RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 KLHDC7BQ96G42 594 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 DNAJC25Q9H1X3 360 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 NLRP2Q9NX02 1062 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 ABCC2Q92887 1545 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 ADAM11O75078 769 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 ALX3O95076 343 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 PROCP04070 461 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 NEFLP07196 543 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 ZNF157P51786 506 aaPredicted RBP3.93□□□□□ -1.78
VPS13A-208ENST00000423463 NXPE4Q6UWF7 544 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 FBXO11Q86XK2 927 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 SPOCK3Q9BQ16 436 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 ADAM19Q9H013 955 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 PODXL2Q9NZ53 605 aa3.93□□□□□ -1.78
VPS13A-208ENST00000423463 A0A096LPE4 126 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 A0A1W2PPZ6 126 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 DLL1O00548 723 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 TM4SF5O14894 197 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 CABP4P57796 275 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 IKBKEQ14164 716 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 NPAS4Q8IUM7 802 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 GLIS3Q8NEA6 775 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 BCO2Q9BYV7 579 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 ADCY10Q96PN6 1610 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 SAMD9Q5K651 1589 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 APBA3O96018 575 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 LDHBP07195 334 aaKnown RBP3.92□□□□□ -1.78
VPS13A-208ENST00000423463 FCGRTP55899 365 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 MBTPS1Q14703 1052 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 DTWD1Q8N5C7 304 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 UBASH3BQ8TF42 649 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 FOXD4L4Q8WXT5 416 aaPredicted RBP3.92□□□□□ -1.78
VPS13A-208ENST00000423463 EFCAB5A4FU69 1503 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 KDM5BQ9UGL1 1544 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 PLB1Q6P1J6 1458 aa3.92□□□□□ -1.78
VPS13A-208ENST00000423463 MAPKBP1O60336 1514 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 SOX1O00570 391 aaPredicted RBP3.91□□□□□ -1.78
VPS13A-208ENST00000423463 FBXO24O75426 580 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 CD68P34810 354 aaPredicted RBP3.91□□□□□ -1.78
VPS13A-208ENST00000423463 KIAA0319Q5VV43 1072 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 FAM161BQ96MY7 647 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 OSBPL7Q9BZF2 842 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 SEC31BQ9NQW1 1179 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 LMTK3Q96Q04 1460 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 FHOD3Q2V2M9 1422 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 ABCA8O94911 1581 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 ABCC10Q5T3U5 1492 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 ESRRAP11474 423 aaPredicted RBP3.91□□□□□ -1.78
VPS13A-208ENST00000423463 TMCO4Q5TGY1 634 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 FAM117BQ6P1L5 589 aa3.91□□□□□ -1.78
VPS13A-208ENST00000423463 ALYREFQ86V81 257 aaKnown RBP3.91□□□□□ -1.78
VPS13A-208ENST00000423463 CLEC4MQ9H2X3 399 aaPredicted RBP3.91□□□□□ -1.78
VPS13A-208ENST00000423463 ARHGAP35Q9NRY4 1499 aa3.9□□□□□ -1.78
VPS13A-208ENST00000423463 LOC105371045A0A1W2PR82 267 aa3.9□□□□□ -1.78
VPS13A-208ENST00000423463 IREB2P48200 963 aaKnown RBP3.9□□□□□ -1.78
VPS13A-208ENST00000423463 ATP2B2Q01814 1243 aa3.9□□□□□ -1.78
VPS13A-208ENST00000423463 ZNF423Q2M1K9 1284 aa3.9□□□□□ -1.78
VPS13A-208ENST00000423463 IGF2-ASQ6U949 168 aa3.9□□□□□ -1.78
VPS13A-208ENST00000423463 ACAD11Q709F0 780 aa3.9□□□□□ -1.78
VPS13A-208ENST00000423463 LENG1Q96BZ8 264 aaPredicted RBP3.9□□□□□ -1.78
VPS13A-208ENST00000423463 USP26Q9BXU7 913 aa3.9□□□□□ -1.78
VPS13A-208ENST00000423463 ZNF576Q9H609 170 aa3.9□□□□□ -1.78
VPS13A-208ENST00000423463 FMN1Q68DA7 1419 aa3.9□□□□□ -1.78
VPS13A-208ENST00000423463 ASXL2Q76L83 1435 aa3.9□□□□□ -1.78
VPS13A-208ENST00000423463 PLEKHD1A6NEE1 506 aa3.9□□□□□ -1.79
VPS13A-208ENST00000423463 ECEL1O95672 775 aa3.9□□□□□ -1.79
VPS13A-208ENST00000423463 PIP4K2BP78356 416 aa3.9□□□□□ -1.79
VPS13A-208ENST00000423463 NRG1Q02297 640 aaPredicted RBP3.9□□□□□ -1.79
VPS13A-208ENST00000423463 GSTM4Q03013 218 aa3.9□□□□□ -1.79
VPS13A-208ENST00000423463 PCDH1Q08174 1060 aa3.9□□□□□ -1.79
VPS13A-208ENST00000423463 FAAP100Q0VG06 881 aa3.9□□□□□ -1.79
VPS13A-208ENST00000423463 DTHD1Q6ZMT9 781 aa3.9□□□□□ -1.79
VPS13A-208ENST00000423463 ATP10BO94823 1461 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 CLIP1P30622 1438 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 MSTNO14793 375 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 DLGAP3O95886 979 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 C19orf57Q0VDD7 668 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 DOC2BQ14184 412 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 ADGRE1Q14246 886 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 EAPPQ56P03 285 aaPredicted RBP3.89□□□□□ -1.79
VPS13A-208ENST00000423463 KLHL23Q8NBE8 558 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 NACC1Q96RE7 527 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 DUSP9Q99956 384 aaKnown RBP3.89□□□□□ -1.79
VPS13A-208ENST00000423463 AKAP2Q9Y2D5 859 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 TMEM238LA0A1B0GVL6 79 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 GLB1P16278 677 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 ITPKAP23677 461 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 NOS3P29474 1203 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 GATA4P43694 442 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 DUOXA2Q1HG44 320 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 CACTIN-AS1Q8N1I8 211 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 MEGF10Q96KG7 1140 aa3.89□□□□□ -1.79
VPS13A-208ENST00000423463 CDK11AQ9UQ88 783 aaPredicted RBP3.89□□□□□ -1.79
VPS13A-208ENST00000423463 C9orf172C9J069 976 aa3.88□□□□□ -1.79
VPS13A-208ENST00000423463 ALG1LQ6GMV1 187 aa3.88□□□□□ -1.79
VPS13A-208ENST00000423463 PRPF40BQ6NWY9 871 aaKnown RBP3.88□□□□□ -1.79
VPS13A-208ENST00000423463 TXNRD3Q86VQ6 643 aa3.88□□□□□ -1.79
VPS13A-208ENST00000423463 MAP4K3Q8IVH8 894 aa3.88□□□□□ -1.79
VPS13A-208ENST00000423463 C3orf58Q8NDZ4 430 aa3.88□□□□□ -1.79
VPS13A-208ENST00000423463 FBF1Q8TES7 1133 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms