RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 PTPN12Q05209 780 aaKnown RBP15.08■□□□□ 0
PTPRN2-202ENST00000389416 ODF2Q5BJF6 829 aa15.08■□□□□ 0
PTPRN2-202ENST00000389416 USP48Q86UV5 1035 aa15.08■□□□□ 0
PTPRN2-202ENST00000389416 TBC1D22AQ8WUA7 517 aa15.08■□□□□ 0
PTPRN2-202ENST00000389416 CALML4Q96GE6 196 aa15.08■□□□□ 0
PTPRN2-202ENST00000389416 HAUS7Q99871 368 aa15.08■□□□□ 0
PTPRN2-202ENST00000389416 FBXO3Q9UK99 471 aa15.08■□□□□ 0
PTPRN2-202ENST00000389416 SYCP1Q15431 976 aa15.08■□□□□ 0
PTPRN2-202ENST00000389416 SYNE4Q8N205 404 aa15.08■□□□□ 0
PTPRN2-202ENST00000389416 GJD4Q96KN9 370 aaPredicted RBP15.08■□□□□ 0
PTPRN2-202ENST00000389416 CPS1P31327 1500 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 USP17L12C9JPN9 530 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 USP17L21D6R901 530 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 CTAGE5O15320 804 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 CBFA2T2O43439 604 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 LMOD1P29536 600 aaPredicted RBP15.07■□□□□ 0
PTPRN2-202ENST00000389416 EIF5P55010 431 aaKnown RBP15.07■□□□□ 0
PTPRN2-202ENST00000389416 GIMAP6Q6P9H5 292 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 KIAA0825Q8IV33 1275 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 DEF6Q9H4E7 631 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 LAMC1P11047 1609 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 HSPA1LP34931 641 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 TNNI2P48788 182 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 ZNF804BA4D1E1 1349 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 ECM2O94769 699 aaPredicted RBP15.07■□□□□ 0
PTPRN2-202ENST00000389416 NF2P35240 595 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 NIM1KQ8IY84 436 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 INTS4Q96HW7 963 aaKnown RBP15.07■□□□□ 0
PTPRN2-202ENST00000389416 TMEM87BQ96K49 555 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 DLC1Q96QB1 1528 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 MAST3O60307 1309 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 HSPA4P34932 840 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 SYKP43405 635 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 SDR42E1Q8WUS8 393 aa15.07■□□□□ 0
PTPRN2-202ENST00000389416 RRP36Q96EU6 259 aaKnown RBP15.07■□□□□ 0
PTPRN2-202ENST00000389416 ATP2B4P23634 1241 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 EPHA10Q5JZY3 1008 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 PI16Q6UXB8 463 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 FAM177A1Q8N128 213 aaPredicted RBP15.06■□□□□ 0
PTPRN2-202ENST00000389416 SUPT20HQ8NEM7 779 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 GPCPD1Q9NPB8 672 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 TRIM75PA6NK02 468 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 UBE4AQ14139 1066 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 MED14O60244 1454 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 NCAPD2Q15021 1401 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 RPS6KA4O75676 772 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 SCNN1DP51172 638 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 ZYXQ15942 572 aaKnown RBP15.06■□□□□ 0
PTPRN2-202ENST00000389416 KLHL40Q2TBA0 621 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 JCADQ9P266 1359 aa15.06■□□□□ 0
PTPRN2-202ENST00000389416 PLS1Q14651 629 aa15.05■□□□□ 0
PTPRN2-202ENST00000389416 NOM1Q5C9Z4 860 aaKnown RBP15.05■□□□□ 0
PTPRN2-202ENST00000389416 SMARCC2Q8TAQ2 1214 aa15.05■□□□□ 0
PTPRN2-202ENST00000389416 KCNG4Q8TDN1 519 aa15.05■□□□□ 0
PTPRN2-202ENST00000389416 C6orf50Q9HD87 102 aa15.05■□□□□ 0
PTPRN2-202ENST00000389416 CRB1P82279 1406 aa15.05■□□□□ 0
PTPRN2-202ENST00000389416 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.05■□□□□ 0
PTPRN2-202ENST00000389416 TTLL11Q8NHH1 800 aa15.05■□□□□ 0
PTPRN2-202ENST00000389416 CNKSR1Q969H4 720 aa15.05■□□□□ 0
PTPRN2-202ENST00000389416 SCLT1Q96NL6 688 aa15.05■□□□□ 0
PTPRN2-202ENST00000389416 CALML3P27482 149 aa15.05■□□□□ -0
PTPRN2-202ENST00000389416 GOLGA6L1Q8N7Z2 621 aa15.05■□□□□ -0
PTPRN2-202ENST00000389416 DACT1Q9NYF0 836 aa15.05■□□□□ -0
PTPRN2-202ENST00000389416 USP25Q9UHP3 1055 aa15.05■□□□□ -0
PTPRN2-202ENST00000389416 RIMS1Q86UR5 1692 aaKnown RBP15.05■□□□□ -0
PTPRN2-202ENST00000389416 PARP1P09874 1014 aaKnown RBP15.05■□□□□ -0
PTPRN2-202ENST00000389416 AFMP43652 599 aa15.05■□□□□ -0
PTPRN2-202ENST00000389416 ZNF165P49910 485 aa15.05■□□□□ -0
PTPRN2-202ENST00000389416 OTUD7BQ6GQQ9 843 aa15.05■□□□□ -0
PTPRN2-202ENST00000389416 FAM173BQ6P4H8 233 aa15.05■□□□□ -0
PTPRN2-202ENST00000389416 PREX1Q8TCU6 1659 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 E7EWF7 191 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 H7C1W4 665 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 PRKG1Q13976 671 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 DLGAP5Q15398 846 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 ANTXR1Q9H6X2 564 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 PALD1Q9ULE6 856 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 OVOS2A0A0J9YW53 1432 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 OVOS2Q6IE36 1432 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 CIAO1O76071 339 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 SASH1O94885 1247 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 TRAF1Q13077 416 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 FAM47AQ5JRC9 791 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 DSCC1Q9BVC3 393 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 USP40Q9NVE5 1235 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 STAP2Q9UGK3 403 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 V9GY48 417 aaPredicted RBP15.04■□□□□ -0
PTPRN2-202ENST00000389416 PATL2C9JE40 543 aaKnown RBP15.04■□□□□ -0
PTPRN2-202ENST00000389416 SPTLC2O15270 562 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 MMP10P09238 476 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 HSPD1P10809 573 aaKnown RBP15.04■□□□□ -0
PTPRN2-202ENST00000389416 CYP19A1P11511 503 aaPredicted RBP15.04■□□□□ -0
PTPRN2-202ENST00000389416 LIG1P18858 919 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 LRRC7Q96NW7 1537 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 FRMPD1Q5SYB0 1578 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 SNAP23O00161 211 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 TFAP4Q01664 338 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 SMIM5Q71RC9 77 aa15.04■□□□□ -0
PTPRN2-202ENST00000389416 CEP170BQ9Y4F5 1589 aaPredicted RBP15.04■□□□□ -0
PTPRN2-202ENST00000389416 TEKT1Q969V4 418 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms