□□□□ 0.16
SRM-203ENST00000465788 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
SRM-203ENST00000465788 PUM3Q15397 648 aaKnown RBP16.05■□□□□ 0.16
SRM-203ENST00000465788 TEKT1Q969V4 418 aa16.05■□□□□ 0.16
SRM-203ENST00000465788 USP44Q9H0E7 712 aa16.05■□□□□ 0.16
SRM-203ENST00000465788 FBXO3Q9UK99 471 aa16.05■□□□□ 0.16
SRM-203ENST00000465788 MYH13Q9UKX3 1938 aa16.04■□□□□ 0.16
SRM-203ENST00000465788 LRRC24Q50LG9 513 aa16.04■□□□□ 0.16
SRM-203ENST00000465788 VGLL2Q8N8G2 317 aa16.04■□□□□ 0.16
SRM-203ENST00000465788 CLMNQ96JQ2 1002 aa16.04■□□□□ 0.16
SRM-203ENST00000465788 TDRD3Q9H7E2 651 aaKnown RBP16.04■□□□□ 0.16
SRM-203ENST00000465788 SLC5A1P13866 664 aa16.03■□□□□ 0.16
SRM-203ENST00000465788 SOX10P56693 466 aa16.03■□□□□ 0.16
SRM-203ENST00000465788 CHAF1AQ13111 956 aaPredicted RBP16.03■□□□□ 0.16
SRM-203ENST00000465788 FKBP1CQ5VVH2 108 aa16.03■□□□□ 0.16
SRM-203ENST00000465788 ERO1AQ96HE7 468 aa16.03■□□□□ 0.16
SRM-203ENST00000465788 SMC4Q9NTJ3 1288 aa16.03■□□□□ 0.16
SRM-203ENST00000465788 CSADQ9Y600 493 aa16.03■□□□□ 0.16
SRM-203ENST00000465788 OTOFQ9HC10 1997 aa16.03■□□□□ 0.16
SRM-203ENST00000465788 TESPA1A2RU30 521 aaPredicted RBP16.02■□□□□ 0.16
SRM-203ENST00000465788 EYA2O00167 538 aa16.02■□□□□ 0.16
SRM-203ENST00000465788 WDHD1O75717 1129 aaPredicted RBP16.02■□□□□ 0.16
SRM-203ENST00000465788 FAM83AQ86UY5 434 aa16.02■□□□□ 0.16
SRM-203ENST00000465788 WDR66Q8TBY9 1149 aa16.02■□□□□ 0.16
SRM-203ENST00000465788 LPIN2Q92539 896 aa16.02■□□□□ 0.16
SRM-203ENST00000465788 ZDHHC15Q96MV8 337 aa16.02■□□□□ 0.16
SRM-203ENST00000465788 FZD1Q9UP38 647 aa16.02■□□□□ 0.16
SRM-203ENST00000465788 TCP10L2B9ZVM9 353 aa16.01■□□□□ 0.15
SRM-203ENST00000465788 UBTFL1P0CB47 393 aaPredicted RBP16.01■□□□□ 0.15
SRM-203ENST00000465788 FGFR2P21802 821 aa16.01■□□□□ 0.15
SRM-203ENST00000465788 MAP3K9P80192 1104 aa16.01■□□□□ 0.15
SRM-203ENST00000465788 ARHGEF6Q15052 776 aa16.01■□□□□ 0.15
SRM-203ENST00000465788 HHIPL2Q6UWX4 724 aa16.01■□□□□ 0.15
SRM-203ENST00000465788 TEPSINQ96N21 525 aa16.01■□□□□ 0.15
SRM-203ENST00000465788 AOX1Q06278 1338 aa16■□□□□ 0.15
SRM-203ENST00000465788 IGF2BP3O00425 579 aaKnown RBP eCLIP16■□□□□ 0.15
SRM-203ENST00000465788 BCAMP50895 628 aa16■□□□□ 0.15
SRM-203ENST00000465788 GTF2A2P52657 109 aa16■□□□□ 0.15
SRM-203ENST00000465788 INTS3Q68E01 1043 aaKnown RBP16■□□□□ 0.15
SRM-203ENST00000465788 OPTNQ96CV9 577 aa16■□□□□ 0.15
SRM-203ENST00000465788 API5Q9BZZ5 524 aaKnown RBP16■□□□□ 0.15
SRM-203ENST00000465788 GNL3LQ9NVN8 582 aaKnown RBP16■□□□□ 0.15
SRM-203ENST00000465788 ZBTB4Q9P1Z0 1013 aaPredicted RBP16■□□□□ 0.15
SRM-203ENST00000465788 IQSEC3Q9UPP2 1182 aaPredicted RBP16■□□□□ 0.15
SRM-203ENST00000465788 RPAP1Q9BWH6 1393 aaPredicted RBP16■□□□□ 0.15
SRM-203ENST00000465788 CIAO1O76071 339 aa15.99■□□□□ 0.15
SRM-203ENST00000465788 DCAF15Q66K64 600 aa15.99■□□□□ 0.15
SRM-203ENST00000465788 TRMT2AQ8IZ69 625 aaKnown RBP15.99■□□□□ 0.15
SRM-203ENST00000465788 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.99■□□□□ 0.15
SRM-203ENST00000465788 TMEM39BQ9GZU3 492 aa15.99■□□□□ 0.15
SRM-203ENST00000465788 ELP3Q9H9T3 547 aa15.99■□□□□ 0.15
SRM-203ENST00000465788 TRIM17Q9Y577 477 aa15.99■□□□□ 0.15
SRM-203ENST00000465788 GJA5P36382 358 aa15.98■□□□□ 0.15
SRM-203ENST00000465788 RFX5P48382 616 aaPredicted RBP15.98■□□□□ 0.15
SRM-203ENST00000465788 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.98■□□□□ 0.15
SRM-203ENST00000465788 KLHDC4Q8TBB5 520 aa15.98■□□□□ 0.15
SRM-203ENST00000465788 R3HDMLQ9H3Y0 253 aa15.98■□□□□ 0.15
SRM-203ENST00000465788 ZCCHC17Q9NP64 241 aaKnown RBP15.98■□□□□ 0.15
SRM-203ENST00000465788 CEP126Q9P2H0 1117 aa15.98■□□□□ 0.15
SRM-203ENST00000465788 SEMA3EO15041 775 aa15.97■□□□□ 0.15
SRM-203ENST00000465788 ZBTB22O15209 634 aa15.97■□□□□ 0.15
SRM-203ENST00000465788 SLC34A2O95436 690 aa15.97■□□□□ 0.15
SRM-203ENST00000465788 SP3Q02447 781 aa15.97■□□□□ 0.15
SRM-203ENST00000465788 CRHR2Q13324 411 aa15.97■□□□□ 0.15
SRM-203ENST00000465788 VGLL4Q14135 290 aa15.97■□□□□ 0.15
SRM-203ENST00000465788 OTOP1Q7RTM1 612 aa15.97■□□□□ 0.15
SRM-203ENST00000465788 ERO1BQ86YB8 467 aa15.97■□□□□ 0.15
SRM-203ENST00000465788 MS4A4AQ96JQ5 239 aa15.97■□□□□ 0.15
SRM-203ENST00000465788 ZFYVE28Q9HCC9 887 aa15.97■□□□□ 0.15
SRM-203ENST00000465788 SPDYE5A6NIY4 337 aa15.96■□□□□ 0.15
SRM-203ENST00000465788 IL15P40933 162 aaPredicted RBP15.96■□□□□ 0.15
SRM-203ENST00000465788 ATP2B3Q16720 1220 aa15.96■□□□□ 0.15
SRM-203ENST00000465788 EFCC1Q9HA90 598 aa15.96■□□□□ 0.15
SRM-203ENST00000465788 AK9Q5TCS8 1911 aa15.96■□□□□ 0.14
SRM-203ENST00000465788 CCL15-CCL14A0A0B4J2E2 113 aa15.95■□□□□ 0.14
SRM-203ENST00000465788 CCER2I3L3R5 266 aa15.95■□□□□ 0.14
SRM-203ENST00000465788 CETPP11597 493 aa15.95■□□□□ 0.14
SRM-203ENST00000465788 TAF1CQ15572 869 aaPredicted RBP15.95■□□□□ 0.14
SRM-203ENST00000465788 GRIK5Q16478 980 aa15.95■□□□□ 0.14
SRM-203ENST00000465788 CCL15Q16663 113 aa15.95■□□□□ 0.14
SRM-203ENST00000465788 PRPF38BQ5VTL8 546 aaKnown RBP15.95■□□□□ 0.14
SRM-203ENST00000465788 APOBEC3HQ6NTF7 200 aaKnown RBP15.95■□□□□ 0.14
SRM-203ENST00000465788 ATG9AQ7Z3C6 839 aa15.95■□□□□ 0.14
SRM-203ENST00000465788 ZGPATQ8N5A5 531 aaKnown RBP15.95■□□□□ 0.14
SRM-203ENST00000465788 WRNIP1Q96S55 665 aa15.95■□□□□ 0.14
SRM-203ENST00000465788 PTPN18Q99952 460 aa15.95■□□□□ 0.14
SRM-203ENST00000465788 ZNF341Q9BYN7 854 aa15.95■□□□□ 0.14
SRM-203ENST00000465788 DENND2AQ9ULE3 1009 aa15.95■□□□□ 0.14
SRM-203ENST00000465788 SALL1Q9NSC2 1324 aa15.94■□□□□ 0.14
SRM-203ENST00000465788 KIAA0100Q14667 2235 aaKnown RBP15.94■□□□□ 0.14
SRM-203ENST00000465788 SNAPC2Q13487 334 aa15.94■□□□□ 0.14
SRM-203ENST00000465788 DIEXFQ68CQ4 756 aaKnown RBP15.94■□□□□ 0.14
SRM-203ENST00000465788 FAM151AQ8WW52 585 aa15.94■□□□□ 0.14
SRM-203ENST00000465788 BRI3BPQ8WY22 251 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms