RNA–Protein interactions for RNA: ENST00000455013.2

C1DP3-201, Transcript of C1D nuclear receptor corepressor pseudogene 3, humanhuman

BASIC

Gene C1DP3, Length 423 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1DP3-201ENST00000455013 PTPRAP18433 802 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 BMP6P22004 513 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 GIPRP48546 466 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 ZNF165P49910 485 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 PCDH1Q08174 1060 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 TCEAL1Q15170 157 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 SEZ6Q53EL9 994 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 BNC2Q6ZN30 1099 aaPredicted RBP8.49□□□□□ -1.05
C1DP3-201ENST00000455013 NPAS3Q8IXF0 933 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 HNRNPLLQ8WVV9 542 aaKnown RBP8.49□□□□□ -1.05
C1DP3-201ENST00000455013 TNFRSF25Q93038 417 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 GTPBP3Q969Y2 492 aaKnown RBP8.49□□□□□ -1.05
C1DP3-201ENST00000455013 ANAPC16Q96DE5 110 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 TRERF1Q96PN7 1200 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 SRPK1Q96SB4 655 aaKnown RBP8.49□□□□□ -1.05
C1DP3-201ENST00000455013 POP1Q99575 1024 aaKnown RBP8.49□□□□□ -1.05
C1DP3-201ENST00000455013 ZNRF3Q9ULT6 936 aa8.49□□□□□ -1.05
C1DP3-201ENST00000455013 R3HCC1Q9Y3T6 440 aaKnown RBP8.49□□□□□ -1.05
C1DP3-201ENST00000455013 EIF4EBP3O60516 100 aaPredicted RBP8.48□□□□□ -1.05
C1DP3-201ENST00000455013 CLSTN1O94985 981 aa8.48□□□□□ -1.05
C1DP3-201ENST00000455013 EIF2AK2P19525 551 aaKnown RBP8.48□□□□□ -1.05
C1DP3-201ENST00000455013 EIF6P56537 245 aaKnown RBP8.48□□□□□ -1.05
C1DP3-201ENST00000455013 FOXR1Q6PIV2 292 aa8.48□□□□□ -1.05
C1DP3-201ENST00000455013 REC114Q7Z4M0 266 aa8.48□□□□□ -1.05
C1DP3-201ENST00000455013 CACTIN-AS1Q8N1I8 211 aa8.48□□□□□ -1.05
C1DP3-201ENST00000455013 RBBP8NLQ8NC74 664 aaPredicted RBP8.48□□□□□ -1.05
C1DP3-201ENST00000455013 EMILIN2Q9BXX0 1053 aa8.48□□□□□ -1.05
C1DP3-201ENST00000455013 CCDC113Q9H0I3 377 aa8.48□□□□□ -1.05
C1DP3-201ENST00000455013 TMX1Q9H3N1 280 aa8.48□□□□□ -1.05
C1DP3-201ENST00000455013 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.48□□□□□ -1.05
C1DP3-201ENST00000455013 J3QW42 95 aa8.47□□□□□ -1.05
C1DP3-201ENST00000455013 LLGL2Q6P1M3 1020 aa8.47□□□□□ -1.05
C1DP3-201ENST00000455013 VN1R5Q7Z5H4 357 aa8.47□□□□□ -1.05
C1DP3-201ENST00000455013 SYT9Q86SS6 491 aa8.47□□□□□ -1.05
C1DP3-201ENST00000455013 SULF2Q8IWU5 870 aa8.47□□□□□ -1.05
C1DP3-201ENST00000455013 DDX54Q8TDD1 881 aaKnown RBP8.47□□□□□ -1.05
C1DP3-201ENST00000455013 GAL3ST3Q96A11 431 aa8.47□□□□□ -1.05
C1DP3-201ENST00000455013 BRINP2Q9C0B6 783 aa8.47□□□□□ -1.05
C1DP3-201ENST00000455013 UBE2OQ9C0C9 1292 aaKnown RBP8.47□□□□□ -1.05
C1DP3-201ENST00000455013 FRRS1LQ9P0K9 344 aa8.47□□□□□ -1.05
C1DP3-201ENST00000455013 PRR12Q9ULL5 1215 aa8.47□□□□□ -1.05
C1DP3-201ENST00000455013 PPT2Q9UMR5 302 aa8.47□□□□□ -1.05
C1DP3-201ENST00000455013 SMAD7O15105 426 aaKnown RBP8.46□□□□□ -1.06
C1DP3-201ENST00000455013 MLLT1Q03111 559 aaPredicted RBP8.46□□□□□ -1.06
C1DP3-201ENST00000455013 RASIP1Q5U651 963 aa8.46□□□□□ -1.06
C1DP3-201ENST00000455013 CEP135Q66GS9 1140 aa8.46□□□□□ -1.06
C1DP3-201ENST00000455013 PLD4Q96BZ4 506 aa8.46□□□□□ -1.06
C1DP3-201ENST00000455013 FERD3LQ96RJ6 166 aa8.46□□□□□ -1.06
C1DP3-201ENST00000455013 NXF1Q9UBU9 619 aaKnown RBP8.46□□□□□ -1.06
C1DP3-201ENST00000455013 PCDHB5Q9Y5E4 795 aa8.46□□□□□ -1.06
C1DP3-201ENST00000455013 ADARB2-AS1A8MUL3 147 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 BPNT1O95861 308 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 ARNTP27540 789 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 ZNF252P-AS1Q0IIN9 211 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 AP3B2Q13367 1082 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 ZNF423Q2M1K9 1284 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 PLEKHG4Q58EX7 1191 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 C19orf47Q8N9M1 422 aaKnown RBP8.45□□□□□ -1.06
C1DP3-201ENST00000455013 FBXO27Q8NI29 283 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 TTC9Q92623 222 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 RNPC3Q96LT9 517 aaKnown RBP8.45□□□□□ -1.06
C1DP3-201ENST00000455013 CRBNQ96SW2 442 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 MDFIQ99750 246 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 SOX17Q9H6I2 414 aaPredicted RBP8.45□□□□□ -1.06
C1DP3-201ENST00000455013 EHMT1Q9H9B1 1298 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 ACTR10Q9NZ32 417 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 SLC6A14Q9UN76 642 aa8.45□□□□□ -1.06
C1DP3-201ENST00000455013 TLR3O15455 904 aaKnown RBP8.44□□□□□ -1.06
C1DP3-201ENST00000455013 TRIM37O94972 964 aa8.44□□□□□ -1.06
C1DP3-201ENST00000455013 ATE1O95260 518 aa8.44□□□□□ -1.06
C1DP3-201ENST00000455013 ESRRAP11474 423 aaPredicted RBP8.44□□□□□ -1.06
C1DP3-201ENST00000455013 CASP7P55210 303 aa8.44□□□□□ -1.06
C1DP3-201ENST00000455013 CTBSQ01459 385 aa8.44□□□□□ -1.06
C1DP3-201ENST00000455013 RPL6Q02878 288 aaKnown RBP8.44□□□□□ -1.06
C1DP3-201ENST00000455013 SEPT6Q14141 434 aa8.44□□□□□ -1.06
C1DP3-201ENST00000455013 DDR2Q16832 855 aa8.44□□□□□ -1.06
C1DP3-201ENST00000455013 CCDC81Q6ZN84 652 aa8.44□□□□□ -1.06
C1DP3-201ENST00000455013 HFE2Q6ZVN8 426 aa8.44□□□□□ -1.06
C1DP3-201ENST00000455013 FAM35AQ86V20 835 aa8.44□□□□□ -1.06
C1DP3-201ENST00000455013 FAM169BQ8N8A8 192 aa8.44□□□□□ -1.06
C1DP3-201ENST00000455013 ZNF775Q96BV0 537 aaPredicted RBP8.44□□□□□ -1.06
C1DP3-201ENST00000455013 CACNA2D2Q9NY47 1150 aa8.44□□□□□ -1.06
C1DP3-201ENST00000455013 TERTO14746 1132 aaKnown RBP8.43□□□□□ -1.06
C1DP3-201ENST00000455013 RASGRF1Q13972 1273 aa8.43□□□□□ -1.06
C1DP3-201ENST00000455013 PDZD3Q86UT5 571 aa8.43□□□□□ -1.06
C1DP3-201ENST00000455013 MICALL1Q8N3F8 863 aa8.43□□□□□ -1.06
C1DP3-201ENST00000455013 NANOS1Q8WY41 292 aaKnown RBP8.43□□□□□ -1.06
C1DP3-201ENST00000455013 BRMS1Q9HCU9 246 aa8.43□□□□□ -1.06
C1DP3-201ENST00000455013 NAGPAQ9UK23 515 aa8.43□□□□□ -1.06
C1DP3-201ENST00000455013 FAM221BA6H8Z2 402 aa8.42□□□□□ -1.06
C1DP3-201ENST00000455013 FAM177BA6PVY3 158 aa8.42□□□□□ -1.06
C1DP3-201ENST00000455013 H3BM21 787 aa8.42□□□□□ -1.06
C1DP3-201ENST00000455013 PPFIA3O75145 1194 aa8.42□□□□□ -1.06
C1DP3-201ENST00000455013 ARAFP10398 606 aa8.42□□□□□ -1.06
C1DP3-201ENST00000455013 PERM1Q5SV97 790 aa8.42□□□□□ -1.06
C1DP3-201ENST00000455013 LSRQ86X29 649 aaPredicted RBP8.42□□□□□ -1.06
C1DP3-201ENST00000455013 KCNB2Q92953 911 aa8.42□□□□□ -1.06
C1DP3-201ENST00000455013 BMP4P12644 408 aa8.41□□□□□ -1.06
C1DP3-201ENST00000455013 ADH6P28332 368 aa8.41□□□□□ -1.06
C1DP3-201ENST00000455013 MCM4P33991 863 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms