RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 PAF1Q8N7H5 531 aa7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 TRIM6Q9C030 488 aaPredicted RBP7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 TRMT1Q9NXH9 659 aaKnown RBP7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 ACAD8Q9UKU7 415 aa7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 MAFFQ9ULX9 164 aa7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 ABCC4O15439 1325 aa7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 CBX1P83916 185 aa7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 ADCY2Q08462 1091 aa7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 FAM212AQ96EL1 285 aa7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 RASSF4Q9H2L5 321 aa7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 COMMD8Q9NX08 183 aa7.62□□□□□ -1.19
TM9SF4-202ENST00000398022 ATG7O95352 703 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 SEPT2Q15019 361 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 SYNE3Q6ZMZ3 975 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 KIAA1958Q8N8K9 716 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 SVIPQ8NHG7 77 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 ATRIPQ8WXE1 791 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 MKS1Q9NXB0 559 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 POLKQ9UBT6 870 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 SLC45A1Q9Y2W3 748 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 KIAA1551Q9HCM1 1747 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 CDKL5O76039 1030 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 BAG4O95429 457 aaKnown RBP7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 ALDH1B1P30837 517 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 IQCEQ6IPM2 695 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 MYOCDQ8IZQ8 938 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 DHX36Q9H2U1 1008 aaKnown RBP7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 UNC45AQ9H3U1 944 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 MBIPQ9NS73 344 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 CPSF2Q9P2I0 782 aaKnown RBP7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 USP21Q9UK80 565 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 N6AMT1Q9Y5N5 214 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 IBTKQ9P2D0 1353 aaPredicted RBP7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 ABCC6O95255 1503 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 IMPDH2P12268 514 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 SH3BGRP55822 239 aaPredicted RBP7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 PDCD2Q16342 344 aaPredicted RBP7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 MCTP2Q6DN12 878 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 NFXL1Q6ZNB6 911 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 RPAP2Q8IXW5 612 aaPredicted RBP7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 COG3Q96JB2 828 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 GINM1Q9NU53 330 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 HOXC10Q9NYD6 342 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 UQCRHLA0A096LP55 91 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 BOLA2-SMG1P6H3BVE0 249 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 PRC1O43663 620 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 UQCRHP07919 91 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 KANK3Q6NY19 840 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 CLEC17AQ6ZS10 378 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 MYLK4Q86YV6 388 aaPredicted RBP7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 TRIM11Q96F44 468 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 CDHR1Q96JP9 859 aa7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 TRPC5Q9UL62 973 aaPredicted RBP7.61□□□□□ -1.19
TM9SF4-202ENST00000398022 SLC27A2O14975 620 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 MSL3P1P0C860 447 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 POU5F1BQ06416 359 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 MAPRE1Q15691 268 aaKnown RBP7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 NCAPG2Q86XI2 1143 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 RPUSD2Q8IZ73 545 aaKnown RBP7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 NLGN1Q8N2Q7 840 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 THUMPD2Q9BTF0 503 aaKnown RBP7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 DCTPP1Q9H773 170 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 TOGARAM1Q9Y4F4 1720 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 PLEKHG3A1L390 1219 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 TMEM110-MUSTN1A8MSY1 372 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 KRT38O76015 456 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 PDE4DQ08499 809 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 VPS72Q15906 364 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 CCDC178Q5BJE1 867 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 TTC22Q5TAA0 569 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 MCTP1Q6DN14 999 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 KCNV1Q6PIU1 500 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 PLPP6Q8IY26 295 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 SAMD14Q8IZD0 417 aaPredicted RBP7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 STK11IPQ8N1F8 1099 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 GIMAP1Q8WWP7 306 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 TATDN2Q93075 761 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 BCL9O00512 1426 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 RPL17P18621 184 aaKnown RBP7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 IL4RP24394 825 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 TSPYL6Q8N831 410 aa7.6□□□□□ -1.19
TM9SF4-202ENST00000398022 RGPD2P0DJD1 1756 aa7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 RBP3P10745 1247 aa7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 UNC5CLQ8IV45 518 aa7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 PLEKHM2Q8IWE5 1019 aa7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 RBM12BQ8IXT5 1001 aaKnown RBP7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 PHACTR3Q96KR7 559 aa7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 MPHOSPH6Q99547 160 aaKnown RBP7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 LDHAP00338 332 aaKnown RBP7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 MMEP08473 750 aa7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 MYBL2P10244 700 aa7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 TCEAL1Q15170 157 aa7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 DHX38Q92620 1227 aaKnown RBP7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 RBM42Q9BTD8 480 aaKnown RBP7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 GJA3Q9Y6H8 435 aa7.59□□□□□ -1.19
TM9SF4-202ENST00000398022 NUTM2BA6NNL0 878 aaPredicted RBP7.59□□□□□ -1.2
TM9SF4-202ENST00000398022 NUTM2EB1AL46 878 aaPredicted RBP7.59□□□□□ -1.2
TM9SF4-202ENST00000398022 RWDD2BP57060 319 aa7.59□□□□□ -1.2
TM9SF4-202ENST00000398022 MYSM1Q5VVJ2 828 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms