RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 TBC1D22AQ8WUA7 517 aa12.85□□□□□ -0.35
ZNF3-208ENST00000428683 ZNF296Q8WUU4 475 aaPredicted RBP12.85□□□□□ -0.35
ZNF3-208ENST00000428683 R3HDMLQ9H3Y0 253 aa12.85□□□□□ -0.35
ZNF3-208ENST00000428683 GPR25O00155 361 aa12.84□□□□□ -0.35
ZNF3-208ENST00000428683 SLC5A1P13866 664 aa12.84□□□□□ -0.35
ZNF3-208ENST00000428683 IREB2P48200 963 aaKnown RBP12.84□□□□□ -0.35
ZNF3-208ENST00000428683 RARSP54136 660 aaKnown RBP12.84□□□□□ -0.35
ZNF3-208ENST00000428683 TNFAIP1Q13829 316 aa12.84□□□□□ -0.35
ZNF3-208ENST00000428683 WNK4Q96J92 1243 aa12.84□□□□□ -0.35
ZNF3-208ENST00000428683 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
ZNF3-208ENST00000428683 PA2G4Q9UQ80 394 aaKnown RBP12.84□□□□□ -0.35
ZNF3-208ENST00000428683 LRRFIP2Q9Y608 721 aaKnown RBP12.84□□□□□ -0.35
ZNF3-208ENST00000428683 SSC5DA1L4H1 1573 aa12.83□□□□□ -0.36
ZNF3-208ENST00000428683 MANSC4A6NHS7 340 aaPredicted RBP12.83□□□□□ -0.36
ZNF3-208ENST00000428683 TNNI2P48788 182 aa12.83□□□□□ -0.36
ZNF3-208ENST00000428683 MLLT1Q03111 559 aaPredicted RBP12.83□□□□□ -0.36
ZNF3-208ENST00000428683 ANKRD13AQ8IZ07 590 aa12.83□□□□□ -0.36
ZNF3-208ENST00000428683 LPIN2Q92539 896 aa12.83□□□□□ -0.36
ZNF3-208ENST00000428683 TEKT1Q969V4 418 aa12.83□□□□□ -0.36
ZNF3-208ENST00000428683 ELP3Q9H9T3 547 aa12.83□□□□□ -0.36
ZNF3-208ENST00000428683 CEP126Q9P2H0 1117 aa12.83□□□□□ -0.36
ZNF3-208ENST00000428683 COL1A1P02452 1464 aaPredicted RBP12.83□□□□□ -0.36
ZNF3-208ENST00000428683 A0A1B0GUL6 1792 aa12.82□□□□□ -0.36
ZNF3-208ENST00000428683 GJA5P36382 358 aa12.82□□□□□ -0.36
ZNF3-208ENST00000428683 RGS19P49795 217 aa12.82□□□□□ -0.36
ZNF3-208ENST00000428683 INHBEP58166 350 aa12.82□□□□□ -0.36
ZNF3-208ENST00000428683 HDLBPQ00341 1268 aaKnown RBP12.82□□□□□ -0.36
ZNF3-208ENST00000428683 TEPSINQ96N21 525 aa12.82□□□□□ -0.36
ZNF3-208ENST00000428683 MEIS3Q99687 375 aa12.82□□□□□ -0.36
ZNF3-208ENST00000428683 FKTNO75072 461 aa12.81□□□□□ -0.36
ZNF3-208ENST00000428683 ZBTB48P10074 688 aaPredicted RBP12.81□□□□□ -0.36
ZNF3-208ENST00000428683 SOX10P56693 466 aa12.81□□□□□ -0.36
ZNF3-208ENST00000428683 ATP2B3Q16720 1220 aa12.81□□□□□ -0.36
ZNF3-208ENST00000428683 APOBEC3HQ6NTF7 200 aaKnown RBP12.81□□□□□ -0.36
ZNF3-208ENST00000428683 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
ZNF3-208ENST00000428683 FRAT1Q92837 279 aaPredicted RBP12.81□□□□□ -0.36
ZNF3-208ENST00000428683 HDAC5Q9UQL6 1122 aa12.81□□□□□ -0.36
ZNF3-208ENST00000428683 TNNQ9UQP3 1299 aa12.81□□□□□ -0.36
ZNF3-208ENST00000428683 AKAP11Q9UKA4 1901 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 UNCXA6NJT0 531 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 IGF2BP3O00425 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
ZNF3-208ENST00000428683 BCAR3O75815 825 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 CIAO1O76071 339 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 ALDH1A1P00352 501 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 MAP3K9P80192 1104 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.8□□□□□ -0.36
ZNF3-208ENST00000428683 WDR66Q8TBY9 1149 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 OPTNQ96CV9 577 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 ZDHHC15Q96MV8 337 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 MRIQ9BWK5 157 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 TMOD2Q9NZR1 351 aa12.8□□□□□ -0.36
ZNF3-208ENST00000428683 ADORA1P30542 326 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 IL15P40933 162 aaPredicted RBP12.79□□□□□ -0.36
ZNF3-208ENST00000428683 PHKA1P46020 1223 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 TIMM10P62072 90 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 INTS3Q68E01 1043 aaKnown RBP12.79□□□□□ -0.36
ZNF3-208ENST00000428683 HHIPL2Q6UWX4 724 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 CLUAP1Q96AJ1 413 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 PTPN18Q99952 460 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 GNL3LQ9NVN8 582 aaKnown RBP12.79□□□□□ -0.36
ZNF3-208ENST00000428683 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 HPS5Q9UPZ3 1129 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 SUGT1Q9Y2Z0 365 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 KIF16BQ96L93 1317 aa12.79□□□□□ -0.36
ZNF3-208ENST00000428683 IPO8O15397 1037 aaKnown RBP12.78□□□□□ -0.36
ZNF3-208ENST00000428683 SRGAP3O43295 1099 aa12.78□□□□□ -0.36
ZNF3-208ENST00000428683 GNAI3P08754 354 aa12.78□□□□□ -0.36
ZNF3-208ENST00000428683 PRDX5P30044 214 aa12.78□□□□□ -0.36
ZNF3-208ENST00000428683 DIXDC1Q155Q3 683 aa12.78□□□□□ -0.36
ZNF3-208ENST00000428683 PKN2Q16513 984 aaKnown RBP12.78□□□□□ -0.36
ZNF3-208ENST00000428683 OTUD7BQ6GQQ9 843 aa12.78□□□□□ -0.36
ZNF3-208ENST00000428683 MIER1Q8N108 512 aa12.78□□□□□ -0.36
ZNF3-208ENST00000428683 CFHR5Q9BXR6 569 aa12.78□□□□□ -0.36
ZNF3-208ENST00000428683 MAST3O60307 1309 aa12.78□□□□□ -0.36
ZNF3-208ENST00000428683 LDHBP07195 334 aaKnown RBP12.77□□□□□ -0.37
ZNF3-208ENST00000428683 TCP10Q12799 353 aa12.77□□□□□ -0.37
ZNF3-208ENST00000428683 TFCP2Q12800 502 aa12.77□□□□□ -0.37
ZNF3-208ENST00000428683 VGLL4Q14135 290 aa12.77□□□□□ -0.37
ZNF3-208ENST00000428683 NOM1Q5C9Z4 860 aaKnown RBP12.77□□□□□ -0.37
ZNF3-208ENST00000428683 CCDC102BQ68D86 513 aa12.77□□□□□ -0.37
ZNF3-208ENST00000428683 MIGA2Q7L4E1 593 aa12.77□□□□□ -0.37
ZNF3-208ENST00000428683 FAM83AQ86UY5 434 aa12.77□□□□□ -0.37
ZNF3-208ENST00000428683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.77□□□□□ -0.37
ZNF3-208ENST00000428683 ZKSCAN4Q969J2 545 aaPredicted RBP12.77□□□□□ -0.37
ZNF3-208ENST00000428683 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
ZNF3-208ENST00000428683 USP40Q9NVE5 1235 aa12.77□□□□□ -0.37
ZNF3-208ENST00000428683 CSADQ9Y600 493 aa12.77□□□□□ -0.37
ZNF3-208ENST00000428683 TESPA1A2RU30 521 aaPredicted RBP12.76□□□□□ -0.37
ZNF3-208ENST00000428683 TRIM27P14373 513 aa12.76□□□□□ -0.37
ZNF3-208ENST00000428683 CRHR2Q13324 411 aa12.76□□□□□ -0.37
ZNF3-208ENST00000428683 CDC42EP5Q6NZY7 148 aa12.76□□□□□ -0.37
ZNF3-208ENST00000428683 MS4A4AQ96JQ5 239 aa12.76□□□□□ -0.37
ZNF3-208ENST00000428683 NEUROD6Q96NK8 337 aa12.76□□□□□ -0.37
ZNF3-208ENST00000428683 DENND2AQ9ULE3 1009 aa12.76□□□□□ -0.37
ZNF3-208ENST00000428683 DAGLAQ9Y4D2 1042 aa12.76□□□□□ -0.37
ZNF3-208ENST00000428683 TRIM17Q9Y577 477 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms