RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CRKP46108 304 aa18.14■□□□□ 0.49
MCF2L-210ENST00000409954 RFX5P48382 616 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-210ENST00000409954 KLHDC4Q8TBB5 520 aa18.14■□□□□ 0.49
MCF2L-210ENST00000409954 LPIN2Q92539 896 aa18.14■□□□□ 0.49
MCF2L-210ENST00000409954 ARHGAP45Q92619 1136 aa18.14■□□□□ 0.49
MCF2L-210ENST00000409954 MLLT1Q03111 559 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-210ENST00000409954 MKRN3Q13064 507 aaKnown RBP18.13■□□□□ 0.49
MCF2L-210ENST00000409954 CHAF1AQ13111 956 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-210ENST00000409954 ANKRD13AQ8IZ07 590 aa18.13■□□□□ 0.49
MCF2L-210ENST00000409954 IQSEC3Q9UPP2 1182 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-210ENST00000409954 CASP8AP2Q9UKL3 1982 aa18.13■□□□□ 0.49
MCF2L-210ENST00000409954 GPR25O00155 361 aa18.12■□□□□ 0.49
MCF2L-210ENST00000409954 CIAO1O76071 339 aa18.12■□□□□ 0.49
MCF2L-210ENST00000409954 SLC5A1P13866 664 aa18.12■□□□□ 0.49
MCF2L-210ENST00000409954 WDR66Q8TBY9 1149 aa18.12■□□□□ 0.49
MCF2L-210ENST00000409954 ZNF296Q8WUU4 475 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-210ENST00000409954 TEKT1Q969V4 418 aa18.12■□□□□ 0.49
MCF2L-210ENST00000409954 CEP126Q9P2H0 1117 aa18.12■□□□□ 0.49
MCF2L-210ENST00000409954 RARSP54136 660 aaKnown RBP18.11■□□□□ 0.49
MCF2L-210ENST00000409954 OTUD7BQ6GQQ9 843 aa18.11■□□□□ 0.49
MCF2L-210ENST00000409954 ATG9AQ7Z3C6 839 aa18.11■□□□□ 0.49
MCF2L-210ENST00000409954 FZD1Q9UP38 647 aa18.11■□□□□ 0.49
MCF2L-210ENST00000409954 MAST3O60307 1309 aa18.11■□□□□ 0.49
MCF2L-210ENST00000409954 ZNF646O15015 1829 aaPredicted RBP18.1■□□□□ 0.49
MCF2L-210ENST00000409954 IPO8O15397 1037 aaKnown RBP18.1■□□□□ 0.49
MCF2L-210ENST00000409954 FKBP1CQ5VVH2 108 aa18.1■□□□□ 0.49
MCF2L-210ENST00000409954 HHIPL2Q6UWX4 724 aa18.1■□□□□ 0.49
MCF2L-210ENST00000409954 WNK4Q96J92 1243 aa18.1■□□□□ 0.49
MCF2L-210ENST00000409954 ZDHHC15Q96MV8 337 aa18.1■□□□□ 0.49
MCF2L-210ENST00000409954 GNL3LQ9NVN8 582 aaKnown RBP18.1■□□□□ 0.49
MCF2L-210ENST00000409954 AOX1Q06278 1338 aa18.09■□□□□ 0.49
MCF2L-210ENST00000409954 TCP10L2B9ZVM9 353 aa18.09■□□□□ 0.49
MCF2L-210ENST00000409954 FKTNO75072 461 aa18.09■□□□□ 0.49
MCF2L-210ENST00000409954 IL15P40933 162 aaPredicted RBP18.09■□□□□ 0.49
MCF2L-210ENST00000409954 MAP3K9P80192 1104 aa18.09■□□□□ 0.49
MCF2L-210ENST00000409954 GRIK5Q16478 980 aa18.09■□□□□ 0.49
MCF2L-210ENST00000409954 IFNL1Q8IU54 200 aa18.09■□□□□ 0.49
MCF2L-210ENST00000409954 HOOK2Q96ED9 719 aa18.09■□□□□ 0.49
MCF2L-210ENST00000409954 CLMNQ96JQ2 1002 aa18.09■□□□□ 0.49
MCF2L-210ENST00000409954 TEPSINQ96N21 525 aa18.09■□□□□ 0.49
MCF2L-210ENST00000409954 TMOD2Q9NZR1 351 aa18.09■□□□□ 0.49
MCF2L-210ENST00000409954 GNAI3P08754 354 aa18.08■□□□□ 0.48
MCF2L-210ENST00000409954 INTS3Q68E01 1043 aaKnown RBP18.08■□□□□ 0.48
MCF2L-210ENST00000409954 FAM83AQ86UY5 434 aa18.08■□□□□ 0.48
MCF2L-210ENST00000409954 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.08■□□□□ 0.48
MCF2L-210ENST00000409954 AKAP11Q9UKA4 1901 aa18.08■□□□□ 0.48
MCF2L-210ENST00000409954 ZBTB22O15209 634 aa18.07■□□□□ 0.48
MCF2L-210ENST00000409954 APOBEC3HQ6NTF7 200 aaKnown RBP18.07■□□□□ 0.48
MCF2L-210ENST00000409954 TMEM39BQ9GZU3 492 aa18.07■□□□□ 0.48
MCF2L-210ENST00000409954 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
MCF2L-210ENST00000409954 TESPA1A2RU30 521 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-210ENST00000409954 SEMA3EO15041 775 aa18.06■□□□□ 0.48
MCF2L-210ENST00000409954 ATP2B3Q16720 1220 aa18.06■□□□□ 0.48
MCF2L-210ENST00000409954 SIL1Q9H173 461 aa18.06■□□□□ 0.48
MCF2L-210ENST00000409954 LRRFIP2Q9Y608 721 aaKnown RBP18.06■□□□□ 0.48
MCF2L-210ENST00000409954 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.05■□□□□ 0.48
MCF2L-210ENST00000409954 DENND2AQ9ULE3 1009 aa18.05■□□□□ 0.48
MCF2L-210ENST00000409954 CSADQ9Y600 493 aa18.05■□□□□ 0.48
MCF2L-210ENST00000409954 FBXO46Q6PJ61 603 aaPredicted RBP18.04■□□□□ 0.48
MCF2L-210ENST00000409954 OPTNQ96CV9 577 aa18.04■□□□□ 0.48
MCF2L-210ENST00000409954 R3HDMLQ9H3Y0 253 aa18.04■□□□□ 0.48
MCF2L-210ENST00000409954 HPS5Q9UPZ3 1129 aa18.04■□□□□ 0.48
MCF2L-210ENST00000409954 SSC5DA1L4H1 1573 aa18.04■□□□□ 0.48
MCF2L-210ENST00000409954 GTF2A2P52657 109 aa18.03■□□□□ 0.48
MCF2L-210ENST00000409954 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.03■□□□□ 0.48
MCF2L-210ENST00000409954 MEIS3Q99687 375 aa18.03■□□□□ 0.48
MCF2L-210ENST00000409954 ELP3Q9H9T3 547 aa18.03■□□□□ 0.48
MCF2L-210ENST00000409954 AKAP2Q9Y2D5 859 aa18.03■□□□□ 0.48
MCF2L-210ENST00000409954 IGF2BP3O00425 579 aaKnown RBP eCLIP18.02■□□□□ 0.48
MCF2L-210ENST00000409954 LDHBP07195 334 aaKnown RBP18.02■□□□□ 0.48
MCF2L-210ENST00000409954 GJA5P36382 358 aa18.02■□□□□ 0.48
MCF2L-210ENST00000409954 MTX1Q13505 466 aa18.02■□□□□ 0.48
MCF2L-210ENST00000409954 DCAF15Q66K64 600 aa18.02■□□□□ 0.48
MCF2L-210ENST00000409954 ZGPATQ8N5A5 531 aaKnown RBP18.02■□□□□ 0.48
MCF2L-210ENST00000409954 FAM151AQ8WW52 585 aa18.02■□□□□ 0.48
MCF2L-210ENST00000409954 MS4A4AQ96JQ5 239 aa18.02■□□□□ 0.48
MCF2L-210ENST00000409954 PA2G4Q9UQ80 394 aaKnown RBP18.02■□□□□ 0.48
MCF2L-210ENST00000409954 A0A1B0GUL6 1792 aa18.02■□□□□ 0.47
MCF2L-210ENST00000409954 SALL1Q9NSC2 1324 aa18.01■□□□□ 0.47
MCF2L-210ENST00000409954 CACNB3P54284 484 aa18.01■□□□□ 0.47
MCF2L-210ENST00000409954 ATF7IPQ6VMQ6 1270 aa18.01■□□□□ 0.47
MCF2L-210ENST00000409954 PTPN18Q99952 460 aa18.01■□□□□ 0.47
MCF2L-210ENST00000409954 SRGAP3O43295 1099 aa18■□□□□ 0.47
MCF2L-210ENST00000409954 WDHD1O75717 1129 aaPredicted RBP18■□□□□ 0.47
MCF2L-210ENST00000409954 TIMM10P62072 90 aa18■□□□□ 0.47
MCF2L-210ENST00000409954 VGLL4Q14135 290 aa18■□□□□ 0.47
MCF2L-210ENST00000409954 ARHGEF6Q15052 776 aa18■□□□□ 0.47
MCF2L-210ENST00000409954 CCDC102BQ68D86 513 aa18■□□□□ 0.47
MCF2L-210ENST00000409954 ERO1BQ86YB8 467 aa18■□□□□ 0.47
MCF2L-210ENST00000409954 CDAN1Q8IWY9 1227 aa18■□□□□ 0.47
MCF2L-210ENST00000409954 ERO1AQ96HE7 468 aa18■□□□□ 0.47
MCF2L-210ENST00000409954 GNAI2P04899 355 aa17.99■□□□□ 0.47
MCF2L-210ENST00000409954 PHKA1P46020 1223 aa17.99■□□□□ 0.47
MCF2L-210ENST00000409954 SPTY2D1Q68D10 685 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-210ENST00000409954 SLF2Q8IX21 1173 aa17.99■□□□□ 0.47
MCF2L-210ENST00000409954 FRAT1Q92837 279 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-210ENST00000409954 DAGLAQ9Y4D2 1042 aa17.99■□□□□ 0.47
MCF2L-210ENST00000409954 CCL15-CCL14A0A0B4J2E2 113 aa17.98■□□□□ 0.47
MCF2L-210ENST00000409954 SPDYE5A6NIY4 337 aa17.98■□□□□ 0.47
MCF2L-210ENST00000409954 TRIM27P14373 513 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms