RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 OLFML1Q6UWY5 402 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 TRMT10CQ7L0Y3 403 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 SH3BP5LQ7L8J4 393 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 CHMP7Q8WUX9 453 aaPredicted RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 SELENOOQ9BVL4 669 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 CNGB3Q9NQW8 809 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 TSPYL4Q9UJ04 414 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 FAM169AQ9Y6X4 670 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 SETD5Q9C0A6 1442 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 SLC3A2P08195 630 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 PIP4K2BP78356 416 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 RCN2Q14257 317 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 AKIRIN2Q53H80 203 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 BLOC1S2Q6QNY1 142 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 API5Q9BZZ5 524 aaKnown RBP3.67□□□□□ -1.82
PHF3-202ENST00000393387 BCL2L12Q9HB09 334 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 PLCB1Q9NQ66 1216 aa3.67□□□□□ -1.82
PHF3-202ENST00000393387 LMNAP02545 664 aaKnown RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 STX17P56962 302 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 FKBP4Q02790 459 aaKnown RBP eCLIP3.66□□□□□ -1.82
PHF3-202ENST00000393387 NLRP9Q7RTR0 991 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 RAPGEF5Q92565 580 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 TRIM47Q96LD4 638 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 KIF2CQ99661 725 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 SH2D4AQ9H788 454 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 IL1RAPL2Q9NP60 686 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 SCOCQ9UIL1 159 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 ZNF229Q9UJW7 825 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 BAG4O95429 457 aaKnown RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 IDEP14735 1019 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 TNIP1Q15025 636 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 CEP85Q6P2H3 762 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 ZBED2Q9BTP6 218 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 DSEQ9UL01 958 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 NOP56O00567 594 aaKnown RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 ZNF189O75820 626 aaPredicted RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 GYS2P54840 703 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 IFT88Q13099 833 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 PKD2Q13563 968 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 MCTP2Q6DN12 878 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 TRAF7Q6Q0C0 670 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 RPAP2Q8IXW5 612 aaPredicted RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 DCLK2Q8N568 766 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 TAB3Q8N5C8 712 aaPredicted RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 TSR2Q969E8 191 aaKnown RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 SAAL1Q96ER3 474 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 STRIP2Q9ULQ0 834 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 TBC1D2BQ9UPU7 963 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 TBCAO75347 108 aaKnown RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 DNAJC8O75937 253 aaPredicted RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 KRT15P19012 456 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 HLA-DPA1P20036 260 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 SNX16P57768 344 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 NLRP6P59044 892 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 PHLDB3Q6NSJ2 640 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 SND1Q7KZF4 910 aaKnown RBP eCLIP3.66□□□□□ -1.82
PHF3-202ENST00000393387 ZNF710Q8N1W2 664 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 GPR101Q96P66 508 aaPredicted RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 RMI1Q9H9A7 625 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 TXNDC16Q9P2K2 825 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 TLK1Q9UKI8 766 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 AFG3L2Q9Y4W6 797 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 GTPBP10A4D1E9 387 aaKnown RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 VAV2P52735 878 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 RAD51AP2Q09MP3 1159 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 CUL4BQ13620 913 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 ZKSCAN8Q15776 578 aaPredicted RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 CLUL1Q15846 466 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 IQCA1Q86XH1 822 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 SYCP3Q8IZU3 236 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 NCAPGQ9BPX3 1015 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 PRKRIP1Q9H875 184 aaPredicted RBP3.66□□□□□ -1.82
PHF3-202ENST00000393387 CTTNBP2NLQ9P2B4 639 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 CAPN11Q9UMQ6 739 aa3.66□□□□□ -1.82
PHF3-202ENST00000393387 ZNF500O60304 480 aaPredicted RBP3.65□□□□□ -1.82
PHF3-202ENST00000393387 GIGYF1O75420 1035 aaPredicted RBP3.65□□□□□ -1.82
PHF3-202ENST00000393387 CCDC93Q567U6 631 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 KCTD16Q68DU8 428 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 UTS2BQ765I0 119 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 USP48Q86UV5 1035 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 ZC3H18Q86VM9 953 aaKnown RBP3.65□□□□□ -1.82
PHF3-202ENST00000393387 HELBQ8NG08 1087 aaPredicted RBP3.65□□□□□ -1.82
PHF3-202ENST00000393387 PSPC1Q8WXF1 523 aaKnown RBP3.65□□□□□ -1.82
PHF3-202ENST00000393387 TEKT1Q969V4 418 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 TRIM39Q9HCM9 518 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 CAPN1P07384 714 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 LMOD1P29536 600 aaPredicted RBP3.65□□□□□ -1.82
PHF3-202ENST00000393387 KRT17Q04695 432 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 EHBP1Q8NDI1 1231 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 HIPK4Q8NE63 616 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 EIF2AQ9BY44 585 aaKnown RBP3.65□□□□□ -1.82
PHF3-202ENST00000393387 TRIM8Q9BZR9 551 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 BICC1Q9H694 974 aaKnown RBP3.65□□□□□ -1.82
PHF3-202ENST00000393387 VPS37BQ9H9H4 285 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 CACYBPQ9HB71 228 aaKnown RBP3.65□□□□□ -1.82
PHF3-202ENST00000393387 TMEM165Q9HC07 324 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 IFNKQ9P0W0 207 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 CTNNA3Q9UI47 895 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 CEP131Q9UPN4 1083 aa3.65□□□□□ -1.82
PHF3-202ENST00000393387 PLS1Q14651 629 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms