RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 DPCR1Q3MIW9 517 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 ZNF569Q5MCW4 686 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 BEND6Q5SZJ8 279 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 FMR1NBQ8N0W7 255 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 ENGASEQ8NFI3 743 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 STAG1Q8WVM7 1258 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 CCDC51Q96ER9 411 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 YTHDC2Q9H6S0 1430 aaKnown RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 VEZTQ9HBM0 779 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 TRPM3Q9HCF6 1732 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 ATG3Q9NT62 314 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 RAB21Q9UL25 225 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 SUFUQ9UMX1 484 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 L1RE1Q9UN81 338 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 PLCH1Q4KWH8 1693 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 ATP7AQ04656 1500 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 CDK12Q9NYV4 1490 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 PTPDC1A2A3K4 754 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 GOLGA6CA6NDK9 693 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 PES1O00541 588 aaKnown RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 JAK2O60674 1132 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 DDX58O95786 925 aaKnown RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 RHOXF2BP0C7M4 288 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 GOLGA6DP0CG33 693 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 FOSBP53539 338 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 TAF7Q15545 349 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 NME9Q86XW9 330 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 CNGA4Q8IV77 575 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 MLKLQ8NB16 471 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 MSANTD4Q8NCY6 345 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 CAGE1Q8TC20 777 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 NECTIN2Q92692 538 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 DHX58Q96C10 678 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 TCEANC2Q96MN5 208 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 RHOXF2Q9BQY4 288 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 ABCB6Q9NP58 842 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 GOLGA6AQ9NYA3 693 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 MIS18AQ9NYP9 233 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 PCDHA7Q9UN72 937 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 RGPD3A6NKT7 1758 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 RGPD4Q7Z3J3 1758 aa4.42□□□□□ -1.7
CCNL1-204ENST00000464316 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.42□□□□□ -1.7
CCNL1-204ENST00000464316 ADAMTS7Q9UKP4 1686 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 EDC4Q6P2E9 1401 aaKnown RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 KIF3CO14782 793 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 RNF40O75150 1001 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 CDKL5O76039 1030 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 NPM1P06748 294 aaKnown RBP eCLIP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 SSR1P43307 286 aaKnown RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 PSEN1P49768 467 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 LIG3P49916 1009 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 KARSQ15046 597 aaKnown RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 KIAA1328Q86T90 577 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 TMTC1Q8IUR5 882 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 BICC1Q9H694 974 aaKnown RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 KIF1BO60333 1816 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 NHSL1Q5SYE7 1610 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 GNAT3A8MTJ3 354 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 ALDH1L1O75891 902 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 AMPHP49418 695 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 GSCP56915 257 aaPredicted RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 SAFBQ15424 915 aaKnown RBP eCLIP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 LRRC31Q6UY01 552 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 BCAS4Q8TDM0 211 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 PANX2Q96RD6 677 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 LZTFL1Q9NQ48 299 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 POLR3EQ9NVU0 708 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 FAM169AQ9Y6X4 670 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 ARHGEF28Q8N1W1 1705 aaKnown RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 VWA3AA6NCI4 1184 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 GOLGA8KD6RF30 607 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 H3BQF6 201 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 NDUFAB1O14561 156 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 EIF2S2P20042 333 aaKnown RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 FBLN1P23142 703 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 NDUFA8P51970 172 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 SARNPP82979 210 aaKnown RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 MTX1Q13505 466 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 EIF4A2Q14240 407 aaKnown RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 ARHGEF25Q86VW2 580 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 SMARCC2Q8TAQ2 1214 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 NOC3LQ8WTT2 800 aaKnown RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 ZNF274Q96GC6 653 aaPredicted RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 CAPS2Q9BXY5 557 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 BOLA2Q9H3K6 86 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 GNL3LQ9NVN8 582 aaKnown RBP4.41□□□□□ -1.7
CCNL1-204ENST00000464316 CDC42BPGQ6DT37 1551 aa4.41□□□□□ -1.7
CCNL1-204ENST00000464316 ZNF831Q5JPB2 1677 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 ALS2Q96Q42 1657 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 ERBB3P21860 1342 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 GOLGA6BA6NDN3 693 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 PPP1R12AO14974 1030 aaPredicted RBP4.4□□□□□ -1.7
CCNL1-204ENST00000464316 SOX12O15370 315 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 HNRNPH1P31943 449 aaKnown RBP4.4□□□□□ -1.7
CCNL1-204ENST00000464316 CCT5P48643 541 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 TOB2Q14106 344 aaPredicted RBP4.4□□□□□ -1.7
CCNL1-204ENST00000464316 MCMDC2Q4G0Z9 681 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 ANO1Q5XXA6 986 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 WAPLQ7Z5K2 1190 aa4.4□□□□□ -1.7
CCNL1-204ENST00000464316 TICAM2Q86XR7 235 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms