RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 RNF208Q9H0X6 261 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 SOX13Q9UN79 622 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 MEGF11A6BM72 1044 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 PHACTR2O75167 634 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 TNFRSF21O75509 655 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 ADRB1P08588 477 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 AAMPQ13685 434 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 UBASH3BQ8TF42 649 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 BSNDQ8WZ55 320 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 NXPE3Q969Y0 559 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 C20orf173Q96LM9 149 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 HIF3AQ9Y2N7 669 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 A6NHS1 94 aa4.24□□□□□ -1.73
PTPN22-203ENST00000460620 DDX3YO15523 660 aaKnown RBP4.24□□□□□ -1.73
PTPN22-203ENST00000460620 SART1O43290 800 aaKnown RBP4.24□□□□□ -1.73
PTPN22-203ENST00000460620 ACPPP15309 386 aa4.24□□□□□ -1.73
PTPN22-203ENST00000460620 FKBP4Q02790 459 aaKnown RBP eCLIP4.24□□□□□ -1.73
PTPN22-203ENST00000460620 C19orf57Q0VDD7 668 aa4.24□□□□□ -1.73
PTPN22-203ENST00000460620 RNF43Q68DV7 783 aa4.24□□□□□ -1.73
PTPN22-203ENST00000460620 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-203ENST00000460620 CLEC10AQ8IUN9 316 aa4.24□□□□□ -1.73
PTPN22-203ENST00000460620 OSMRQ99650 979 aa4.24□□□□□ -1.73
PTPN22-203ENST00000460620 RUSC1Q9BVN2 902 aa4.24□□□□□ -1.73
PTPN22-203ENST00000460620 SOX17Q9H6I2 414 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-203ENST00000460620 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.24□□□□□ -1.73
PTPN22-203ENST00000460620 EREGO14944 169 aa4.23□□□□□ -1.73
PTPN22-203ENST00000460620 NFKB2Q00653 900 aa4.23□□□□□ -1.73
PTPN22-203ENST00000460620 IKBKEQ14164 716 aa4.23□□□□□ -1.73
PTPN22-203ENST00000460620 B4GALNT3Q6L9W6 998 aa4.23□□□□□ -1.73
PTPN22-203ENST00000460620 PRRT2Q7Z6L0 340 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-203ENST00000460620 FAM20CQ8IXL6 584 aa4.23□□□□□ -1.73
PTPN22-203ENST00000460620 SLC7A3Q8WY07 619 aa4.23□□□□□ -1.73
PTPN22-203ENST00000460620 FAM83CQ9BQN1 747 aa4.23□□□□□ -1.73
PTPN22-203ENST00000460620 ZKSCAN3Q9BRR0 538 aa4.23□□□□□ -1.73
PTPN22-203ENST00000460620 BHLHE41Q9C0J9 482 aaPredicted RBP4.23□□□□□ -1.73
PTPN22-203ENST00000460620 C7orf69Q9H7B7 122 aa4.23□□□□□ -1.73
PTPN22-203ENST00000460620 CCDC39Q9UFE4 941 aa4.23□□□□□ -1.73
PTPN22-203ENST00000460620 AMOTL2Q9Y2J4 779 aa4.23□□□□□ -1.73
PTPN22-203ENST00000460620 FZD6O60353 706 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 NLRP12P59046 1061 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 MTMR3Q13615 1198 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 PHLDB3Q6NSJ2 640 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 FDX2Q6P4F2 183 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 TRIM42Q8IWZ5 723 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 GJD3Q8N144 294 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 HHIPQ96QV1 700 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 EGFL7Q9UHF1 273 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 USTQ9Y2C2 406 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 SOX1O00570 391 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-203ENST00000460620 TRPA1O75762 1119 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 BMP3P12645 472 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 COL19A1Q14993 1142 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 ZXDCQ2QGD7 858 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-203ENST00000460620 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 VN1R5Q7Z5H4 357 aa4.22□□□□□ -1.73
PTPN22-203ENST00000460620 HMX2A2RU54 273 aa4.21□□□□□ -1.74
PTPN22-203ENST00000460620 GAS2O43903 313 aaKnown RBP4.21□□□□□ -1.74
PTPN22-203ENST00000460620 PREPP48147 710 aa4.21□□□□□ -1.74
PTPN22-203ENST00000460620 BEND4Q6ZU67 534 aa4.21□□□□□ -1.74
PTPN22-203ENST00000460620 SMG8Q8ND04 991 aaKnown RBP4.21□□□□□ -1.74
PTPN22-203ENST00000460620 TMPRSS13Q9BYE2 586 aa4.21□□□□□ -1.74
PTPN22-203ENST00000460620 KCNF1Q9H3M0 494 aa4.21□□□□□ -1.74
PTPN22-203ENST00000460620 SUGCTQ9HAC7 445 aa4.21□□□□□ -1.74
PTPN22-203ENST00000460620 ZFYVE28Q9HCC9 887 aa4.21□□□□□ -1.74
PTPN22-203ENST00000460620 CYP4F12Q9HCS2 524 aa4.21□□□□□ -1.74
PTPN22-203ENST00000460620 FOXD3Q9UJU5 478 aaPredicted RBP4.21□□□□□ -1.74
PTPN22-203ENST00000460620 ABL1P00519 1130 aa4.2□□□□□ -1.74
PTPN22-203ENST00000460620 NEFLP07196 543 aa4.2□□□□□ -1.74
PTPN22-203ENST00000460620 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
PTPN22-203ENST00000460620 NUTM2GQ5VZR2 741 aa4.2□□□□□ -1.74
PTPN22-203ENST00000460620 ASAP3Q8TDY4 903 aa4.2□□□□□ -1.74
PTPN22-203ENST00000460620 C1orf115Q9H7X2 142 aa4.2□□□□□ -1.74
PTPN22-203ENST00000460620 CCDC87Q9NVE4 849 aa4.2□□□□□ -1.74
PTPN22-203ENST00000460620 LOC100289279A0A1B0GTE1 492 aa4.19□□□□□ -1.74
PTPN22-203ENST00000460620 ESRRAP11474 423 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-203ENST00000460620 PEAR1Q5VY43 1037 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-203ENST00000460620 HGSNATQ68CP4 663 aa4.19□□□□□ -1.74
PTPN22-203ENST00000460620 GIMAP7Q8NHV1 300 aa4.19□□□□□ -1.74
PTPN22-203ENST00000460620 FAM168AQ92567 244 aa4.19□□□□□ -1.74
PTPN22-203ENST00000460620 USP26Q9BXU7 913 aa4.19□□□□□ -1.74
PTPN22-203ENST00000460620 ICMTO60725 284 aa4.19□□□□□ -1.74
PTPN22-203ENST00000460620 TIAF1O95411 115 aa4.19□□□□□ -1.74
PTPN22-203ENST00000460620 MAP4P27816 1152 aaKnown RBP4.19□□□□□ -1.74
PTPN22-203ENST00000460620 ZNF211Q13398 564 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-203ENST00000460620 CPSF6Q16630 551 aaKnown RBP eCLIP4.19□□□□□ -1.74
PTPN22-203ENST00000460620 EXOSC6Q5RKV6 272 aaKnown RBP4.19□□□□□ -1.74
PTPN22-203ENST00000460620 HP1BP3Q5SSJ5 553 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-203ENST00000460620 GALNT12Q8IXK2 581 aa4.19□□□□□ -1.74
PTPN22-203ENST00000460620 C12orf50Q8NA57 414 aaPredicted RBP4.19□□□□□ -1.74
PTPN22-203ENST00000460620 SHKBP1Q8TBC3 707 aa4.19□□□□□ -1.74
PTPN22-203ENST00000460620 ZFYVE1Q9HBF4 777 aa4.19□□□□□ -1.74
PTPN22-203ENST00000460620 AKAP8O43823 692 aaKnown RBP4.18□□□□□ -1.74
PTPN22-203ENST00000460620 CCNJLQ8IV13 435 aa4.18□□□□□ -1.74
PTPN22-203ENST00000460620 ANO2Q9NQ90 1003 aa4.18□□□□□ -1.74
PTPN22-203ENST00000460620 LATS2Q9NRM7 1088 aa4.18□□□□□ -1.74
PTPN22-203ENST00000460620 BRPF3Q9ULD4 1205 aa4.18□□□□□ -1.74
PTPN22-203ENST00000460620 A0A096LPE4 126 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 A0A1W2PPZ6 126 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 GSTM4Q03013 218 aa4.17□□□□□ -1.74
PTPN22-203ENST00000460620 PCDH1Q08174 1060 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms