RNA–Protein interactions for RNA: ENST00000463997.1

CAPN2-204, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 2,547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-204ENST00000463997 HOMER1Q86YM7 354 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 RBM12BQ8IXT5 1001 aaKnown RBP5.64□□□□□ -1.51
CAPN2-204ENST00000463997 ATL2Q8NHH9 583 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 PRR7Q8TB68 274 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 EZH1Q92800 747 aaPredicted RBP5.64□□□□□ -1.51
CAPN2-204ENST00000463997 YIPF2Q9BWQ6 316 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 FAM204AQ9H8W3 233 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.64□□□□□ -1.51
CAPN2-204ENST00000463997 USP16Q9Y5T5 823 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 CFTRP13569 1480 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 FHOD3Q2V2M9 1422 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 ATAD2Q6PL18 1390 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 RBM47A0AV96 593 aaKnown RBP5.64□□□□□ -1.51
CAPN2-204ENST00000463997 RTN3O95197 1032 aaPredicted RBP5.64□□□□□ -1.51
CAPN2-204ENST00000463997 TRIM27P14373 513 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 GSPT1P15170 499 aaKnown RBP5.64□□□□□ -1.51
CAPN2-204ENST00000463997 TPP2P29144 1249 aaPredicted RBP5.64□□□□□ -1.51
CAPN2-204ENST00000463997 FNTAP49354 379 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 LAMB3Q13751 1172 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 CAMK4Q16566 473 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 HSP90B2PQ58FF3 399 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 HDGFL1Q5TGJ6 251 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 RCSD1Q6JBY9 416 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 HDXQ7Z353 690 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 KIAA1328Q86T90 577 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 CEP57Q86XR8 500 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 AMOTL1Q8IY63 956 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 BICD2Q8TD16 824 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 SLX1AQ9BQ83 275 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 RANBP17Q9H2T7 1088 aaKnown RBP5.64□□□□□ -1.51
CAPN2-204ENST00000463997 MRFAP1Q9Y605 127 aa5.64□□□□□ -1.51
CAPN2-204ENST00000463997 DISP3Q9P2K9 1392 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 TTC41PQ6P2S7 1318 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 PHLPP2Q6ZVD8 1323 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 COL17A1Q9UMD9 1497 aaPredicted RBP5.63□□□□□ -1.51
CAPN2-204ENST00000463997 CCDC151A5D8V7 595 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 ETF1P62495 437 aaKnown RBP5.63□□□□□ -1.51
CAPN2-204ENST00000463997 CEP85LQ5SZL2 805 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 THEMIS2Q5TEJ8 643 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 VPS53Q5VIR6 699 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 TLDC1Q6P9B6 456 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 CKAP2LQ8IYA6 745 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 CEP112Q8N8E3 955 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 B4GALNT2Q8NHY0 566 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 FAM71BQ8TC56 605 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 LMBR1Q8WVP7 490 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 XAGE2Q96GT9 111 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 INTS4Q96HW7 963 aaKnown RBP5.63□□□□□ -1.51
CAPN2-204ENST00000463997 PRAM1Q96QH2 718 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 HOMER3Q9NSC5 361 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 ZBTB40Q9NUA8 1239 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 RTEL1Q9NZ71 1219 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 DDX20Q9UHI6 824 aaKnown RBP5.63□□□□□ -1.51
CAPN2-204ENST00000463997 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.63□□□□□ -1.51
CAPN2-204ENST00000463997 TUBB4AP04350 444 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 GBP2P32456 591 aaPredicted RBP5.63□□□□□ -1.51
CAPN2-204ENST00000463997 SLC8A3P57103 927 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 BRD3Q15059 726 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 CCDC178Q5BJE1 867 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 OR8K1Q8NGG5 319 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 UTP14AQ9BVJ6 771 aaKnown RBP5.63□□□□□ -1.51
CAPN2-204ENST00000463997 TSGA10Q9BZW7 698 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 NUP62CLQ9H1M0 184 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 CENPHQ9H3R5 247 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 MYO6Q9UM54 1294 aa5.63□□□□□ -1.51
CAPN2-204ENST00000463997 CARMIL1Q5VZK9 1371 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 CCDC141Q6ZP82 1450 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 SYNMO15061 1565 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 PIK3C2GO75747 1445 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 MYL1P05976 194 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 GNAI3P08754 354 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 EZRP15311 586 aaKnown RBP5.62□□□□□ -1.51
CAPN2-204ENST00000463997 ZNF165P49910 485 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 CCDC181Q5TID7 509 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 INTS3Q68E01 1043 aaKnown RBP5.62□□□□□ -1.51
CAPN2-204ENST00000463997 RSRC2Q7L4I2 434 aaKnown RBP5.62□□□□□ -1.51
CAPN2-204ENST00000463997 TRIM42Q8IWZ5 723 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 AFAP1L1Q8TED9 768 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 RABGGTAQ92696 567 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 LZTS2Q9BRK4 669 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 STK31Q9BXU1 1019 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 KLC4Q9NSK0 619 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 MIS18AQ9NYP9 233 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 RRP7AQ9Y3A4 280 aaKnown RBP5.62□□□□□ -1.51
CAPN2-204ENST00000463997 CHMP3Q9Y3E7 222 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 PARP3Q9Y6F1 533 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 BIVM-ERCC5R4GMW8 1640 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 PES1O00541 588 aaKnown RBP5.62□□□□□ -1.51
CAPN2-204ENST00000463997 FANCGO15287 622 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 PPP1R12BO60237 982 aaPredicted RBP5.62□□□□□ -1.51
CAPN2-204ENST00000463997 FSBPO95073 299 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 S1PR4O95977 384 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 RPSAP08865 295 aaKnown RBP5.62□□□□□ -1.51
CAPN2-204ENST00000463997 ZSCAN22P10073 491 aaPredicted RBP5.62□□□□□ -1.51
CAPN2-204ENST00000463997 ALDH1B1P30837 517 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 ZBED6P86452 979 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 PPP2R3AQ06190 1150 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 RASA3Q14644 834 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 FILIP1LQ4L180 1135 aa5.62□□□□□ -1.51
CAPN2-204ENST00000463997 MSS51Q4VC12 460 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms