RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SNAP25P60880 206 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 OCA2Q04671 838 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 HP1BP3Q5SSJ5 553 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 BBOF1Q8ND07 529 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 NLRP7Q8WX94 980 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 LRRC37BQ96QE4 947 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 TRIM45Q9H8W5 580 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 SMCO2A6NFE2 343 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 LSM1O15116 133 aaKnown RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 TUBB4AP04350 444 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 PHKA1P46020 1223 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 ABRQ12979 859 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 NDUFA5Q16718 116 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 DUSP27Q5VZP5 1158 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 RNF207Q6ZRF8 634 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 PLEKHM3Q6ZWE6 761 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 GSDMAQ96QA5 445 aa5.13□□□□□ -1.59
PTPN13-202ENST00000411767 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 UNKQ9C0B0 810 aaKnown RBP5.13□□□□□ -1.59
PTPN13-202ENST00000411767 MED21Q13503 144 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 TTC5Q8N0Z6 440 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 OSCP1Q8WVF1 389 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 PPP1R14BQ96C90 147 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 SCAND2PQ9GZW5 306 aaPredicted RBP5.12□□□□□ -1.59
PTPN13-202ENST00000411767 ME1P48163 572 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 ZMYND11Q15326 602 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 ZC3H12BQ5HYM0 836 aaKnown RBP5.12□□□□□ -1.59
PTPN13-202ENST00000411767 MFN1Q8IWA4 741 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 CSGALNACT2Q8N6G5 542 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 OR9Q1Q8NGQ5 310 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 KIFAP3Q92845 792 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 TUBGCP3Q96CW5 907 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 EFHD1Q9BUP0 239 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 STRN4Q9NRL3 753 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 APOA1P02647 267 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 ITIH3Q06033 890 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 SLC9A5Q14940 896 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 MUM1Q2TAK8 710 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 FSCBQ5H9T9 825 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 RSBN1LQ6PCB5 846 aaPredicted RBP5.12□□□□□ -1.59
PTPN13-202ENST00000411767 GSTA5Q7RTV2 222 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 PHF21AQ96BD5 680 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 NACAP1Q9BZK3 213 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 MYO1BO43795 1136 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 TRAK2O60296 914 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 BAG3O95817 575 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 NPR1P16066 1061 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 ZSCAN23Q3MJ62 389 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 C1orf141Q5JVX7 400 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 CCDC183Q5T5S1 534 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 CALML4Q96GE6 196 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 SAMSN1Q9NSI8 373 aaKnown RBP5.12□□□□□ -1.59
PTPN13-202ENST00000411767 IPO5O00410 1097 aaKnown RBP5.12□□□□□ -1.59
PTPN13-202ENST00000411767 CHGBP05060 677 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 SLC8A3P57103 927 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 E4F1Q66K89 784 aaPredicted RBP5.12□□□□□ -1.59
PTPN13-202ENST00000411767 CCDC186Q7Z3E2 898 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 GOLGA5Q8TBA6 731 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 C9orf78Q9NZ63 289 aaPredicted RBP5.12□□□□□ -1.59
PTPN13-202ENST00000411767 RSPH14Q9UHP6 348 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 KRT10P13645 584 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 SLC9A1P19634 815 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 NR5A1Q13285 461 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 MYSM1Q5VVJ2 828 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 MYCBPQ99417 103 aaPredicted RBP5.12□□□□□ -1.59
PTPN13-202ENST00000411767 CCT7Q99832 543 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 CARD9Q9H257 536 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 TSC22D4Q9Y3Q8 395 aa5.12□□□□□ -1.59
PTPN13-202ENST00000411767 STX6O43752 255 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 GSDMDP57764 484 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 CYTH1Q15438 398 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 TMEM266Q2M3C6 531 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 SH2D4AQ9H788 454 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 SFMBT1Q9UHJ3 866 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 SLC13A4Q9UKG4 626 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 LRRD1A4D1F6 860 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 RSPH10B2B2RC85 870 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 EVI5O60447 810 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 KRT75O95678 551 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 HNRNPCP07910 306 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 RSPH10BP0C881 870 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 AP1S1P61966 158 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 NCBP1Q09161 790 aaKnown RBP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 RPS6KA2Q15349 733 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 RTL3Q8N8U3 475 aaKnown RBP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 MTBPQ96DY7 904 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 KIF2CQ99661 725 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 EPS15L1Q9UBC2 864 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 SCAPERQ9BY12 1400 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 GOLGA8SH3BPF8 625 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 RRP1P56182 461 aaKnown RBP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 KLHL24Q6TFL4 600 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 CERS3Q8IU89 383 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 RPAP2Q8IXW5 612 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 AFAP1Q8N556 730 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 HAUS1Q96CS2 278 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 CHMP2BQ9UQN3 213 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 CAB39Q9Y376 341 aaPredicted RBP5.11□□□□□ -1.59
PTPN13-202ENST00000411767 ANGPT2O15123 496 aa5.11□□□□□ -1.59
PTPN13-202ENST00000411767 PLCB3Q01970 1234 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms