RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 ARFGEF2Q9Y6D5 1785 aa17.91■□□□□ 0.46
FXN-201ENST00000377270 IVLP07476 585 aa17.9■□□□□ 0.46
FXN-201ENST00000377270 ATP5JP18859 108 aa17.9■□□□□ 0.46
FXN-201ENST00000377270 OAS2P29728 719 aaKnown RBP17.9■□□□□ 0.46
FXN-201ENST00000377270 RNF20Q5VTR2 975 aa17.9■□□□□ 0.46
FXN-201ENST00000377270 COL15A1P39059 1388 aa17.9■□□□□ 0.46
FXN-201ENST00000377270 COL5A2P05997 1499 aaPredicted RBP17.9■□□□□ 0.46
FXN-201ENST00000377270 ANKRD65E5RJM6 399 aa17.9■□□□□ 0.46
FXN-201ENST00000377270 H7C1W4 665 aa17.9■□□□□ 0.46
FXN-201ENST00000377270 COQ9O75208 318 aa17.9■□□□□ 0.46
FXN-201ENST00000377270 DNAJC5Q9H3Z4 198 aa17.9■□□□□ 0.46
FXN-201ENST00000377270 SNRKQ9NRH2 765 aa17.9■□□□□ 0.46
FXN-201ENST00000377270 ETAA1Q9NY74 926 aa17.9■□□□□ 0.46
FXN-201ENST00000377270 ZNF335Q9H4Z2 1342 aaPredicted RBP17.9■□□□□ 0.46
FXN-201ENST00000377270 SLC27A2O14975 620 aa17.89■□□□□ 0.46
FXN-201ENST00000377270 STX6O43752 255 aa17.89■□□□□ 0.46
FXN-201ENST00000377270 F13A1P00488 732 aa17.89■□□□□ 0.46
FXN-201ENST00000377270 NKX1-1Q15270 411 aaPredicted RBP17.89■□□□□ 0.46
FXN-201ENST00000377270 CCDC83Q8IWF9 413 aa17.89■□□□□ 0.46
FXN-201ENST00000377270 TATDN2Q93075 761 aa17.89■□□□□ 0.46
FXN-201ENST00000377270 ZBTB3Q9H5J0 574 aa17.89■□□□□ 0.46
FXN-201ENST00000377270 CWC25Q9NXE8 425 aaPredicted RBP17.89■□□□□ 0.46
FXN-201ENST00000377270 NRBP1Q9UHY1 535 aa17.89■□□□□ 0.46
FXN-201ENST00000377270 NDUFB9Q9Y6M9 179 aa17.89■□□□□ 0.46
FXN-201ENST00000377270 GLI3P10071 1580 aa17.89■□□□□ 0.45
FXN-201ENST00000377270 FOXO4P98177 505 aa17.89■□□□□ 0.45
FXN-201ENST00000377270 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.89■□□□□ 0.45
FXN-201ENST00000377270 DBNDD2Q9BQY9 259 aa17.89■□□□□ 0.45
FXN-201ENST00000377270 PARP4Q9UKK3 1724 aaKnown RBP17.89■□□□□ 0.45
FXN-201ENST00000377270 PAX7P23759 505 aa17.88■□□□□ 0.45
FXN-201ENST00000377270 ZNF589Q86UQ0 364 aaPredicted RBP17.88■□□□□ 0.45
FXN-201ENST00000377270 SYT1P21579 422 aa17.88■□□□□ 0.45
FXN-201ENST00000377270 CC2D2BQ6DHV5 1058 aa17.88■□□□□ 0.45
FXN-201ENST00000377270 FOXR1Q6PIV2 292 aa17.88■□□□□ 0.45
FXN-201ENST00000377270 ZSCAN31Q96LW9 406 aaPredicted RBP17.88■□□□□ 0.45
FXN-201ENST00000377270 C21orf2O43822 256 aa17.87■□□□□ 0.45
FXN-201ENST00000377270 DTNBO60941 627 aa17.87■□□□□ 0.45
FXN-201ENST00000377270 SLU7O95391 586 aaKnown RBP17.87■□□□□ 0.45
FXN-201ENST00000377270 LEKR1Q6ZMV7 388 aa17.87■□□□□ 0.45
FXN-201ENST00000377270 LUZP1Q86V48 1076 aa17.87■□□□□ 0.45
FXN-201ENST00000377270 LAMB4A4D0S4 1761 aa17.87■□□□□ 0.45
FXN-201ENST00000377270 PSMA5P28066 241 aa17.87■□□□□ 0.45
FXN-201ENST00000377270 ARMCX6Q7L4S7 300 aa17.87■□□□□ 0.45
FXN-201ENST00000377270 GIMAP7Q8NHV1 300 aa17.87■□□□□ 0.45
FXN-201ENST00000377270 SRRTQ9BXP5 876 aaKnown RBP17.87■□□□□ 0.45
FXN-201ENST00000377270 MED23Q9ULK4 1368 aa17.87■□□□□ 0.45
FXN-201ENST00000377270 ZRANB2O95218 330 aaKnown RBP eCLIP17.86■□□□□ 0.45
FXN-201ENST00000377270 ZNF75DP51815 510 aa17.86■□□□□ 0.45
FXN-201ENST00000377270 ERCC6LQ2NKX8 1250 aa17.86■□□□□ 0.45
FXN-201ENST00000377270 PLA2G4DQ86XP0 818 aa17.86■□□□□ 0.45
FXN-201ENST00000377270 UBXN6Q9BZV1 441 aa17.86■□□□□ 0.45
FXN-201ENST00000377270 SH2B1Q9NRF2 756 aaPredicted RBP17.86■□□□□ 0.45
FXN-201ENST00000377270 EXOC4Q96A65 974 aa17.86■□□□□ 0.45
FXN-201ENST00000377270 TRIM5Q9C035 493 aa17.86■□□□□ 0.45
FXN-201ENST00000377270 PSD3Q9NYI0 1048 aa17.86■□□□□ 0.45
FXN-201ENST00000377270 GJB2P29033 226 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 COL9A3Q14050 684 aaPredicted RBP17.85■□□□□ 0.45
FXN-201ENST00000377270 ME3Q16798 604 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 AP1ARQ63HQ0 302 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 CACTINQ8WUQ7 758 aaKnown RBP17.85■□□□□ 0.45
FXN-201ENST00000377270 NEUROD6Q96NK8 337 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 TAF5LO75529 589 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 TYRO3Q06418 890 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 ZRSR1Q15695 479 aaKnown RBP17.85■□□□□ 0.45
FXN-201ENST00000377270 MAP3K11Q16584 847 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 THOC1Q96FV9 657 aaKnown RBP17.85■□□□□ 0.45
FXN-201ENST00000377270 TAF6LQ9Y6J9 622 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 ADCY2Q08462 1091 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 BLOC1S2Q6QNY1 142 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 NECAB1Q8N987 351 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 TPCN1Q9ULQ1 816 aa17.85■□□□□ 0.45
FXN-201ENST00000377270 KCPQ6ZWJ8 1503 aa17.84■□□□□ 0.45
FXN-201ENST00000377270 CHGBP05060 677 aa17.84■□□□□ 0.45
FXN-201ENST00000377270 TBC1D8BQ0IIM8 1120 aa17.84■□□□□ 0.45
FXN-201ENST00000377270 TMCO3Q6UWJ1 677 aa17.84■□□□□ 0.45
FXN-201ENST00000377270 DDX46Q7L014 1031 aaKnown RBP17.84■□□□□ 0.45
FXN-201ENST00000377270 ATG9AQ7Z3C6 839 aa17.84■□□□□ 0.45
FXN-201ENST00000377270 TCEANC2Q96MN5 208 aa17.84■□□□□ 0.45
FXN-201ENST00000377270 HAUS7Q99871 368 aa17.84■□□□□ 0.45
FXN-201ENST00000377270 ZNF330Q9Y3S2 320 aaPredicted RBP17.84■□□□□ 0.45
FXN-201ENST00000377270 KIF2AO00139 706 aaPredicted RBP17.84■□□□□ 0.45
FXN-201ENST00000377270 DNM1Q05193 864 aaKnown RBP17.84■□□□□ 0.45
FXN-201ENST00000377270 PTPN14Q15678 1187 aa17.84■□□□□ 0.45
FXN-201ENST00000377270 EFCAB13Q8IY85 973 aa17.84■□□□□ 0.45
FXN-201ENST00000377270 CBX8Q9HC52 389 aa17.84■□□□□ 0.45
FXN-201ENST00000377270 ADAM21Q9UKJ8 722 aa17.84■□□□□ 0.45
FXN-201ENST00000377270 TIMM10P62072 90 aa17.83■□□□□ 0.44
FXN-201ENST00000377270 NYAP1Q6ZVC0 841 aa17.83■□□□□ 0.44
FXN-201ENST00000377270 TADA2BQ86TJ2 420 aa17.83■□□□□ 0.44
FXN-201ENST00000377270 MICALL1Q8N3F8 863 aa17.83■□□□□ 0.44
FXN-201ENST00000377270 ERCC4Q92889 916 aaPredicted RBP17.83■□□□□ 0.44
FXN-201ENST00000377270 TMOD3Q9NYL9 352 aa17.83■□□□□ 0.44
FXN-201ENST00000377270 ST3GAL1Q11201 340 aa17.83■□□□□ 0.44
FXN-201ENST00000377270 ZNF594Q96JF6 807 aaPredicted RBP17.83■□□□□ 0.44
FXN-201ENST00000377270 GNL3LQ9NVN8 582 aaKnown RBP17.83■□□□□ 0.44
FXN-201ENST00000377270 CLIP2Q9UDT6 1046 aa17.83■□□□□ 0.44
FXN-201ENST00000377270 ERCC3P19447 782 aa17.82■□□□□ 0.44
FXN-201ENST00000377270 CCDC129Q6ZRS4 1044 aa17.82■□□□□ 0.44
FXN-201ENST00000377270 SEC62Q99442 399 aaKnown RBP17.82■□□□□ 0.44
FXN-201ENST00000377270 NUP62CLQ9H1M0 184 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms