RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 NBPF3Q9H094 633 aa31.51■■■□□ 2.63
SH3GL3-202ENST00000427482 BBOX1O75936 387 aa31.5■■■□□ 2.63
SH3GL3-202ENST00000427482 LCORLQ8N3X6 602 aa31.5■■■□□ 2.63
SH3GL3-202ENST00000427482 EPB41L4AQ9HCS5 686 aaPredicted RBP31.5■■■□□ 2.63
SH3GL3-202ENST00000427482 TIAM2Q8IVF5 1701 aa31.5■■■□□ 2.63
SH3GL3-202ENST00000427482 FGD1P98174 961 aa31.49■■■□□ 2.63
SH3GL3-202ENST00000427482 C15orf52Q6ZUT6 534 aaKnown RBP31.49■■■□□ 2.63
SH3GL3-202ENST00000427482 FBXL16Q8N461 479 aa31.49■■■□□ 2.63
SH3GL3-202ENST00000427482 KIAA1551Q9HCM1 1747 aa31.49■■■□□ 2.63
SH3GL3-202ENST00000427482 LTBP1Q14766 1721 aa31.49■■■□□ 2.63
SH3GL3-202ENST00000427482 TRAK2O60296 914 aa31.49■■■□□ 2.63
SH3GL3-202ENST00000427482 GPSM2P81274 684 aa31.49■■■□□ 2.63
SH3GL3-202ENST00000427482 ADGRA1Q86SQ6 560 aa31.49■■■□□ 2.63
SH3GL3-202ENST00000427482 MB21D2Q8IYB1 491 aaPredicted RBP31.49■■■□□ 2.63
SH3GL3-202ENST00000427482 IFNL3Q8IZI9 196 aa31.49■■■□□ 2.63
SH3GL3-202ENST00000427482 GTF3C6Q969F1 213 aa31.49■■■□□ 2.63
SH3GL3-202ENST00000427482 QSER1Q2KHR3 1735 aa31.48■■■□□ 2.63
SH3GL3-202ENST00000427482 FOXD4L5Q5VV16 416 aaPredicted RBP31.48■■■□□ 2.63
SH3GL3-202ENST00000427482 NCOA7Q8NI08 942 aa31.48■■■□□ 2.63
SH3GL3-202ENST00000427482 FOXD4L4Q8WXT5 416 aaPredicted RBP31.48■■■□□ 2.63
SH3GL3-202ENST00000427482 BRIP1Q9BX63 1249 aa31.48■■■□□ 2.63
SH3GL3-202ENST00000427482 GSG1L2A8MUP6 293 aa31.47■■■□□ 2.63
SH3GL3-202ENST00000427482 MIGA1Q8NAN2 632 aa31.47■■■□□ 2.63
SH3GL3-202ENST00000427482 SYT1P21579 422 aa31.47■■■□□ 2.63
SH3GL3-202ENST00000427482 STK3Q13188 491 aa31.47■■■□□ 2.63
SH3GL3-202ENST00000427482 TBC1D10CQ8IV04 446 aa31.47■■■□□ 2.63
SH3GL3-202ENST00000427482 COL11A2P13942 1736 aaPredicted RBP31.46■■■□□ 2.63
SH3GL3-202ENST00000427482 GSE1Q14687 1217 aa31.46■■■□□ 2.63
SH3GL3-202ENST00000427482 FBXO41Q8TF61 875 aa31.46■■■□□ 2.63
SH3GL3-202ENST00000427482 NAPBQ9H115 298 aa31.46■■■□□ 2.63
SH3GL3-202ENST00000427482 SLC4A4Q9Y6R1 1079 aa31.46■■■□□ 2.63
SH3GL3-202ENST00000427482 WDR19Q8NEZ3 1342 aa31.46■■■□□ 2.63
SH3GL3-202ENST00000427482 STX6O43752 255 aa31.45■■■□□ 2.63
SH3GL3-202ENST00000427482 MCTP1Q6DN14 999 aa31.45■■■□□ 2.63
SH3GL3-202ENST00000427482 RALYLQ86SE5 291 aaKnown RBP31.45■■■□□ 2.63
SH3GL3-202ENST00000427482 PRKAB2O43741 272 aa31.45■■■□□ 2.62
SH3GL3-202ENST00000427482 ATP2B4P23634 1241 aa31.45■■■□□ 2.62
SH3GL3-202ENST00000427482 MCM5P33992 734 aa31.45■■■□□ 2.62
SH3GL3-202ENST00000427482 NAA16Q6N069 864 aaPredicted RBP31.45■■■□□ 2.62
SH3GL3-202ENST00000427482 CHST3Q7LGC8 479 aa31.45■■■□□ 2.62
SH3GL3-202ENST00000427482 ZNF384Q8TF68 577 aa31.45■■■□□ 2.62
SH3GL3-202ENST00000427482 MAGEB6P1A0A0J9YX57 407 aa31.44■■■□□ 2.62
SH3GL3-202ENST00000427482 PFKFB2O60825 505 aa31.44■■■□□ 2.62
SH3GL3-202ENST00000427482 MMP10P09238 476 aa31.44■■■□□ 2.62
SH3GL3-202ENST00000427482 APOBRQ0VD83 1088 aa31.44■■■□□ 2.62
SH3GL3-202ENST00000427482 CHAF1AQ13111 956 aaPredicted RBP31.44■■■□□ 2.62
SH3GL3-202ENST00000427482 TMC4Q7Z404 712 aa31.44■■■□□ 2.62
SH3GL3-202ENST00000427482 NSUN4Q96CB9 384 aaKnown RBP31.43■■■□□ 2.62
SH3GL3-202ENST00000427482 NACAP1Q9BZK3 213 aa31.43■■■□□ 2.62
SH3GL3-202ENST00000427482 PODXL2Q9NZ53 605 aa31.43■■■□□ 2.62
SH3GL3-202ENST00000427482 NSFL1CQ9UNZ2 370 aaKnown RBP31.43■■■□□ 2.62
SH3GL3-202ENST00000427482 PARP3Q9Y6F1 533 aa31.43■■■□□ 2.62
SH3GL3-202ENST00000427482 PRC1O43663 620 aa31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 ZSCAN22P10073 491 aaPredicted RBP31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 DEKP35659 375 aaKnown RBP31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 ZNF804AQ7Z570 1209 aa31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 TDRD7Q8NHU6 1098 aaKnown RBP31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 CAMKK2Q96RR4 588 aa31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 RIOK1Q9BRS2 568 aaKnown RBP31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 UFL1O94874 794 aa31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 ANTXR2P58335 489 aa31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 TRDNQ13061 729 aa31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 TMED8Q6PL24 325 aaPredicted RBP31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 GGA1Q9UJY5 639 aa31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 SALL1Q9NSC2 1324 aa31.42■■■□□ 2.62
SH3GL3-202ENST00000427482 EVCP57679 992 aa31.41■■■□□ 2.62
SH3GL3-202ENST00000427482 MECOMQ03112 1051 aa31.41■■■□□ 2.62
SH3GL3-202ENST00000427482 SKOR2Q2VWA4 1001 aaPredicted RBP31.41■■■□□ 2.62
SH3GL3-202ENST00000427482 TCHHQ07283 1943 aa31.41■■■□□ 2.62
SH3GL3-202ENST00000427482 DTNBO60941 627 aa31.4■■■□□ 2.62
SH3GL3-202ENST00000427482 SCRN1Q12765 414 aa31.4■■■□□ 2.62
SH3GL3-202ENST00000427482 EZH2Q15910 746 aaKnown RBP31.4■■■□□ 2.62
SH3GL3-202ENST00000427482 ZNF274Q96GC6 653 aaPredicted RBP31.4■■■□□ 2.62
SH3GL3-202ENST00000427482 GPR101Q96P66 508 aaPredicted RBP31.4■■■□□ 2.62
SH3GL3-202ENST00000427482 DUOX1Q9NRD9 1551 aa31.4■■■□□ 2.62
SH3GL3-202ENST00000427482 SRGNP10124 158 aa31.4■■■□□ 2.62
SH3GL3-202ENST00000427482 TDO2P48775 406 aa31.4■■■□□ 2.62
SH3GL3-202ENST00000427482 ANO8Q9HCE9 1232 aaPredicted RBP31.4■■■□□ 2.62
SH3GL3-202ENST00000427482 PPEF1O14829 653 aaPredicted RBP31.39■■■□□ 2.62
SH3GL3-202ENST00000427482 PDIA4P13667 645 aaKnown RBP31.39■■■□□ 2.62
SH3GL3-202ENST00000427482 EN1Q05925 392 aaPredicted RBP31.39■■■□□ 2.62
SH3GL3-202ENST00000427482 BAZ2AQ9UIF9 1905 aaKnown RBP31.39■■■□□ 2.62
SH3GL3-202ENST00000427482 IGSF3O75054 1194 aa31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 NPR1P16066 1061 aa31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 PRDX5P30044 214 aa31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 SPTY2D1Q68D10 685 aaPredicted RBP31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 MSL1Q68DK7 614 aa31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 SP8Q8IXZ3 490 aa31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 WDR66Q8TBY9 1149 aa31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 MTMR6Q9Y217 621 aa31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 PDE6BP35913 854 aa31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 SLC15A2Q16348 729 aa31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 CHAMP1Q96JM3 812 aa31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 LLPHQ9BRT6 129 aaKnown RBP31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 LMBRD1Q9NUN5 540 aa31.38■■■□□ 2.61
SH3GL3-202ENST00000427482 NEDD4P46934 1319 aa31.37■■■□□ 2.61
SH3GL3-202ENST00000427482 PDCP20941 246 aa31.37■■■□□ 2.61
SH3GL3-202ENST00000427482 PDIA3P30101 505 aaKnown RBP31.37■■■□□ 2.61
SH3GL3-202ENST00000427482 GPHNQ9NQX3 736 aaPredicted RBP31.37■■■□□ 2.61
SH3GL3-202ENST00000427482 F13A1P00488 732 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms