RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SIL1Q9H173 461 aa13.8□□□□□ -0.2
SSBP3-206ENST00000420121 ZNF70Q9UC06 446 aaPredicted RBP13.8□□□□□ -0.2
SSBP3-206ENST00000420121 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
SSBP3-206ENST00000420121 PPP2R3BQ9Y5P8 575 aa13.8□□□□□ -0.2
SSBP3-206ENST00000420121 MYO1BO43795 1136 aa13.79□□□□□ -0.2
SSBP3-206ENST00000420121 TRPA1O75762 1119 aa13.79□□□□□ -0.2
SSBP3-206ENST00000420121 IFIT1P09914 478 aaKnown RBP13.79□□□□□ -0.2
SSBP3-206ENST00000420121 MTX1Q13505 466 aa13.79□□□□□ -0.2
SSBP3-206ENST00000420121 TTLL12Q14166 644 aaPredicted RBP13.79□□□□□ -0.2
SSBP3-206ENST00000420121 RASA3Q14644 834 aa13.79□□□□□ -0.2
SSBP3-206ENST00000420121 NBPF12Q5TAG4 269 aaPredicted RBP13.79□□□□□ -0.2
SSBP3-206ENST00000420121 VPS37DQ86XT2 251 aa13.79□□□□□ -0.2
SSBP3-206ENST00000420121 CDAN1Q8IWY9 1227 aa13.79□□□□□ -0.2
SSBP3-206ENST00000420121 DZIP1LQ8IYY4 767 aaKnown RBP13.79□□□□□ -0.2
SSBP3-206ENST00000420121 LPIN2Q92539 896 aa13.79□□□□□ -0.2
SSBP3-206ENST00000420121 ABHD8Q96I13 439 aa13.79□□□□□ -0.2
SSBP3-206ENST00000420121 TEPSINQ96N21 525 aa13.79□□□□□ -0.2
SSBP3-206ENST00000420121 TDRD3Q9H7E2 651 aaKnown RBP13.79□□□□□ -0.2
SSBP3-206ENST00000420121 VEZTQ9HBM0 779 aa13.79□□□□□ -0.2
SSBP3-206ENST00000420121 COPRSQ9NQ92 184 aa13.79□□□□□ -0.2
SSBP3-206ENST00000420121 ANGEL1Q9UNK9 670 aaKnown RBP13.79□□□□□ -0.2
SSBP3-206ENST00000420121 SLC5A1P13866 664 aa13.78□□□□□ -0.2
SSBP3-206ENST00000420121 RBM5P52756 815 aaKnown RBP eCLIP13.78□□□□□ -0.2
SSBP3-206ENST00000420121 HDLBPQ00341 1268 aaKnown RBP13.78□□□□□ -0.2
SSBP3-206ENST00000420121 HNRNPUQ00839 825 aaKnown RBP eCLIP13.78□□□□□ -0.2
SSBP3-206ENST00000420121 ATF7IPQ6VMQ6 1270 aa13.78□□□□□ -0.2
SSBP3-206ENST00000420121 ARMC9Q7Z3E5 817 aa13.78□□□□□ -0.2
SSBP3-206ENST00000420121 TBC1D22AQ8WUA7 517 aa13.78□□□□□ -0.2
SSBP3-206ENST00000420121 IL15P40933 162 aaPredicted RBP13.77□□□□□ -0.21
SSBP3-206ENST00000420121 TM4SF4P48230 202 aa13.77□□□□□ -0.21
SSBP3-206ENST00000420121 ATP2B3Q16720 1220 aa13.77□□□□□ -0.21
SSBP3-206ENST00000420121 REM2Q8IYK8 340 aaPredicted RBP13.77□□□□□ -0.21
SSBP3-206ENST00000420121 CLMNQ96JQ2 1002 aa13.77□□□□□ -0.21
SSBP3-206ENST00000420121 MYH2Q9UKX2 1941 aa13.77□□□□□ -0.21
SSBP3-206ENST00000420121 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.77□□□□□ -0.21
SSBP3-206ENST00000420121 USP2O75604 605 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-206ENST00000420121 GNAI3P08754 354 aa13.76□□□□□ -0.21
SSBP3-206ENST00000420121 MKRN3Q13064 507 aaKnown RBP13.76□□□□□ -0.21
SSBP3-206ENST00000420121 SPRYD7Q5W111 196 aa13.76□□□□□ -0.21
SSBP3-206ENST00000420121 APOBEC3HQ6NTF7 200 aaKnown RBP13.76□□□□□ -0.21
SSBP3-206ENST00000420121 ZDHHC15Q96MV8 337 aa13.76□□□□□ -0.21
SSBP3-206ENST00000420121 MRIQ9BWK5 157 aa13.76□□□□□ -0.21
SSBP3-206ENST00000420121 MCOLN1Q9GZU1 580 aa13.76□□□□□ -0.21
SSBP3-206ENST00000420121 CEP126Q9P2H0 1117 aa13.76□□□□□ -0.21
SSBP3-206ENST00000420121 SUGT1Q9Y2Z0 365 aa13.76□□□□□ -0.21
SSBP3-206ENST00000420121 IPO8O15397 1037 aaKnown RBP13.75□□□□□ -0.21
SSBP3-206ENST00000420121 FRAT2O75474 233 aaPredicted RBP13.75□□□□□ -0.21
SSBP3-206ENST00000420121 ADORA1P30542 326 aa13.75□□□□□ -0.21
SSBP3-206ENST00000420121 GJA5P36382 358 aa13.75□□□□□ -0.21
SSBP3-206ENST00000420121 PHKA1P46020 1223 aa13.75□□□□□ -0.21
SSBP3-206ENST00000420121 SUPT20HL1Q3ZLR7 823 aa13.75□□□□□ -0.21
SSBP3-206ENST00000420121 FRAT1Q92837 279 aaPredicted RBP13.75□□□□□ -0.21
SSBP3-206ENST00000420121 TEKT1Q969V4 418 aa13.75□□□□□ -0.21
SSBP3-206ENST00000420121 CLUAP1Q96AJ1 413 aa13.75□□□□□ -0.21
SSBP3-206ENST00000420121 TMEM39BQ9GZU3 492 aa13.75□□□□□ -0.21
SSBP3-206ENST00000420121 HDAC5Q9UQL6 1122 aa13.75□□□□□ -0.21
SSBP3-206ENST00000420121 UNCXA6NJT0 531 aa13.74□□□□□ -0.21
SSBP3-206ENST00000420121 TCP10L2B9ZVM9 353 aa13.74□□□□□ -0.21
SSBP3-206ENST00000420121 SRGAP3O43295 1099 aa13.74□□□□□ -0.21
SSBP3-206ENST00000420121 PPP1R12BO60237 982 aaPredicted RBP13.74□□□□□ -0.21
SSBP3-206ENST00000420121 CACNB3P54284 484 aa13.74□□□□□ -0.21
SSBP3-206ENST00000420121 TNFAIP1Q13829 316 aa13.74□□□□□ -0.21
SSBP3-206ENST00000420121 HHIPL2Q6UWX4 724 aa13.74□□□□□ -0.21
SSBP3-206ENST00000420121 TMEM57Q8N5G2 664 aa13.74□□□□□ -0.21
SSBP3-206ENST00000420121 WDR66Q8TBY9 1149 aa13.74□□□□□ -0.21
SSBP3-206ENST00000420121 WNK4Q96J92 1243 aa13.74□□□□□ -0.21
SSBP3-206ENST00000420121 ZBED9Q6R2W3 1325 aa13.73□□□□□ -0.21
SSBP3-206ENST00000420121 SALL1Q9NSC2 1324 aa13.73□□□□□ -0.21
SSBP3-206ENST00000420121 PNMA6EA0A0J9YXQ4 647 aa13.73□□□□□ -0.21
SSBP3-206ENST00000420121 PRDX5P30044 214 aa13.73□□□□□ -0.21
SSBP3-206ENST00000420121 ZKSCAN2Q63HK3 967 aa13.73□□□□□ -0.21
SSBP3-206ENST00000420121 CFHR5Q9BXR6 569 aa13.73□□□□□ -0.21
SSBP3-206ENST00000420121 R3HDMLQ9H3Y0 253 aa13.73□□□□□ -0.21
SSBP3-206ENST00000420121 MAST3O60307 1309 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 TBC1D8O95759 1140 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 GNAI2P04899 355 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 ZBTB48P10074 688 aaPredicted RBP13.72□□□□□ -0.21
SSBP3-206ENST00000420121 TIMM10P62072 90 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 TFCP2Q12800 502 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 DGKZQ13574 1117 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 DIXDC1Q155Q3 683 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 FKBP1CQ5VVH2 108 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 CCDC102BQ68D86 513 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.72□□□□□ -0.21
SSBP3-206ENST00000420121 SLC10A4Q96EP9 437 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 DAGLAQ9Y4D2 1042 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 AK9Q5TCS8 1911 aa13.72□□□□□ -0.21
SSBP3-206ENST00000420121 MYO5AQ9Y4I1 1855 aaKnown RBP13.72□□□□□ -0.21
SSBP3-206ENST00000420121 RPAP1Q9BWH6 1393 aaPredicted RBP13.71□□□□□ -0.21
SSBP3-206ENST00000420121 DOCK2Q92608 1830 aa13.71□□□□□ -0.21
SSBP3-206ENST00000420121 A0A1B0GUL7 405 aa13.71□□□□□ -0.21
SSBP3-206ENST00000420121 SEMA3EO15041 775 aa13.71□□□□□ -0.21
SSBP3-206ENST00000420121 RLBP1P12271 317 aa13.71□□□□□ -0.21
SSBP3-206ENST00000420121 IREB2P48200 963 aaKnown RBP13.71□□□□□ -0.21
SSBP3-206ENST00000420121 SREBF2Q12772 1141 aa13.71□□□□□ -0.21
SSBP3-206ENST00000420121 FAM83AQ86UY5 434 aa13.71□□□□□ -0.21
SSBP3-206ENST00000420121 ANKRD13AQ8IZ07 590 aa13.71□□□□□ -0.21
SSBP3-206ENST00000420121 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.71□□□□□ -0.21
SSBP3-206ENST00000420121 PDS5AQ29RF7 1337 aaKnown RBP13.7□□□□□ -0.22
SSBP3-206ENST00000420121 MANSC4A6NHS7 340 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms