RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 SLC5A1P13866 664 aa14.9□□□□□ -0.02
PDGFB-203ENST00000440375 CACNB3P54284 484 aa14.9□□□□□ -0.02
PDGFB-203ENST00000440375 DGKZQ13574 1117 aa14.9□□□□□ -0.02
PDGFB-203ENST00000440375 MAP3K11Q16584 847 aa14.9□□□□□ -0.02
PDGFB-203ENST00000440375 DIEXFQ68CQ4 756 aaKnown RBP14.9□□□□□ -0.02
PDGFB-203ENST00000440375 TBC1D22AQ8WUA7 517 aa14.9□□□□□ -0.02
PDGFB-203ENST00000440375 LPIN2Q92539 896 aa14.9□□□□□ -0.02
PDGFB-203ENST00000440375 ARHGAP45Q92619 1136 aa14.9□□□□□ -0.02
PDGFB-203ENST00000440375 OTOFQ9HC10 1997 aa14.89□□□□□ -0.03
PDGFB-203ENST00000440375 TCP10L2B9ZVM9 353 aa14.89□□□□□ -0.03
PDGFB-203ENST00000440375 HNRNPUQ00839 825 aaKnown RBP eCLIP14.89□□□□□ -0.03
PDGFB-203ENST00000440375 ATP2B3Q16720 1220 aa14.89□□□□□ -0.03
PDGFB-203ENST00000440375 SPRYD7Q5W111 196 aa14.89□□□□□ -0.03
PDGFB-203ENST00000440375 TEPSINQ96N21 525 aa14.89□□□□□ -0.03
PDGFB-203ENST00000440375 TBC1D8O95759 1140 aa14.88□□□□□ -0.03
PDGFB-203ENST00000440375 ADORA1P30542 326 aa14.88□□□□□ -0.03
PDGFB-203ENST00000440375 SUPT20HL1Q3ZLR7 823 aa14.88□□□□□ -0.03
PDGFB-203ENST00000440375 REM2Q8IYK8 340 aaPredicted RBP14.88□□□□□ -0.03
PDGFB-203ENST00000440375 FRAT1Q92837 279 aaPredicted RBP14.88□□□□□ -0.03
PDGFB-203ENST00000440375 TEKT1Q969V4 418 aa14.88□□□□□ -0.03
PDGFB-203ENST00000440375 CLUAP1Q96AJ1 413 aa14.88□□□□□ -0.03
PDGFB-203ENST00000440375 TMEM39BQ9GZU3 492 aa14.88□□□□□ -0.03
PDGFB-203ENST00000440375 CEP126Q9P2H0 1117 aa14.88□□□□□ -0.03
PDGFB-203ENST00000440375 FBXO3Q9UK99 471 aa14.88□□□□□ -0.03
PDGFB-203ENST00000440375 CCDC85CA6NKD9 419 aa14.87□□□□□ -0.03
PDGFB-203ENST00000440375 PPP1R12BO60237 982 aaPredicted RBP14.87□□□□□ -0.03
PDGFB-203ENST00000440375 USP2O75604 605 aaPredicted RBP14.87□□□□□ -0.03
PDGFB-203ENST00000440375 GJA5P36382 358 aa14.87□□□□□ -0.03
PDGFB-203ENST00000440375 PHKA1P46020 1223 aa14.87□□□□□ -0.03
PDGFB-203ENST00000440375 TM4SF4P48230 202 aa14.87□□□□□ -0.03
PDGFB-203ENST00000440375 HDLBPQ00341 1268 aaKnown RBP14.87□□□□□ -0.03
PDGFB-203ENST00000440375 TNFAIP1Q13829 316 aa14.87□□□□□ -0.03
PDGFB-203ENST00000440375 APOBEC3HQ6NTF7 200 aaKnown RBP14.87□□□□□ -0.03
PDGFB-203ENST00000440375 ATF7IPQ6VMQ6 1270 aa14.87□□□□□ -0.03
PDGFB-203ENST00000440375 WNK4Q96J92 1243 aa14.87□□□□□ -0.03
PDGFB-203ENST00000440375 COPRSQ9NQ92 184 aa14.87□□□□□ -0.03
PDGFB-203ENST00000440375 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.87□□□□□ -0.03
PDGFB-203ENST00000440375 MYH13Q9UKX3 1938 aa14.86□□□□□ -0.03
PDGFB-203ENST00000440375 SRGAP3O43295 1099 aa14.86□□□□□ -0.03
PDGFB-203ENST00000440375 GNAI3P08754 354 aa14.86□□□□□ -0.03
PDGFB-203ENST00000440375 PRDX5P30044 214 aa14.86□□□□□ -0.03
PDGFB-203ENST00000440375 IL15P40933 162 aaPredicted RBP14.86□□□□□ -0.03
PDGFB-203ENST00000440375 SLC10A4Q96EP9 437 aa14.86□□□□□ -0.03
PDGFB-203ENST00000440375 ZDHHC15Q96MV8 337 aa14.86□□□□□ -0.03
PDGFB-203ENST00000440375 R3HDMLQ9H3Y0 253 aa14.86□□□□□ -0.03
PDGFB-203ENST00000440375 IREB2P48200 963 aaKnown RBP14.85□□□□□ -0.03
PDGFB-203ENST00000440375 SREBF2Q12772 1141 aa14.85□□□□□ -0.03
PDGFB-203ENST00000440375 MTX1Q13505 466 aa14.85□□□□□ -0.03
PDGFB-203ENST00000440375 DIXDC1Q155Q3 683 aa14.85□□□□□ -0.03
PDGFB-203ENST00000440375 SUGT1Q9Y2Z0 365 aa14.85□□□□□ -0.03
PDGFB-203ENST00000440375 LAMB1P07942 1786 aa14.84□□□□□ -0.03
PDGFB-203ENST00000440375 IPO8O15397 1037 aaKnown RBP14.84□□□□□ -0.03
PDGFB-203ENST00000440375 TMEM57Q8N5G2 664 aa14.84□□□□□ -0.03
PDGFB-203ENST00000440375 WDR66Q8TBY9 1149 aa14.84□□□□□ -0.03
PDGFB-203ENST00000440375 ZNF296Q8WUU4 475 aaPredicted RBP14.84□□□□□ -0.03
PDGFB-203ENST00000440375 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
PDGFB-203ENST00000440375 ELP3Q9H9T3 547 aa14.84□□□□□ -0.03
PDGFB-203ENST00000440375 HDAC5Q9UQL6 1122 aa14.84□□□□□ -0.03
PDGFB-203ENST00000440375 DAGLAQ9Y4D2 1042 aa14.84□□□□□ -0.03
PDGFB-203ENST00000440375 HTTP42858 3142 aa14.84□□□□□ -0.03
PDGFB-203ENST00000440375 MAST3O60307 1309 aa14.84□□□□□ -0.03
PDGFB-203ENST00000440375 PNMA6EA0A0J9YXQ4 647 aa14.83□□□□□ -0.04
PDGFB-203ENST00000440375 IGF2BP3O00425 579 aaKnown RBP eCLIP14.83□□□□□ -0.04
PDGFB-203ENST00000440375 ZBTB48P10074 688 aaPredicted RBP14.83□□□□□ -0.04
PDGFB-203ENST00000440375 TFCP2Q12800 502 aa14.83□□□□□ -0.04
PDGFB-203ENST00000440375 CCDC102BQ68D86 513 aa14.83□□□□□ -0.04
PDGFB-203ENST00000440375 HHIPL2Q6UWX4 724 aa14.83□□□□□ -0.04
PDGFB-203ENST00000440375 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.83□□□□□ -0.04
PDGFB-203ENST00000440375 ANKRD13AQ8IZ07 590 aa14.83□□□□□ -0.04
PDGFB-203ENST00000440375 MRIQ9BWK5 157 aa14.83□□□□□ -0.04
PDGFB-203ENST00000440375 MANSC4A6NHS7 340 aaPredicted RBP14.82□□□□□ -0.04
PDGFB-203ENST00000440375 GPR25O00155 361 aa14.82□□□□□ -0.04
PDGFB-203ENST00000440375 GNAI2P04899 355 aa14.82□□□□□ -0.04
PDGFB-203ENST00000440375 TNNI2P48788 182 aa14.82□□□□□ -0.04
PDGFB-203ENST00000440375 TIMM10P62072 90 aa14.82□□□□□ -0.04
PDGFB-203ENST00000440375 RASGRF1Q13972 1273 aa14.82□□□□□ -0.04
PDGFB-203ENST00000440375 VGLL4Q14135 290 aa14.82□□□□□ -0.04
PDGFB-203ENST00000440375 ZKSCAN2Q63HK3 967 aa14.82□□□□□ -0.04
PDGFB-203ENST00000440375 CTU1Q7Z7A3 348 aaKnown RBP14.82□□□□□ -0.04
PDGFB-203ENST00000440375 IFNL1Q8IU54 200 aa14.82□□□□□ -0.04
PDGFB-203ENST00000440375 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.82□□□□□ -0.04
PDGFB-203ENST00000440375 GNL3LQ9NVN8 582 aaKnown RBP14.82□□□□□ -0.04
PDGFB-203ENST00000440375 A0A1B0GUL7 405 aa14.81□□□□□ -0.04
PDGFB-203ENST00000440375 UNCXA6NJT0 531 aa14.81□□□□□ -0.04
PDGFB-203ENST00000440375 RLBP1P12271 317 aa14.81□□□□□ -0.04
PDGFB-203ENST00000440375 OPTNQ96CV9 577 aa14.81□□□□□ -0.04
PDGFB-203ENST00000440375 CFHR5Q9BXR6 569 aa14.81□□□□□ -0.04
PDGFB-203ENST00000440375 TMOD2Q9NZR1 351 aa14.81□□□□□ -0.04
PDGFB-203ENST00000440375 DENND2AQ9ULE3 1009 aa14.81□□□□□ -0.04
PDGFB-203ENST00000440375 SALL1Q9NSC2 1324 aa14.81□□□□□ -0.04
PDGFB-203ENST00000440375 SEMA3EO15041 775 aa14.8□□□□□ -0.04
PDGFB-203ENST00000440375 LDHBP07195 334 aaKnown RBP14.8□□□□□ -0.04
PDGFB-203ENST00000440375 NFIAQ12857 509 aa14.8□□□□□ -0.04
PDGFB-203ENST00000440375 FKBP1CQ5VVH2 108 aa14.8□□□□□ -0.04
PDGFB-203ENST00000440375 CDC42EP5Q6NZY7 148 aa14.8□□□□□ -0.04
PDGFB-203ENST00000440375 FAM83AQ86UY5 434 aa14.8□□□□□ -0.04
PDGFB-203ENST00000440375 XAGE2Q96GT9 111 aa14.8□□□□□ -0.04
PDGFB-203ENST00000440375 PTPN18Q99952 460 aa14.8□□□□□ -0.04
PDGFB-203ENST00000440375 C1orf115Q9H7X2 142 aa14.8□□□□□ -0.04
PDGFB-203ENST00000440375 RPAP1Q9BWH6 1393 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms