RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 SH3BP2P78314 561 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 MTMR1Q13613 665 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 C1orf127Q8N9H9 656 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 IP6K2Q9UHH9 426 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 EHBP1L1Q8N3D4 1523 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 ASXL2Q76L83 1435 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 NRDCO43847 1150 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 GRM2Q14416 872 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 TTC39BQ5VTQ0 682 aaPredicted RBP4.84□□□□□ -1.63
CCDC178-204ENST00000403303 ALKBH2Q6NS38 261 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.84□□□□□ -1.63
CCDC178-204ENST00000403303 BICDL1Q6ZP65 573 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 SMC5Q8IY18 1101 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 ASAP3Q8TDY4 903 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 FEZ1Q99689 392 aa4.84□□□□□ -1.63
CCDC178-204ENST00000403303 GNL3LQ9NVN8 582 aaKnown RBP4.84□□□□□ -1.63
CCDC178-204ENST00000403303 PREX1Q8TCU6 1659 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 LMTK3Q96Q04 1460 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 MLH3Q9UHC1 1453 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 PDPK1O15530 556 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 AKAP10O43572 662 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 RAG1P15918 1043 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 CDK8P49336 464 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 DDR2Q16832 855 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 IGFLR1Q9H665 355 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 AS3MTQ9HBK9 375 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 GPAMQ9HCL2 828 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 MAP3K20Q9NYL2 800 aaKnown RBP4.84□□□□□ -1.64
CCDC178-204ENST00000403303 PCDHB5Q9Y5E4 795 aa4.84□□□□□ -1.64
CCDC178-204ENST00000403303 LMTK2Q8IWU2 1503 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 WASLO00401 505 aaPredicted RBP4.83□□□□□ -1.64
CCDC178-204ENST00000403303 TSPAN6O43657 245 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 DXOO77932 396 aaKnown RBP4.83□□□□□ -1.64
CCDC178-204ENST00000403303 BPNT1O95861 308 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 MT-CO1P00395 513 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 GRIN2CQ14957 1233 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 ZYXQ15942 572 aaKnown RBP4.83□□□□□ -1.64
CCDC178-204ENST00000403303 CCDC184Q52MB2 194 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 ARSJQ5FYB0 599 aaPredicted RBP4.83□□□□□ -1.64
CCDC178-204ENST00000403303 ABTB2Q8N961 1025 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 NSUN5Q96P11 429 aaKnown RBP4.83□□□□□ -1.64
CCDC178-204ENST00000403303 NBPF3Q9H094 633 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 SHANK2Q9UPX8 1470 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 PIK3C2BO00750 1634 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 SERTM1A2A2V5 107 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 GOLGA8CPA6NN73 597 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 ID4P47928 161 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 PTPN5P54829 565 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 PLEKHG4Q58EX7 1191 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 HOMER1Q86YM7 354 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 MYO1HQ8N1T3 1032 aa4.83□□□□□ -1.64
CCDC178-204ENST00000403303 EML1O00423 815 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 F13A1P00488 732 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 PGRP06401 933 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 TBC1D8BQ0IIM8 1120 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 CRBNQ96SW2 442 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 TRIM8Q9BZR9 551 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 ZFYVE16Q7Z3T8 1539 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 UNC13BO14795 1591 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 UBAP1LF5GYI3 381 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 PTMSP20962 102 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 IDH3AP50213 366 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 LONRF3Q496Y0 759 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 CCDC181Q5TID7 509 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 FOXB2Q5VYV0 432 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 TDRD10Q5VZ19 366 aaKnown RBP4.82□□□□□ -1.64
CCDC178-204ENST00000403303 EHBP1Q8NDI1 1231 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 SHDQ96IW2 340 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 OXCT2Q9BYC2 517 aaPredicted RBP4.82□□□□□ -1.64
CCDC178-204ENST00000403303 CBX8Q9HC52 389 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 GPN3Q9UHW5 284 aaPredicted RBP4.82□□□□□ -1.64
CCDC178-204ENST00000403303 FAM205CA6NFA0 338 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 IL2RAP01589 272 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 NR3C2P08235 984 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 DTHD1Q6ZMT9 781 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 C16orf86Q6ZW13 317 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 SUPT6HQ7KZ85 1726 aaKnown RBP4.82□□□□□ -1.64
CCDC178-204ENST00000403303 NIM1KQ8IY84 436 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 TARS2Q9BW92 718 aaKnown RBP4.82□□□□□ -1.64
CCDC178-204ENST00000403303 VPS45Q9NRW7 570 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 FAM8A1Q9UBU6 413 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 TAGLN3Q9UI15 199 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 KIAA1107Q9UPP5 1409 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 VPS9D1Q9Y2B5 631 aa4.82□□□□□ -1.64
CCDC178-204ENST00000403303 COL17A1Q9UMD9 1497 aaPredicted RBP4.81□□□□□ -1.64
CCDC178-204ENST00000403303 CCER2I3L3R5 266 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 IFIT2P09913 472 aaKnown RBP4.81□□□□□ -1.64
CCDC178-204ENST00000403303 PPP1R26Q5T8A7 1209 aaPredicted RBP4.81□□□□□ -1.64
CCDC178-204ENST00000403303 ERMP1Q7Z2K6 904 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 EHD4Q9H223 541 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 ACTR10Q9NZ32 417 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 CHMP3Q9Y3E7 222 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 IQGAP3Q86VI3 1631 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 NCOA2Q15596 1464 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 CEP162Q5TB80 1403 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 ENPP3O14638 875 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 PLIN1O60240 522 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 PCSK2P16519 638 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 LMNB1P20700 586 aa4.81□□□□□ -1.64
CCDC178-204ENST00000403303 CDC27P30260 824 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms