RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 MYL5Q02045 173 aa18.93■□□□□ 0.62
EFEMP1-202ENST00000394555 AXDND1Q5T1B0 1012 aaPredicted RBP18.93■□□□□ 0.62
EFEMP1-202ENST00000394555 ANKRD13DQ6ZTN6 518 aa18.93■□□□□ 0.62
EFEMP1-202ENST00000394555 IKBKBO14920 756 aa18.93■□□□□ 0.62
EFEMP1-202ENST00000394555 CBFA2T2O43439 604 aa18.93■□□□□ 0.62
EFEMP1-202ENST00000394555 HELLSQ9NRZ9 838 aa18.93■□□□□ 0.62
EFEMP1-202ENST00000394555 TPM1P09493 284 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 CMA1P23946 247 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 PPP2R3AQ06190 1150 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 GPS2Q13227 327 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 LMBR1LQ6UX01 489 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 ARFGAP3Q9NP61 516 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 FEZ2Q9UHY8 353 aaPredicted RBP18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 KCNA6P17658 529 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 PARD6BQ9BYG5 372 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 MAST3O60307 1309 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 ADKP55263 362 aaKnown RBP18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 PSME1Q06323 249 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 VSTM4Q8IW00 320 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 AIFM3Q96NN9 605 aa18.92■□□□□ 0.62
EFEMP1-202ENST00000394555 ANKARQ7Z5J8 1434 aa18.91■□□□□ 0.62
EFEMP1-202ENST00000394555 KARSQ15046 597 aaKnown RBP18.91■□□□□ 0.62
EFEMP1-202ENST00000394555 SLIT1O75093 1534 aa18.91■□□□□ 0.62
EFEMP1-202ENST00000394555 HSP90AB3PQ58FF7 597 aa18.91■□□□□ 0.62
EFEMP1-202ENST00000394555 ZMYM1Q5SVZ6 1142 aa18.91■□□□□ 0.62
EFEMP1-202ENST00000394555 OLFM4Q6UX06 510 aa18.91■□□□□ 0.62
EFEMP1-202ENST00000394555 CLIC6Q96NY7 704 aa18.91■□□□□ 0.62
EFEMP1-202ENST00000394555 BAG1Q99933 345 aaPredicted RBP18.91■□□□□ 0.62
EFEMP1-202ENST00000394555 DESI2Q9BSY9 194 aa18.91■□□□□ 0.62
EFEMP1-202ENST00000394555 PHF8Q9UPP1 1060 aa18.91■□□□□ 0.62
EFEMP1-202ENST00000394555 LAMA4Q16363 1823 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 M0R2C6 588 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 LMAN1P49257 510 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 FKBP4Q02790 459 aaKnown RBP eCLIP18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 ZSCAN26Q16670 478 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 TOGARAM2Q6ZUX3 1019 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 UBR1Q8IWV7 1749 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 HEG1Q9ULI3 1381 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 ARHGAP6O43182 974 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 PRC1O43663 620 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 PDE4CQ08493 712 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 WASHC4Q2M389 1173 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 BRAPQ7Z569 592 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 GPR161Q8N6U8 529 aaKnown RBP18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 CCDC191Q8NCU4 936 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 ZNF790Q6PG37 636 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 MPHOSPH8Q99549 860 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 TBX22Q9Y458 520 aa18.9■□□□□ 0.62
EFEMP1-202ENST00000394555 DHX16O60231 1041 aaKnown RBP18.89■□□□□ 0.61
EFEMP1-202ENST00000394555 IFIT1P09914 478 aaKnown RBP18.89■□□□□ 0.61
EFEMP1-202ENST00000394555 KIF23Q02241 960 aaPredicted RBP18.89■□□□□ 0.61
EFEMP1-202ENST00000394555 ABCC6O95255 1503 aa18.89■□□□□ 0.61
EFEMP1-202ENST00000394555 RXRAP19793 462 aa18.89■□□□□ 0.61
EFEMP1-202ENST00000394555 TNNT3P45378 269 aaPredicted RBP18.89■□□□□ 0.61
EFEMP1-202ENST00000394555 DHX58Q96C10 678 aa18.89■□□□□ 0.61
EFEMP1-202ENST00000394555 CHMP4CQ96CF2 233 aa18.89■□□□□ 0.61
EFEMP1-202ENST00000394555 IRX2Q9BZI1 471 aaPredicted RBP18.89■□□□□ 0.61
EFEMP1-202ENST00000394555 RFX7Q2KHR2 1363 aa18.89■□□□□ 0.61
EFEMP1-202ENST00000394555 RNF113AO15541 343 aaKnown RBP18.88■□□□□ 0.61
EFEMP1-202ENST00000394555 MAP3K9P80192 1104 aa18.88■□□□□ 0.61
EFEMP1-202ENST00000394555 SPECC1Q5M775 1068 aa18.88■□□□□ 0.61
EFEMP1-202ENST00000394555 SHC4Q6S5L8 630 aa18.88■□□□□ 0.61
EFEMP1-202ENST00000394555 C10orf67Q8IYJ2 551 aa18.88■□□□□ 0.61
EFEMP1-202ENST00000394555 SLC39A14Q15043 492 aa18.88■□□□□ 0.61
EFEMP1-202ENST00000394555 TMEM139Q8IV31 216 aa18.88■□□□□ 0.61
EFEMP1-202ENST00000394555 NFATC2IPQ8NCF5 419 aa18.88■□□□□ 0.61
EFEMP1-202ENST00000394555 CCDC12Q8WUD4 166 aaPredicted RBP18.88■□□□□ 0.61
EFEMP1-202ENST00000394555 OSBP2Q969R2 916 aa18.88■□□□□ 0.61
EFEMP1-202ENST00000394555 INTS13Q9NVM9 706 aa18.88■□□□□ 0.61
EFEMP1-202ENST00000394555 ATP8B1O43520 1251 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 STK11IPQ8N1F8 1099 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 HPS5Q9UPZ3 1129 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 MRFAP1Q9Y605 127 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 RGPD2P0DJD1 1756 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 TRIM66O15016 1216 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 FOXN1O15353 648 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 PDE4BQ07343 736 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 ANKRD24Q8TF21 1146 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 FUT8Q9BYC5 575 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 UBXN6Q9BZV1 441 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 LCMT1Q9UIC8 334 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 TUBE1Q9UJT0 475 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 CDC27P30260 824 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 MCM6Q14566 821 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 LONRF3Q496Y0 759 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 CNNM3Q8NE01 707 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 ADAM21Q9UKJ8 722 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 PCDHA5Q9Y5H7 936 aa18.87■□□□□ 0.61
EFEMP1-202ENST00000394555 LTN1O94822 1766 aa18.86■□□□□ 0.61
EFEMP1-202ENST00000394555 MRC1P22897 1456 aa18.86■□□□□ 0.61
EFEMP1-202ENST00000394555 IMMTQ16891 758 aaKnown RBP18.86■□□□□ 0.61
EFEMP1-202ENST00000394555 ZNF496Q96IT1 587 aaPredicted RBP18.86■□□□□ 0.61
EFEMP1-202ENST00000394555 ZNF594Q96JF6 807 aaPredicted RBP18.86■□□□□ 0.61
EFEMP1-202ENST00000394555 TSPYL1Q9H0U9 437 aa18.86■□□□□ 0.61
EFEMP1-202ENST00000394555 PUF60Q9UHX1 559 aaKnown RBP18.86■□□□□ 0.61
EFEMP1-202ENST00000394555 SLC20A2Q08357 652 aa18.86■□□□□ 0.61
EFEMP1-202ENST00000394555 LONRF2Q1L5Z9 754 aa18.86■□□□□ 0.61
EFEMP1-202ENST00000394555 RALYLQ86SE5 291 aaKnown RBP18.86■□□□□ 0.61
EFEMP1-202ENST00000394555 FOXP4Q8IVH2 680 aaPredicted RBP18.86■□□□□ 0.61
EFEMP1-202ENST00000394555 GOLGA1Q92805 767 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms