RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CDK19Q9BWU1 502 aa7.49□□□□□ -1.21
SDCBP-205ENST00000447267 ALG2Q9H553 416 aa7.49□□□□□ -1.21
SDCBP-205ENST00000447267 PRM3Q9NNZ6 103 aa7.49□□□□□ -1.21
SDCBP-205ENST00000447267 PPLO60437 1756 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 PALLDQ8WX93 1383 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 POM121CA8CG34 1229 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 LY75O60449 1722 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 INHAP05111 366 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 MSX1P28360 303 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 GDF10P55107 478 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 CPSF1Q10570 1443 aaKnown RBP7.48□□□□□ -1.21
SDCBP-205ENST00000447267 WASHC4Q2M389 1173 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 PPARGC1BQ86YN6 1023 aaKnown RBP7.48□□□□□ -1.21
SDCBP-205ENST00000447267 SYNE4Q8N205 404 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 HACL1Q9UJ83 578 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 PCDHGA11Q9Y5H2 935 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 THSD7BQ9C0I4 1608 aa7.48□□□□□ -1.21
SDCBP-205ENST00000447267 A0A1B0GTH6 734 aa7.47□□□□□ -1.21
SDCBP-205ENST00000447267 H7C1W4 665 aa7.47□□□□□ -1.21
SDCBP-205ENST00000447267 GYS1P13807 737 aa7.47□□□□□ -1.21
SDCBP-205ENST00000447267 IRS1P35568 1242 aa7.47□□□□□ -1.21
SDCBP-205ENST00000447267 TLR1Q15399 786 aa7.47□□□□□ -1.21
SDCBP-205ENST00000447267 TMEM214Q6NUQ4 689 aaKnown RBP7.47□□□□□ -1.21
SDCBP-205ENST00000447267 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.47□□□□□ -1.21
SDCBP-205ENST00000447267 RHBDD1Q8TEB9 315 aa7.47□□□□□ -1.21
SDCBP-205ENST00000447267 RNF186Q9NXI6 227 aa7.47□□□□□ -1.21
SDCBP-205ENST00000447267 KIF1BO60333 1816 aa7.47□□□□□ -1.21
SDCBP-205ENST00000447267 NSD3Q9BZ95 1437 aa7.46□□□□□ -1.21
SDCBP-205ENST00000447267 KIF13BQ9NQT8 1826 aa7.46□□□□□ -1.21
SDCBP-205ENST00000447267 GDF11O95390 407 aa7.46□□□□□ -1.22
SDCBP-205ENST00000447267 EN2P19622 333 aaPredicted RBP7.46□□□□□ -1.22
SDCBP-205ENST00000447267 ATP4AP20648 1035 aa7.46□□□□□ -1.22
SDCBP-205ENST00000447267 DDR1Q08345 913 aa7.46□□□□□ -1.22
SDCBP-205ENST00000447267 SEMA3FQ13275 785 aa7.46□□□□□ -1.22
SDCBP-205ENST00000447267 MAP7D1Q3KQU3 841 aa7.46□□□□□ -1.22
SDCBP-205ENST00000447267 GNASQ5JWF2 1037 aa7.46□□□□□ -1.22
SDCBP-205ENST00000447267 TRAPPC3LQ5T215 181 aa7.46□□□□□ -1.22
SDCBP-205ENST00000447267 MPRIPQ6WCQ1 1025 aa7.46□□□□□ -1.22
SDCBP-205ENST00000447267 C1orf229Q6ZS94 237 aaPredicted RBP7.46□□□□□ -1.22
SDCBP-205ENST00000447267 SAPCD2Q86UD0 394 aa7.46□□□□□ -1.22
SDCBP-205ENST00000447267 TMEM151AQ8N4L1 468 aa7.46□□□□□ -1.22
SDCBP-205ENST00000447267 NDFIP2Q9NV92 336 aa7.46□□□□□ -1.22
SDCBP-205ENST00000447267 DNAAF2Q9NVR5 837 aaKnown RBP7.46□□□□□ -1.22
SDCBP-205ENST00000447267 IQSEC3Q9UPP2 1182 aaPredicted RBP7.46□□□□□ -1.22
SDCBP-205ENST00000447267 ARFGEF1Q9Y6D6 1849 aa7.45□□□□□ -1.22
SDCBP-205ENST00000447267 PIK3C2GO75747 1445 aa7.45□□□□□ -1.22
SDCBP-205ENST00000447267 TOGARAM1Q9Y4F4 1720 aa7.45□□□□□ -1.22
SDCBP-205ENST00000447267 C2CD2LO14523 706 aa7.45□□□□□ -1.22
SDCBP-205ENST00000447267 BCRP11274 1271 aa7.45□□□□□ -1.22
SDCBP-205ENST00000447267 MX2P20592 715 aa7.45□□□□□ -1.22
SDCBP-205ENST00000447267 PLA2G4AP47712 749 aa7.45□□□□□ -1.22
SDCBP-205ENST00000447267 ITPK1Q13572 414 aa7.45□□□□□ -1.22
SDCBP-205ENST00000447267 AKAP4Q5JQC9 854 aa7.45□□□□□ -1.22
SDCBP-205ENST00000447267 TTLL6Q8N841 843 aa7.45□□□□□ -1.22
SDCBP-205ENST00000447267 ITSN1Q15811 1721 aa7.44□□□□□ -1.22
SDCBP-205ENST00000447267 C21orf2O43822 256 aa7.44□□□□□ -1.22
SDCBP-205ENST00000447267 SOX11P35716 441 aa7.44□□□□□ -1.22
SDCBP-205ENST00000447267 FOXR1Q6PIV2 292 aa7.44□□□□□ -1.22
SDCBP-205ENST00000447267 Q7L0L9 218 aa7.44□□□□□ -1.22
SDCBP-205ENST00000447267 ZCRB1Q8TBF4 217 aaKnown RBP7.44□□□□□ -1.22
SDCBP-205ENST00000447267 ANKRD24Q8TF21 1146 aa7.44□□□□□ -1.22
SDCBP-205ENST00000447267 TRERF1Q96PN7 1200 aa7.44□□□□□ -1.22
SDCBP-205ENST00000447267 CFHR5Q9BXR6 569 aa7.44□□□□□ -1.22
SDCBP-205ENST00000447267 SERTAD1Q9UHV2 236 aa7.44□□□□□ -1.22
SDCBP-205ENST00000447267 HDAC9Q9UKV0 1011 aa7.44□□□□□ -1.22
SDCBP-205ENST00000447267 RNF123Q5XPI4 1314 aa7.44□□□□□ -1.22
SDCBP-205ENST00000447267 BRCA1P38398 1863 aaKnown RBP7.43□□□□□ -1.22
SDCBP-205ENST00000447267 SHISA8B8ZZ34 492 aa7.43□□□□□ -1.22
SDCBP-205ENST00000447267 BNIP3LO60238 219 aa7.43□□□□□ -1.22
SDCBP-205ENST00000447267 CELF2O95319 508 aaKnown RBP7.43□□□□□ -1.22
SDCBP-205ENST00000447267 HMGB2P26583 209 aaKnown RBP7.43□□□□□ -1.22
SDCBP-205ENST00000447267 SMTNP53814 917 aa7.43□□□□□ -1.22
SDCBP-205ENST00000447267 KIF23Q02241 960 aaPredicted RBP7.43□□□□□ -1.22
SDCBP-205ENST00000447267 PKN2Q16513 984 aaKnown RBP7.43□□□□□ -1.22
SDCBP-205ENST00000447267 BICDL1Q6ZP65 573 aa7.43□□□□□ -1.22
SDCBP-205ENST00000447267 PNMA8AQ86V59 439 aaPredicted RBP7.43□□□□□ -1.22
SDCBP-205ENST00000447267 ABHD17AQ96GS6 310 aa7.43□□□□□ -1.22
SDCBP-205ENST00000447267 SLC4A9Q96Q91 983 aa7.43□□□□□ -1.22
SDCBP-205ENST00000447267 C5P01031 1676 aa7.43□□□□□ -1.22
SDCBP-205ENST00000447267 CNTNAP5Q8WYK1 1306 aa7.43□□□□□ -1.22
SDCBP-205ENST00000447267 ZNF541Q9H0D2 1346 aa7.43□□□□□ -1.22
SDCBP-205ENST00000447267 C4BP0C0L5 1744 aa7.43□□□□□ -1.22
SDCBP-205ENST00000447267 CACNA1AO00555 2505 aa7.43□□□□□ -1.22
SDCBP-205ENST00000447267 ITGB2P05107 769 aa7.42□□□□□ -1.22
SDCBP-205ENST00000447267 SKIP12755 728 aa7.42□□□□□ -1.22
SDCBP-205ENST00000447267 RFC4P35249 363 aa7.42□□□□□ -1.22
SDCBP-205ENST00000447267 MARSP56192 900 aaKnown RBP7.42□□□□□ -1.22
SDCBP-205ENST00000447267 MAP3K10Q02779 954 aa7.42□□□□□ -1.22
SDCBP-205ENST00000447267 NOGQ13253 232 aa7.42□□□□□ -1.22
SDCBP-205ENST00000447267 MTFR1Q15390 333 aa7.42□□□□□ -1.22
SDCBP-205ENST00000447267 DEPDC4Q8N2C3 294 aa7.42□□□□□ -1.22
SDCBP-205ENST00000447267 LTV1Q96GA3 475 aaPredicted RBP7.42□□□□□ -1.22
SDCBP-205ENST00000447267 UCN2Q96RP3 112 aa7.42□□□□□ -1.22
SDCBP-205ENST00000447267 CRISPLD1Q9H336 500 aa7.42□□□□□ -1.22
SDCBP-205ENST00000447267 SAGE1Q9NXZ1 904 aa7.42□□□□□ -1.22
SDCBP-205ENST00000447267 SRP68Q9UHB9 627 aaKnown RBP7.42□□□□□ -1.22
SDCBP-205ENST00000447267 SLIT3O75094 1523 aa7.42□□□□□ -1.22
SDCBP-205ENST00000447267 LOC102724428A0A0B4J2F2 783 aa7.41□□□□□ -1.22
SDCBP-205ENST00000447267 OIP5O43482 229 aa7.41□□□□□ -1.22
SDCBP-205ENST00000447267 ITGAEP38570 1179 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms