RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 BCS1LQ9Y276 419 aa12.94□□□□□ -0.34
HIPK2-203ENST00000428878 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.94□□□□□ -0.34
HIPK2-203ENST00000428878 USP17L12C9JPN9 530 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 USP17L21D6R901 530 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 STX6O43752 255 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 NTSR2O95665 410 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 LRP10Q7Z4F1 713 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 DRC7Q8IY82 874 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 LCORLQ8N3X6 602 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 ORC3Q9UBD5 711 aaPredicted RBP12.93□□□□□ -0.34
HIPK2-203ENST00000428878 MARCH6O60337 910 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 KIF2CQ99661 725 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 SYCE3A1L190 88 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 E7EWF7 191 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 H0YIN7 160 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 C21orf2O43822 256 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 KIF3AQ9Y496 699 aa12.93□□□□□ -0.34
HIPK2-203ENST00000428878 ZNF804AQ7Z570 1209 aa12.92□□□□□ -0.34
HIPK2-203ENST00000428878 PDGFDQ9GZP0 370 aaPredicted RBP12.92□□□□□ -0.34
HIPK2-203ENST00000428878 GJA3Q9Y6H8 435 aa12.92□□□□□ -0.34
HIPK2-203ENST00000428878 CASP7P55210 303 aa12.92□□□□□ -0.34
HIPK2-203ENST00000428878 PRKG1Q13976 671 aa12.92□□□□□ -0.34
HIPK2-203ENST00000428878 ANKRD1Q15327 319 aa12.92□□□□□ -0.34
HIPK2-203ENST00000428878 PRR5LQ6MZQ0 368 aa12.92□□□□□ -0.34
HIPK2-203ENST00000428878 WDR33Q9C0J8 1336 aaKnown RBP12.92□□□□□ -0.34
HIPK2-203ENST00000428878 MCM5P33992 734 aa12.92□□□□□ -0.34
HIPK2-203ENST00000428878 ISM2Q6H9L7 571 aa12.92□□□□□ -0.34
HIPK2-203ENST00000428878 ZNF444Q8N0Y2 327 aaPredicted RBP12.92□□□□□ -0.34
HIPK2-203ENST00000428878 ATP6V1DQ9Y5K8 247 aa12.91□□□□□ -0.34
HIPK2-203ENST00000428878 ZFYP08048 801 aaPredicted RBP12.91□□□□□ -0.34
HIPK2-203ENST00000428878 SYT1P21579 422 aa12.91□□□□□ -0.34
HIPK2-203ENST00000428878 METAP2P50579 478 aaKnown RBP eCLIP12.91□□□□□ -0.343e-12■□□□□ 9.4
HIPK2-203ENST00000428878 POTEAQ6S8J7 498 aa12.91□□□□□ -0.34
HIPK2-203ENST00000428878 CKAP2LQ8IYA6 745 aa12.91□□□□□ -0.34
HIPK2-203ENST00000428878 RAD17O75943 681 aa12.9□□□□□ -0.34
HIPK2-203ENST00000428878 RPS6KB1P23443 525 aa12.9□□□□□ -0.34
HIPK2-203ENST00000428878 ADD1P35611 737 aaKnown RBP12.9□□□□□ -0.34
HIPK2-203ENST00000428878 DHX32Q7L7V1 743 aaKnown RBP12.9□□□□□ -0.34
HIPK2-203ENST00000428878 COL23A1Q86Y22 540 aaPredicted RBP12.9□□□□□ -0.34
HIPK2-203ENST00000428878 LMO7Q8WWI1 1683 aa12.9□□□□□ -0.34
HIPK2-203ENST00000428878 STK38Q15208 465 aa12.9□□□□□ -0.34
HIPK2-203ENST00000428878 C8orf76Q96K31 380 aa12.9□□□□□ -0.34
HIPK2-203ENST00000428878 CRNKL1Q9BZJ0 848 aaKnown RBP12.9□□□□□ -0.34
HIPK2-203ENST00000428878 ANKRD2Q9GZV1 360 aa12.9□□□□□ -0.34
HIPK2-203ENST00000428878 FAM196BA6NMK8 535 aa12.9□□□□□ -0.34
HIPK2-203ENST00000428878 SMIM22K7EJ46 135 aa12.9□□□□□ -0.34
HIPK2-203ENST00000428878 SLC3A2P08195 630 aaKnown RBP12.9□□□□□ -0.34
HIPK2-203ENST00000428878 CYP2D6P10635 497 aa12.9□□□□□ -0.34
HIPK2-203ENST00000428878 ZYXQ15942 572 aaKnown RBP12.9□□□□□ -0.34
HIPK2-203ENST00000428878 TEX11Q8IYF3 940 aa12.9□□□□□ -0.34
HIPK2-203ENST00000428878 SPATA32Q96LK8 384 aa12.9□□□□□ -0.34
HIPK2-203ENST00000428878 CWC22Q9HCG8 908 aaKnown RBP12.9□□□□□ -0.34
HIPK2-203ENST00000428878 R3HDM1Q15032 1099 aaKnown RBP12.89□□□□□ -0.35
HIPK2-203ENST00000428878 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
HIPK2-203ENST00000428878 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
HIPK2-203ENST00000428878 TTF2Q9UNY4 1162 aaKnown RBP12.89□□□□□ -0.35
HIPK2-203ENST00000428878 WTAPQ15007 396 aa12.89□□□□□ -0.35
HIPK2-203ENST00000428878 IQCA1Q86XH1 822 aa12.89□□□□□ -0.35
HIPK2-203ENST00000428878 SNX21Q969T3 373 aa12.89□□□□□ -0.35
HIPK2-203ENST00000428878 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
HIPK2-203ENST00000428878 SDF4Q9BRK5 362 aa12.89□□□□□ -0.35
HIPK2-203ENST00000428878 PPIP5K2O43314 1243 aa12.89□□□□□ -0.35
HIPK2-203ENST00000428878 TRIM28Q13263 835 aaKnown RBP12.89□□□□□ -0.35
HIPK2-203ENST00000428878 SAFBQ15424 915 aaKnown RBP eCLIP12.89□□□□□ -0.35
HIPK2-203ENST00000428878 CLEC4GQ6UXB4 293 aa12.89□□□□□ -0.35
HIPK2-203ENST00000428878 LARGE2Q8N3Y3 721 aa12.89□□□□□ -0.35
HIPK2-203ENST00000428878 DYNLL2Q96FJ2 89 aa12.89□□□□□ -0.35
HIPK2-203ENST00000428878 HELLSQ9NRZ9 838 aa12.89□□□□□ -0.35
HIPK2-203ENST00000428878 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 CIAO1O76071 339 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 GYS1P13807 737 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 IFNL3Q8IZI9 196 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 ABCC6O95255 1503 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 ZMYM1Q5SVZ6 1142 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 PHLPP1O60346 1717 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 ZBTB43O43298 467 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 BAG3O95817 575 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 CSF1RP07333 972 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 MARCKSP29966 332 aaPredicted RBP12.88□□□□□ -0.35
HIPK2-203ENST00000428878 ZNF827Q17R98 1081 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 TRIM22Q8IYM9 498 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 ERCC4Q92889 916 aaPredicted RBP12.88□□□□□ -0.35
HIPK2-203ENST00000428878 AOX1Q06278 1338 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 CLRN2A0PK11 232 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 ANAPC15P60006 121 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 GPSM2P81274 684 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 CCDC96Q2M329 555 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 CDC37L1Q7L3B6 337 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 PDILTQ8N807 584 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 SLC44A5Q8NCS7 719 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 FAM84BQ96KN1 310 aaPredicted RBP12.88□□□□□ -0.35
HIPK2-203ENST00000428878 AIFM3Q96NN9 605 aa12.88□□□□□ -0.35
HIPK2-203ENST00000428878 TNS2Q63HR2 1409 aa12.87□□□□□ -0.35
HIPK2-203ENST00000428878 TSPY3P0CV98 308 aa12.87□□□□□ -0.35
HIPK2-203ENST00000428878 TSPY8P0CW00 308 aa12.87□□□□□ -0.35
HIPK2-203ENST00000428878 PDCP20941 246 aa12.87□□□□□ -0.35
HIPK2-203ENST00000428878 BCL2L12Q9HB09 334 aa12.87□□□□□ -0.35
HIPK2-203ENST00000428878 PPEF1O14829 653 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms