RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TGFBRAP1Q8WUH2 860 aa16.36■□□□□ 0.21
SMARCA4-204ENST00000444061 SEMA3EO15041 775 aa16.36■□□□□ 0.21
SMARCA4-204ENST00000444061 IGKV5-2P06315 115 aa16.36■□□□□ 0.21
SMARCA4-204ENST00000444061 RAB34Q9BZG1 259 aa16.36■□□□□ 0.21
SMARCA4-204ENST00000444061 EIF5P55010 431 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-204ENST00000444061 Q6ZUG5 572 aa16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 LINC00116Q8NCU8 138 aa16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 TAOK3Q9H2K8 898 aa16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 BSDC1Q9NW68 430 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 EZH2Q15910 746 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 RTL9Q8NET4 1388 aa16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 PPFIA3O75145 1194 aa16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 PLS1Q14651 629 aa16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 FNBP4Q8N3X1 1017 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 EPS15P42566 896 aa16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 SMIM5Q71RC9 77 aa16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 SULF1Q8IWU6 871 aa16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 FAM227BQ96M60 508 aa16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 ARHGEF10LQ9HCE6 1279 aa16.35■□□□□ 0.21
SMARCA4-204ENST00000444061 EDC3Q96F86 508 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 ITPK1Q13572 414 aa16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 DHX32Q7L7V1 743 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 ISCA1Q9BUE6 129 aa16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 TMOD4Q9NZQ9 345 aa16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 TMEM266Q2M3C6 531 aa16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 CHST3Q7LGC8 479 aa16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 CCDC125Q86Z20 511 aa16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 CCDC148Q8NFR7 591 aa16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 DCPSQ96C86 337 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 BRIP1Q9BX63 1249 aa16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 ADORA1P30542 326 aa16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 TBC1D32Q96NH3 1257 aa16.34■□□□□ 0.21
SMARCA4-204ENST00000444061 USP48Q86UV5 1035 aa16.33■□□□□ 0.21
SMARCA4-204ENST00000444061 RBM27Q9P2N5 1060 aaKnown RBP16.33■□□□□ 0.21
SMARCA4-204ENST00000444061 ARHGEF28Q8N1W1 1705 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-204ENST00000444061 PRDM1O75626 825 aa16.33■□□□□ 0.2
SMARCA4-204ENST00000444061 RAD17O75943 681 aa16.33■□□□□ 0.2
SMARCA4-204ENST00000444061 BAG4O95429 457 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-204ENST00000444061 SLC15A2Q16348 729 aa16.33■□□□□ 0.2
SMARCA4-204ENST00000444061 PDE6AP16499 860 aa16.33■□□□□ 0.2
SMARCA4-204ENST00000444061 PTPN12Q05209 780 aaKnown RBP16.33■□□□□ 0.2
SMARCA4-204ENST00000444061 HEATR3Q7Z4Q2 680 aa16.32■□□□□ 0.2
SMARCA4-204ENST00000444061 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-204ENST00000444061 IPO7O95373 1038 aaKnown RBP16.32■□□□□ 0.2
SMARCA4-204ENST00000444061 STIM1Q13586 685 aa16.32■□□□□ 0.2
SMARCA4-204ENST00000444061 SLC16A10Q8TF71 515 aa16.32■□□□□ 0.2
SMARCA4-204ENST00000444061 CDHR2Q9BYE9 1310 aa16.32■□□□□ 0.2
SMARCA4-204ENST00000444061 B4E1Z4 1266 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 GJB2P29033 226 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 NECAB1Q8N987 351 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 ZKSCAN3Q9BRR0 538 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 DBNLQ9UJU6 430 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 HAUS7Q99871 368 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 DCAF15Q66K64 600 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 CIAPIN1Q6FI81 312 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 CNTNAP4Q9C0A0 1308 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 BTDP43251 543 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 CEP57L1Q8IYX8 460 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 RRP36Q96EU6 259 aaKnown RBP16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 CSADQ9Y600 493 aa16.31■□□□□ 0.2
SMARCA4-204ENST00000444061 ATP10DQ9P241 1426 aa16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 B4DLN1 442 aa16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 TCP10L2B9ZVM9 353 aa16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 SGSM2O43147 1006 aa16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 LETM1O95202 739 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 MRPL12P52815 198 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 NAPAP54920 295 aa16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 CAVIN1Q6NZI2 390 aaKnown RBP16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 GRIPAP1Q4V328 841 aa16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 SMARCC2Q8TAQ2 1214 aa16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 ALG1Q9BT22 464 aa16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 COA1Q9GZY4 146 aa16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 COL5A2P05997 1499 aaPredicted RBP16.3■□□□□ 0.2
SMARCA4-204ENST00000444061 PARP1P09874 1014 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 SCAND2PQ9GZW5 306 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 SCLT1Q96NL6 688 aa16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 MEGF6O75095 1541 aa16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 NFKBIBQ15653 356 aa16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 USP17L21D6R901 530 aa16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 CAMTA2O94983 1202 aa16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 TMX3Q96JJ7 454 aa16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 CCDC39Q9UFE4 941 aa16.29■□□□□ 0.2
SMARCA4-204ENST00000444061 PATL2C9JE40 543 aaKnown RBP16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 CELF1Q92879 486 aaKnown RBP16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 BEGAINQ9BUH8 593 aa16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 TBC1D2Q9BYX2 928 aa16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 MAGEC2Q9UBF1 373 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 PPP1R12BO60237 982 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 TMEM87BQ96K49 555 aa16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.28■□□□□ 0.23e-6■■■■■ 29.3
SMARCA4-204ENST00000444061 ECM2O94769 699 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 ZNF526Q8TF50 670 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-204ENST00000444061 TNMDQ9H2S6 317 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 232.2 ms