RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ADGRA1Q86SQ6 560 aa17.37■□□□□ 0.37
SF1-211ENST00000448404 LINC00116Q8NCU8 138 aa17.37■□□□□ 0.37
SF1-211ENST00000448404 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.37■□□□□ 0.37
SF1-211ENST00000448404 SCAND2PQ9GZW5 306 aaPredicted RBP17.37■□□□□ 0.37
SF1-211ENST00000448404 DNAJC25Q9H1X3 360 aa17.37■□□□□ 0.37
SF1-211ENST00000448404 FGFR2P21802 821 aa17.37■□□□□ 0.37
SF1-211ENST00000448404 MCM5P33992 734 aa17.37■□□□□ 0.37
SF1-211ENST00000448404 LCORLQ8N3X6 602 aa17.37■□□□□ 0.37
SF1-211ENST00000448404 CHMP4CQ96CF2 233 aa17.37■□□□□ 0.37
SF1-211ENST00000448404 AKAP11Q9UKA4 1901 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 TCRBV5S4A2TA0A5A2 114 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 ERVV-1B6SEH8 477 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 CHRNDQ07001 517 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 CSPP1Q1MSJ5 1256 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 NCOA7Q8NI08 942 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 LPIN2Q92539 896 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.36■□□□□ 0.376e-7■□□□□ 10.1
SF1-211ENST00000448404 ORC3Q9UBD5 711 aaPredicted RBP17.36■□□□□ 0.37
SF1-211ENST00000448404 ZKSCAN5Q9Y2L8 839 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 CLIC4Q9Y696 253 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 SALL1Q9NSC2 1324 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 TAF1P21675 1872 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 NTSR2O95665 410 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 ZFYP08048 801 aaPredicted RBP17.36■□□□□ 0.37
SF1-211ENST00000448404 CDC27P30260 824 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 SDR42E1Q8WUS8 393 aa17.36■□□□□ 0.37
SF1-211ENST00000448404 ME1P48163 572 aa17.35■□□□□ 0.37
SF1-211ENST00000448404 STRBPQ96SI9 672 aaKnown RBP17.35■□□□□ 0.37
SF1-211ENST00000448404 CTNNA3Q9UI47 895 aa17.35■□□□□ 0.37
SF1-211ENST00000448404 R3HCC1Q9Y3T6 440 aaKnown RBP17.35■□□□□ 0.37
SF1-211ENST00000448404 CYP2D7A0A087X1C5 515 aa17.35■□□□□ 0.37
SF1-211ENST00000448404 CPLX1O14810 134 aa17.35■□□□□ 0.37
SF1-211ENST00000448404 CCAR1Q8IX12 1150 aaKnown RBP17.35■□□□□ 0.37
SF1-211ENST00000448404 A0A1B0GVL5 298 aa17.34■□□□□ 0.37
SF1-211ENST00000448404 CCDC192P0DO97 292 aa17.34■□□□□ 0.37
SF1-211ENST00000448404 ZNF274Q96GC6 653 aaPredicted RBP17.34■□□□□ 0.37
SF1-211ENST00000448404 FBXO3Q9UK99 471 aa17.34■□□□□ 0.37
SF1-211ENST00000448404 ELP1O95163 1332 aa17.34■□□□□ 0.37
SF1-211ENST00000448404 SPATA31A5Q5VU36 1347 aa17.34■□□□□ 0.37
SF1-211ENST00000448404 SPATA31A7Q8IWB4 1347 aa17.34■□□□□ 0.37
SF1-211ENST00000448404 CBX8Q9HC52 389 aa17.34■□□□□ 0.37
SF1-211ENST00000448404 SLC5A1P13866 664 aa17.33■□□□□ 0.36
SF1-211ENST00000448404 ARID4AP29374 1257 aaPredicted RBP17.33■□□□□ 0.36
SF1-211ENST00000448404 CELF1Q92879 486 aaKnown RBP17.33■□□□□ 0.36
SF1-211ENST00000448404 C8orf76Q96K31 380 aa17.33■□□□□ 0.36
SF1-211ENST00000448404 COL14A1Q05707 1796 aaKnown RBP17.33■□□□□ 0.36
SF1-211ENST00000448404 NGLY1Q96IV0 654 aa17.33■□□□□ 0.36
SF1-211ENST00000448404 LRP2BPQ9P2M1 347 aa17.33■□□□□ 0.36
SF1-211ENST00000448404 MARCKSP29966 332 aaPredicted RBP17.32■□□□□ 0.36
SF1-211ENST00000448404 ISM2Q6H9L7 571 aa17.32■□□□□ 0.36
SF1-211ENST00000448404 NFXL1Q6ZNB6 911 aa17.32■□□□□ 0.36
SF1-211ENST00000448404 IFNL3Q8IZI9 196 aa17.32■□□□□ 0.36
SF1-211ENST00000448404 LLPHQ9BRT6 129 aaKnown RBP17.32■□□□□ 0.36
SF1-211ENST00000448404 PDCL3Q9H2J4 239 aa17.32■□□□□ 0.36
SF1-211ENST00000448404 ZSWIM5Q9P217 1185 aa17.32■□□□□ 0.36
SF1-211ENST00000448404 CCDC39Q9UFE4 941 aa17.32■□□□□ 0.36
SF1-211ENST00000448404 NRBP1Q9UHY1 535 aa17.32■□□□□ 0.36
SF1-211ENST00000448404 GTF2E1P29083 439 aaPredicted RBP17.32■□□□□ 0.36
SF1-211ENST00000448404 IGHMBP2P38935 993 aaKnown RBP17.32■□□□□ 0.36
SF1-211ENST00000448404 TRDNQ13061 729 aa17.32■□□□□ 0.36
SF1-211ENST00000448404 TBC1D9BQ66K14 1250 aa17.32■□□□□ 0.36
SF1-211ENST00000448404 C11orf57Q6ZUT1 292 aaPredicted RBP17.32■□□□□ 0.36
SF1-211ENST00000448404 NAPBQ9H115 298 aa17.32■□□□□ 0.36
SF1-211ENST00000448404 CLSTN2Q9H4D0 955 aa17.32■□□□□ 0.36
SF1-211ENST00000448404 hCG_1642624A0A1W2PR95 340 aa17.31■□□□□ 0.36
SF1-211ENST00000448404 HMGN5P82970 282 aaKnown RBP17.31■□□□□ 0.36
SF1-211ENST00000448404 RBM10P98175 930 aaKnown RBP17.31■□□□□ 0.36
SF1-211ENST00000448404 CCDC152Q4G0S7 254 aa17.31■□□□□ 0.36
SF1-211ENST00000448404 TFCP2L1Q9NZI6 479 aa17.31■□□□□ 0.36
SF1-211ENST00000448404 GSG1L2A8MUP6 293 aa17.31■□□□□ 0.36
SF1-211ENST00000448404 MINDY4BA8MYZ0 360 aa17.31■□□□□ 0.36
SF1-211ENST00000448404 PRDM1O75626 825 aa17.31■□□□□ 0.36
SF1-211ENST00000448404 LRRFIP1Q32MZ4 808 aaKnown RBP17.31■□□□□ 0.36
SF1-211ENST00000448404 NAA16Q6N069 864 aaPredicted RBP17.31■□□□□ 0.36
SF1-211ENST00000448404 FSIP1Q8NA03 581 aa17.31■□□□□ 0.36
SF1-211ENST00000448404 PCDHA7Q9UN72 937 aa17.31■□□□□ 0.36
SF1-211ENST00000448404 SLC4A4Q9Y6R1 1079 aa17.31■□□□□ 0.36
SF1-211ENST00000448404 MROH5Q6ZUA9 1318 aa17.3■□□□□ 0.36
SF1-211ENST00000448404 TPM2P07951 284 aa17.3■□□□□ 0.36
SF1-211ENST00000448404 GUCY1A2P33402 732 aa17.3■□□□□ 0.36
SF1-211ENST00000448404 DYNLL1P63167 89 aaKnown RBP17.3■□□□□ 0.36
SF1-211ENST00000448404 UBE3CQ15386 1083 aa17.3■□□□□ 0.36
SF1-211ENST00000448404 ZSCAN16Q9H4T2 348 aaPredicted RBP17.3■□□□□ 0.36
SF1-211ENST00000448404 LETM1O95202 739 aaPredicted RBP17.3■□□□□ 0.36
SF1-211ENST00000448404 SNW1Q13573 536 aaKnown RBP17.3■□□□□ 0.36
SF1-211ENST00000448404 UTRNP46939 3433 aa17.3■□□□□ 0.36
SF1-211ENST00000448404 RANBP6O60518 1105 aaKnown RBP17.29■□□□□ 0.36
SF1-211ENST00000448404 TDO2P48775 406 aa17.29■□□□□ 0.36
SF1-211ENST00000448404 METAP2P50579 478 aaKnown RBP eCLIP17.29■□□□□ 0.361e-7■□□□□ 10.8
SF1-211ENST00000448404 TMEM67Q5HYA8 995 aa17.29■□□□□ 0.36
SF1-211ENST00000448404 APOA5Q6Q788 366 aa17.29■□□□□ 0.36
SF1-211ENST00000448404 CFAP45Q9UL16 551 aa17.29■□□□□ 0.36
SF1-211ENST00000448404 ANGEL1Q9UNK9 670 aaKnown RBP17.29■□□□□ 0.36
SF1-211ENST00000448404 BIN1O00499 593 aa17.29■□□□□ 0.36
SF1-211ENST00000448404 SH2B2O14492 632 aaPredicted RBP17.29■□□□□ 0.36
SF1-211ENST00000448404 MAP3K12Q12852 859 aa17.29■□□□□ 0.36
SF1-211ENST00000448404 TTF1Q15361 905 aaPredicted RBP17.29■□□□□ 0.36
SF1-211ENST00000448404 RAI14Q9P0K7 980 aa17.29■□□□□ 0.36
SF1-211ENST00000448404 CYP7A1P22680 504 aa17.28■□□□□ 0.36
SF1-211ENST00000448404 FBXO18Q8NFZ0 1043 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms