RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 SPRYD7Q5W111 196 aa23.54■■□□□ 1.36
MCF2L-207ENST00000397024 INTS3Q68E01 1043 aaKnown RBP23.54■■□□□ 1.36
MCF2L-207ENST00000397024 ARAP2Q8WZ64 1704 aa23.53■■□□□ 1.36
MCF2L-207ENST00000397024 BCAR3O75815 825 aa23.53■■□□□ 1.36
MCF2L-207ENST00000397024 CDAN1Q8IWY9 1227 aa23.53■■□□□ 1.36
MCF2L-207ENST00000397024 TBC1D22AQ8WUA7 517 aa23.53■■□□□ 1.36
MCF2L-207ENST00000397024 LPIN2Q92539 896 aa23.53■■□□□ 1.36
MCF2L-207ENST00000397024 SLC10A4Q96EP9 437 aa23.53■■□□□ 1.36
MCF2L-207ENST00000397024 KIF16BQ96L93 1317 aa23.53■■□□□ 1.36
MCF2L-207ENST00000397024 CCDC85CA6NKD9 419 aa23.52■■□□□ 1.36
MCF2L-207ENST00000397024 PPP1R12BO60237 982 aaPredicted RBP23.52■■□□□ 1.36
MCF2L-207ENST00000397024 CIAO1O76071 339 aa23.52■■□□□ 1.36
MCF2L-207ENST00000397024 TBC1D8O95759 1140 aa23.52■■□□□ 1.36
MCF2L-207ENST00000397024 SLC5A1P13866 664 aa23.52■■□□□ 1.36
MCF2L-207ENST00000397024 TEPSINQ96N21 525 aa23.52■■□□□ 1.36
MCF2L-207ENST00000397024 TCP10L2B9ZVM9 353 aa23.51■■□□□ 1.35
MCF2L-207ENST00000397024 HDLBPQ00341 1268 aaKnown RBP23.51■■□□□ 1.35
MCF2L-207ENST00000397024 CEP126Q9P2H0 1117 aa23.51■■□□□ 1.35
MCF2L-207ENST00000397024 FBXO3Q9UK99 471 aa23.51■■□□□ 1.35
MCF2L-207ENST00000397024 TRIM27P14373 513 aa23.49■■□□□ 1.35
MCF2L-207ENST00000397024 CACNB3P54284 484 aa23.49■■□□□ 1.35
MCF2L-207ENST00000397024 ATP2B3Q16720 1220 aa23.49■■□□□ 1.35
MCF2L-207ENST00000397024 TEKT1Q969V4 418 aa23.49■■□□□ 1.35
MCF2L-207ENST00000397024 MRIQ9BWK5 157 aa23.49■■□□□ 1.35
MCF2L-207ENST00000397024 TMEM39BQ9GZU3 492 aa23.49■■□□□ 1.35
MCF2L-207ENST00000397024 R3HDMLQ9H3Y0 253 aa23.49■■□□□ 1.35
MCF2L-207ENST00000397024 COPRSQ9NQ92 184 aa23.49■■□□□ 1.35
MCF2L-207ENST00000397024 TNFAIP1Q13829 316 aa23.48■■□□□ 1.35
MCF2L-207ENST00000397024 DIEXFQ68CQ4 756 aaKnown RBP23.48■■□□□ 1.35
MCF2L-207ENST00000397024 APOBEC3HQ6NTF7 200 aaKnown RBP23.48■■□□□ 1.35
MCF2L-207ENST00000397024 WNK4Q96J92 1243 aa23.48■■□□□ 1.35
MCF2L-207ENST00000397024 HDAC5Q9UQL6 1122 aa23.48■■□□□ 1.35
MCF2L-207ENST00000397024 GJA5P36382 358 aa23.47■■□□□ 1.35
MCF2L-207ENST00000397024 IL15P40933 162 aaPredicted RBP23.47■■□□□ 1.35
MCF2L-207ENST00000397024 SREBF2Q12772 1141 aa23.47■■□□□ 1.35
MCF2L-207ENST00000397024 FRAT1Q92837 279 aaPredicted RBP23.47■■□□□ 1.35
MCF2L-207ENST00000397024 ZDHHC15Q96MV8 337 aa23.47■■□□□ 1.35
MCF2L-207ENST00000397024 SUGT1Q9Y2Z0 365 aa23.47■■□□□ 1.35
MCF2L-207ENST00000397024 GNAI3P08754 354 aa23.46■■□□□ 1.35
MCF2L-207ENST00000397024 ADORA1P30542 326 aa23.46■■□□□ 1.35
MCF2L-207ENST00000397024 IREB2P48200 963 aaKnown RBP23.46■■□□□ 1.35
MCF2L-207ENST00000397024 ATF7IPQ6VMQ6 1270 aa23.46■■□□□ 1.35
MCF2L-207ENST00000397024 WDR66Q8TBY9 1149 aa23.46■■□□□ 1.35
MCF2L-207ENST00000397024 CLUAP1Q96AJ1 413 aa23.46■■□□□ 1.35
MCF2L-207ENST00000397024 UNCXA6NJT0 531 aa23.45■■□□□ 1.34
MCF2L-207ENST00000397024 IPO8O15397 1037 aaKnown RBP23.45■■□□□ 1.34
MCF2L-207ENST00000397024 PHKA1P46020 1223 aa23.45■■□□□ 1.34
MCF2L-207ENST00000397024 HNRNPUQ00839 825 aaKnown RBP eCLIP23.45■■□□□ 1.34
MCF2L-207ENST00000397024 ZNF296Q8WUU4 475 aaPredicted RBP23.45■■□□□ 1.34
MCF2L-207ENST00000397024 ZBTB48P10074 688 aaPredicted RBP23.44■■□□□ 1.34
MCF2L-207ENST00000397024 TIMM10P62072 90 aa23.44■■□□□ 1.34
MCF2L-207ENST00000397024 HHIPL2Q6UWX4 724 aa23.44■■□□□ 1.34
MCF2L-207ENST00000397024 ANKRD13AQ8IZ07 590 aa23.44■■□□□ 1.34
MCF2L-207ENST00000397024 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.44■■□□□ 1.34
MCF2L-207ENST00000397024 MANSC4A6NHS7 340 aaPredicted RBP23.43■■□□□ 1.34
MCF2L-207ENST00000397024 GPR25O00155 361 aa23.43■■□□□ 1.34
MCF2L-207ENST00000397024 SRGAP3O43295 1099 aa23.43■■□□□ 1.34
MCF2L-207ENST00000397024 TNNI2P48788 182 aa23.43■■□□□ 1.34
MCF2L-207ENST00000397024 MTX1Q13505 466 aa23.43■■□□□ 1.34
MCF2L-207ENST00000397024 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.43■■□□□ 1.34
MCF2L-207ENST00000397024 CTU1Q7Z7A3 348 aaKnown RBP23.43■■□□□ 1.34
MCF2L-207ENST00000397024 MYH13Q9UKX3 1938 aa23.43■■□□□ 1.34
MCF2L-207ENST00000397024 IGF2BP3O00425 579 aaKnown RBP eCLIP23.42■■□□□ 1.34
MCF2L-207ENST00000397024 PRDX5P30044 214 aa23.42■■□□□ 1.34
MCF2L-207ENST00000397024 DIXDC1Q155Q3 683 aa23.42■■□□□ 1.34
MCF2L-207ENST00000397024 IFNL1Q8IU54 200 aa23.42■■□□□ 1.34
MCF2L-207ENST00000397024 CFHR5Q9BXR6 569 aa23.42■■□□□ 1.34
MCF2L-207ENST00000397024 ELP3Q9H9T3 547 aa23.42■■□□□ 1.34
MCF2L-207ENST00000397024 MAST3O60307 1309 aa23.41■■□□□ 1.34
MCF2L-207ENST00000397024 INHBEP58166 350 aa23.41■■□□□ 1.34
MCF2L-207ENST00000397024 TFCP2Q12800 502 aa23.41■■□□□ 1.34
MCF2L-207ENST00000397024 CNKSR2Q8WXI2 1034 aa23.41■■□□□ 1.34
MCF2L-207ENST00000397024 GNL3LQ9NVN8 582 aaKnown RBP23.41■■□□□ 1.34
MCF2L-207ENST00000397024 OTOFQ9HC10 1997 aa23.41■■□□□ 1.34
MCF2L-207ENST00000397024 FKBP1CQ5VVH2 108 aa23.4■■□□□ 1.34
MCF2L-207ENST00000397024 CCDC102BQ68D86 513 aa23.4■■□□□ 1.34
MCF2L-207ENST00000397024 TMEM57Q8N5G2 664 aa23.4■■□□□ 1.34
MCF2L-207ENST00000397024 DAGLAQ9Y4D2 1042 aa23.4■■□□□ 1.34
MCF2L-207ENST00000397024 PNMA6EA0A0J9YXQ4 647 aa23.39■■□□□ 1.33
MCF2L-207ENST00000397024 GNAI2P04899 355 aa23.39■■□□□ 1.33
MCF2L-207ENST00000397024 RGS19P49795 217 aa23.39■■□□□ 1.33
MCF2L-207ENST00000397024 MAP3K9P80192 1104 aa23.39■■□□□ 1.33
MCF2L-207ENST00000397024 NOM1Q5C9Z4 860 aaKnown RBP23.39■■□□□ 1.33
MCF2L-207ENST00000397024 FAM83AQ86UY5 434 aa23.39■■□□□ 1.33
MCF2L-207ENST00000397024 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.39■■□□□ 1.33
MCF2L-207ENST00000397024 PTPN18Q99952 460 aa23.39■■□□□ 1.33
MCF2L-207ENST00000397024 DENND2AQ9ULE3 1009 aa23.39■■□□□ 1.33
MCF2L-207ENST00000397024 VGLL4Q14135 290 aa23.38■■□□□ 1.33
MCF2L-207ENST00000397024 ZKSCAN2Q63HK3 967 aa23.38■■□□□ 1.33
MCF2L-207ENST00000397024 CDC42EP5Q6NZY7 148 aa23.38■■□□□ 1.33
MCF2L-207ENST00000397024 OPTNQ96CV9 577 aa23.38■■□□□ 1.33
MCF2L-207ENST00000397024 TMOD2Q9NZR1 351 aa23.38■■□□□ 1.33
MCF2L-207ENST00000397024 SALL1Q9NSC2 1324 aa23.37■■□□□ 1.33
MCF2L-207ENST00000397024 A0A1B0GUL7 405 aa23.37■■□□□ 1.33
MCF2L-207ENST00000397024 SEMA3EO15041 775 aa23.37■■□□□ 1.33
MCF2L-207ENST00000397024 ALDH1A1P00352 501 aa23.37■■□□□ 1.33
MCF2L-207ENST00000397024 LDHBP07195 334 aaKnown RBP23.37■■□□□ 1.33
MCF2L-207ENST00000397024 XAGE2Q96GT9 111 aa23.37■■□□□ 1.33
MCF2L-207ENST00000397024 MS4A4AQ96JQ5 239 aa23.37■■□□□ 1.33
MCF2L-207ENST00000397024 LAMB1P07942 1786 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms