RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ARAP2Q8WZ64 1704 aa17.13■□□□□ 0.33
PRPF18-202ENST00000378572 FAM84BQ96KN1 310 aaPredicted RBP17.13■□□□□ 0.33
PRPF18-202ENST00000378572 TDRD3Q9H7E2 651 aaKnown RBP17.13■□□□□ 0.33
PRPF18-202ENST00000378572 HPS5Q9UPZ3 1129 aa17.13■□□□□ 0.33
PRPF18-202ENST00000378572 FKTNO75072 461 aa17.12■□□□□ 0.33
PRPF18-202ENST00000378572 ALDH1A1P00352 501 aa17.12■□□□□ 0.33
PRPF18-202ENST00000378572 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
PRPF18-202ENST00000378572 PKN2Q16513 984 aaKnown RBP17.12■□□□□ 0.33
PRPF18-202ENST00000378572 LRRC24Q50LG9 513 aa17.12■□□□□ 0.33
PRPF18-202ENST00000378572 ATF7IPQ6VMQ6 1270 aa17.12■□□□□ 0.33
PRPF18-202ENST00000378572 FRAT1Q92837 279 aaPredicted RBP17.12■□□□□ 0.33
PRPF18-202ENST00000378572 ZNF70Q9UC06 446 aaPredicted RBP17.12■□□□□ 0.33
PRPF18-202ENST00000378572 SERPINA10Q9UK55 444 aa17.12■□□□□ 0.33
PRPF18-202ENST00000378572 UTYO14607 1347 aa17.11■□□□□ 0.33
PRPF18-202ENST00000378572 TCP10L2B9ZVM9 353 aa17.11■□□□□ 0.33
PRPF18-202ENST00000378572 CRKP46108 304 aa17.11■□□□□ 0.33
PRPF18-202ENST00000378572 SPDYE2Q495Y8 402 aa17.11■□□□□ 0.33
PRPF18-202ENST00000378572 KLHDC4Q8TBB5 520 aa17.11■□□□□ 0.33
PRPF18-202ENST00000378572 NOB1Q9ULX3 412 aaKnown RBP17.11■□□□□ 0.33
PRPF18-202ENST00000378572 RIPOR2Q9Y4F9 1068 aa17.11■□□□□ 0.33
PRPF18-202ENST00000378572 ZBTB48P10074 688 aaPredicted RBP17.1■□□□□ 0.33
PRPF18-202ENST00000378572 TNNI2P48788 182 aa17.1■□□□□ 0.33
PRPF18-202ENST00000378572 DZIP1LQ8IYY4 767 aaKnown RBP17.1■□□□□ 0.33
PRPF18-202ENST00000378572 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
PRPF18-202ENST00000378572 MAP3K11Q16584 847 aa17.1■□□□□ 0.33
PRPF18-202ENST00000378572 RABL6Q3YEC7 729 aaPredicted RBP17.1■□□□□ 0.33
PRPF18-202ENST00000378572 IFNL1Q8IU54 200 aa17.1■□□□□ 0.33
PRPF18-202ENST00000378572 ANKRD13AQ8IZ07 590 aa17.1■□□□□ 0.33
PRPF18-202ENST00000378572 ELP3Q9H9T3 547 aa17.1■□□□□ 0.33
PRPF18-202ENST00000378572 TRIM27P14373 513 aa17.09■□□□□ 0.33
PRPF18-202ENST00000378572 INHBEP58166 350 aa17.09■□□□□ 0.33
PRPF18-202ENST00000378572 C20orf194Q5TEA3 1177 aa17.09■□□□□ 0.33
PRPF18-202ENST00000378572 OTUD7BQ6GQQ9 843 aa17.09■□□□□ 0.33
PRPF18-202ENST00000378572 TBC1D22AQ8WUA7 517 aa17.09■□□□□ 0.33
PRPF18-202ENST00000378572 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
PRPF18-202ENST00000378572 R3HDMLQ9H3Y0 253 aa17.09■□□□□ 0.33
PRPF18-202ENST00000378572 TMOD2Q9NZR1 351 aa17.09■□□□□ 0.33
PRPF18-202ENST00000378572 IFIT1P09914 478 aaKnown RBP17.08■□□□□ 0.32
PRPF18-202ENST00000378572 USP2O75604 605 aaPredicted RBP17.07■□□□□ 0.32
PRPF18-202ENST00000378572 PDE8BO95263 885 aa17.07■□□□□ 0.32
PRPF18-202ENST00000378572 PUM3Q15397 648 aaKnown RBP17.07■□□□□ 0.32
PRPF18-202ENST00000378572 NOM1Q5C9Z4 860 aaKnown RBP17.07■□□□□ 0.32
PRPF18-202ENST00000378572 FBXO46Q6PJ61 603 aaPredicted RBP17.07■□□□□ 0.32
PRPF18-202ENST00000378572 TEKT1Q969V4 418 aa17.07■□□□□ 0.32
PRPF18-202ENST00000378572 TMEM39BQ9GZU3 492 aa17.07■□□□□ 0.32
PRPF18-202ENST00000378572 OTOFQ9HC10 1997 aa17.07■□□□□ 0.32
PRPF18-202ENST00000378572 IGF2BP3O00425 579 aaKnown RBP eCLIP17.07■□□□□ 0.32
PRPF18-202ENST00000378572 BCAMP50895 628 aa17.07■□□□□ 0.32
PRPF18-202ENST00000378572 FBXO33Q7Z6M2 555 aa17.07■□□□□ 0.32
PRPF18-202ENST00000378572 OPTNQ96CV9 577 aa17.07■□□□□ 0.32
PRPF18-202ENST00000378572 TRIM17Q9Y577 477 aa17.07■□□□□ 0.32
PRPF18-202ENST00000378572 UNCXA6NJT0 531 aa17.06■□□□□ 0.32
PRPF18-202ENST00000378572 SLC5A1P13866 664 aa17.06■□□□□ 0.32
PRPF18-202ENST00000378572 CACNB3P54284 484 aa17.06■□□□□ 0.32
PRPF18-202ENST00000378572 GRIK5Q16478 980 aa17.06■□□□□ 0.32
PRPF18-202ENST00000378572 CDAN1Q8IWY9 1227 aa17.06■□□□□ 0.32
PRPF18-202ENST00000378572 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
PRPF18-202ENST00000378572 CRBNQ96SW2 442 aa17.06■□□□□ 0.32
PRPF18-202ENST00000378572 CFHR5Q9BXR6 569 aa17.06■□□□□ 0.32
PRPF18-202ENST00000378572 CSADQ9Y600 493 aa17.06■□□□□ 0.32
PRPF18-202ENST00000378572 MAST3O60307 1309 aa17.06■□□□□ 0.32
PRPF18-202ENST00000378572 USP44Q9H0E7 712 aa17.05■□□□□ 0.32
PRPF18-202ENST00000378572 UBTFL1P0CB47 393 aaPredicted RBP17.04■□□□□ 0.32
PRPF18-202ENST00000378572 RLBP1P12271 317 aa17.04■□□□□ 0.32
PRPF18-202ENST00000378572 GJA5P36382 358 aa17.04■□□□□ 0.32
PRPF18-202ENST00000378572 AAMPQ13685 434 aa17.04■□□□□ 0.32
PRPF18-202ENST00000378572 VGLL2Q8N8G2 317 aa17.04■□□□□ 0.32
PRPF18-202ENST00000378572 EXOC6Q8TAG9 804 aa17.04■□□□□ 0.32
PRPF18-202ENST00000378572 PANK1Q8TE04 598 aa17.04■□□□□ 0.32
PRPF18-202ENST00000378572 SIL1Q9H173 461 aa17.04■□□□□ 0.32
PRPF18-202ENST00000378572 TNNQ9UQP3 1299 aa17.04■□□□□ 0.32
PRPF18-202ENST00000378572 EYA2O00167 538 aa17.04■□□□□ 0.32
PRPF18-202ENST00000378572 CRHR2Q13324 411 aa17.04■□□□□ 0.32
PRPF18-202ENST00000378572 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
PRPF18-202ENST00000378572 VGLL4Q14135 290 aa17.03■□□□□ 0.32
PRPF18-202ENST00000378572 CLUAP1Q96AJ1 413 aa17.03■□□□□ 0.32
PRPF18-202ENST00000378572 OTUD5Q96G74 571 aa17.03■□□□□ 0.32
PRPF18-202ENST00000378572 ERO1AQ96HE7 468 aa17.03■□□□□ 0.32
PRPF18-202ENST00000378572 PPP4R2Q9NY27 417 aa17.03■□□□□ 0.32
PRPF18-202ENST00000378572 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.32
PRPF18-202ENST00000378572 MVPQ14764 893 aaKnown RBP17.02■□□□□ 0.32
PRPF18-202ENST00000378572 CD99L2Q8TCZ2 262 aa17.02■□□□□ 0.32
PRPF18-202ENST00000378572 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
PRPF18-202ENST00000378572 TEPSINQ96N21 525 aa17.02■□□□□ 0.32
PRPF18-202ENST00000378572 CCL15-CCL14A0A0B4J2E2 113 aa17.01■□□□□ 0.31
PRPF18-202ENST00000378572 MAP3K9P80192 1104 aa17.01■□□□□ 0.31
PRPF18-202ENST00000378572 CCL15Q16663 113 aa17.01■□□□□ 0.31
PRPF18-202ENST00000378572 LPIN2Q92539 896 aa17.01■□□□□ 0.31
PRPF18-202ENST00000378572 COG6Q9Y2V7 657 aa17.01■□□□□ 0.31
PRPF18-202ENST00000378572 TNRC18O15417 2968 aaPredicted RBP17.01■□□□□ 0.31
PRPF18-202ENST00000378572 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.01■□□□□ 0.31
PRPF18-202ENST00000378572 OTOP1Q7RTM1 612 aa17.01■□□□□ 0.31
PRPF18-202ENST00000378572 HOOK2Q96ED9 719 aa17.01■□□□□ 0.31
PRPF18-202ENST00000378572 ZDHHC15Q96MV8 337 aa17.01■□□□□ 0.31
PRPF18-202ENST00000378572 WRNIP1Q96S55 665 aa17.01■□□□□ 0.31
PRPF18-202ENST00000378572 DDX19BQ9UMR2 479 aa17.01■□□□□ 0.31
PRPF18-202ENST00000378572 LAMB1P07942 1786 aa17.01■□□□□ 0.31
PRPF18-202ENST00000378572 PDE4DIPQ5VU43 2346 aa17■□□□□ 0.31
PRPF18-202ENST00000378572 WDHD1O75717 1129 aaPredicted RBP17■□□□□ 0.31
PRPF18-202ENST00000378572 FGFR2P21802 821 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms