RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ONECUT3O60422 494 aaPredicted RBP23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 ANTXR2P58335 489 aa23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 TRDNQ13061 729 aa23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 RESTQ13127 1097 aa23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 NAA16Q6N069 864 aaPredicted RBP23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 TTC6Q86TZ1 520 aa23.96■■□□□ 1.43
CHRNA3-202ENST00000348639 UBE4AQ14139 1066 aa23.95■■□□□ 1.42
CHRNA3-202ENST00000348639 KLHL34Q8N239 644 aa23.95■■□□□ 1.42
CHRNA3-202ENST00000348639 FBXO41Q8TF61 875 aa23.95■■□□□ 1.42
CHRNA3-202ENST00000348639 TSPY26PQ9H489 355 aa23.95■■□□□ 1.42
CHRNA3-202ENST00000348639 GPHNQ9NQX3 736 aaPredicted RBP23.95■■□□□ 1.42
CHRNA3-202ENST00000348639 TAF1P21675 1872 aa23.95■■□□□ 1.42
CHRNA3-202ENST00000348639 ZNF804BA4D1E1 1349 aa23.95■■□□□ 1.42
CHRNA3-202ENST00000348639 EP400Q96L91 3159 aa23.95■■□□□ 1.42
CHRNA3-202ENST00000348639 PATL2C9JE40 543 aaKnown RBP23.94■■□□□ 1.42
CHRNA3-202ENST00000348639 RFC4P35249 363 aa23.94■■□□□ 1.42
CHRNA3-202ENST00000348639 TBC1D10CQ8IV04 446 aa23.94■■□□□ 1.42
CHRNA3-202ENST00000348639 CELF1Q92879 486 aaKnown RBP23.94■■□□□ 1.42
CHRNA3-202ENST00000348639 NLRP3Q96P20 1036 aa23.94■■□□□ 1.42
CHRNA3-202ENST00000348639 NPHP1O15259 732 aa23.93■■□□□ 1.42
CHRNA3-202ENST00000348639 TPTE2Q6XPS3 522 aa23.93■■□□□ 1.42
CHRNA3-202ENST00000348639 QTRT2Q9H974 415 aaKnown RBP23.93■■□□□ 1.42
CHRNA3-202ENST00000348639 MINPP1Q9UNW1 487 aa23.93■■□□□ 1.42
CHRNA3-202ENST00000348639 IQSEC3Q9UPP2 1182 aaPredicted RBP23.93■■□□□ 1.42
CHRNA3-202ENST00000348639 SBF2Q86WG5 1849 aa23.93■■□□□ 1.42
CHRNA3-202ENST00000348639 WTIPA6NIX2 430 aaPredicted RBP23.93■■□□□ 1.42
CHRNA3-202ENST00000348639 MBD4O95243 580 aa23.93■■□□□ 1.42
CHRNA3-202ENST00000348639 TRAPPC3LQ5T215 181 aa23.92■■□□□ 1.42
CHRNA3-202ENST00000348639 FAM196AQ6ZSG2 479 aa23.92■■□□□ 1.42
CHRNA3-202ENST00000348639 GNL3LQ9NVN8 582 aaKnown RBP23.92■■□□□ 1.42
CHRNA3-202ENST00000348639 LY75O60449 1722 aa23.92■■□□□ 1.42
CHRNA3-202ENST00000348639 COL24A1Q17RW2 1714 aa23.92■■□□□ 1.42
CHRNA3-202ENST00000348639 KLF18A0A0U1RQI7 1052 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 DHX16O60231 1041 aaKnown RBP23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 TPRNQ4KMQ1 711 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 IFNL3Q8IZI9 196 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 SPATA32Q96LK8 384 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 TAF1LQ8IZX4 1826 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 CASZ1Q86V15 1759 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 PNPLA7Q6ZV29 1317 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 GNAT2P19087 354 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 GYG1P46976 350 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 LEO1Q8WVC0 666 aaPredicted RBP23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 BCL11BQ9C0K0 894 aaPredicted RBP23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 ARMT1Q9H993 441 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 EPB41L4AQ9HCS5 686 aaPredicted RBP23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 LRP2BPQ9P2M1 347 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 TFIP11Q9UBB9 837 aaKnown RBP23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 HPS5Q9UPZ3 1129 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 A0A1B0GUL6 1792 aa23.91■■□□□ 1.42
CHRNA3-202ENST00000348639 LRRC4BQ9NT99 713 aa23.9■■□□□ 1.42
CHRNA3-202ENST00000348639 GOLGA8BA8MQT2 603 aa23.89■■□□□ 1.42
CHRNA3-202ENST00000348639 TRIM44Q96DX7 344 aaPredicted RBP23.89■■□□□ 1.42
CHRNA3-202ENST00000348639 NAPBQ9H115 298 aa23.89■■□□□ 1.42
CHRNA3-202ENST00000348639 ANGEL1Q9UNK9 670 aaKnown RBP23.89■■□□□ 1.42
CHRNA3-202ENST00000348639 C4BP0C0L5 1744 aa23.89■■□□□ 1.42
CHRNA3-202ENST00000348639 CARMIL3Q8ND23 1372 aa23.89■■□□□ 1.42
CHRNA3-202ENST00000348639 GSG1L2A8MUP6 293 aa23.89■■□□□ 1.41
CHRNA3-202ENST00000348639 CAVIN4Q5BKX8 364 aa23.89■■□□□ 1.41
CHRNA3-202ENST00000348639 CYB5R4Q7L1T6 521 aa23.89■■□□□ 1.41
CHRNA3-202ENST00000348639 FDPSP14324 419 aaKnown RBP23.88■■□□□ 1.41
CHRNA3-202ENST00000348639 RPS8P62241 208 aaKnown RBP23.88■■□□□ 1.41
CHRNA3-202ENST00000348639 VPS37DQ86XT2 251 aa23.88■■□□□ 1.41
CHRNA3-202ENST00000348639 CFAP45Q9UL16 551 aa23.88■■□□□ 1.41
CHRNA3-202ENST00000348639 DENND2AQ9ULE3 1009 aa23.88■■□□□ 1.41
CHRNA3-202ENST00000348639 LCORLQ8N3X6 602 aa23.87■■□□□ 1.41
CHRNA3-202ENST00000348639 TMEM87BQ96K49 555 aa23.87■■□□□ 1.41
CHRNA3-202ENST00000348639 NACAP1Q9BZK3 213 aa23.87■■□□□ 1.41
CHRNA3-202ENST00000348639 B4E1Z4 1266 aa23.86■■□□□ 1.41
CHRNA3-202ENST00000348639 SH2B2O14492 632 aaPredicted RBP23.86■■□□□ 1.41
CHRNA3-202ENST00000348639 ABCF2Q9UG63 623 aa23.86■■□□□ 1.41
CHRNA3-202ENST00000348639 NEDD4P46934 1319 aa23.86■■□□□ 1.41
CHRNA3-202ENST00000348639 GOLGA6L4A6NEF3 574 aa23.86■■□□□ 1.41
CHRNA3-202ENST00000348639 RNF214Q8ND24 703 aa23.86■■□□□ 1.41
CHRNA3-202ENST00000348639 NKX2-3Q8TAU0 364 aa23.86■■□□□ 1.41
CHRNA3-202ENST00000348639 PDLIM2Q96JY6 352 aa23.86■■□□□ 1.41
CHRNA3-202ENST00000348639 FAM84BQ96KN1 310 aaPredicted RBP23.86■■□□□ 1.41
CHRNA3-202ENST00000348639 SLC4A4Q9Y6R1 1079 aa23.86■■□□□ 1.41
CHRNA3-202ENST00000348639 CYP7A1P22680 504 aa23.85■■□□□ 1.41
CHRNA3-202ENST00000348639 ADD1P35611 737 aaKnown RBP23.85■■□□□ 1.41
CHRNA3-202ENST00000348639 ATL3Q6DD88 541 aa23.85■■□□□ 1.41
CHRNA3-202ENST00000348639 CNNM2Q9H8M5 875 aa23.85■■□□□ 1.41
CHRNA3-202ENST00000348639 C4AP0C0L4 1744 aa23.85■■□□□ 1.41
CHRNA3-202ENST00000348639 PRKAB2O43741 272 aa23.84■■□□□ 1.41
CHRNA3-202ENST00000348639 FOSBP53539 338 aa23.84■■□□□ 1.41
CHRNA3-202ENST00000348639 RRAGDQ9NQL2 400 aaPredicted RBP23.84■■□□□ 1.41
CHRNA3-202ENST00000348639 COL1A1P02452 1464 aaPredicted RBP23.84■■□□□ 1.41
CHRNA3-202ENST00000348639 CPLX1O14810 134 aa23.84■■□□□ 1.41
CHRNA3-202ENST00000348639 PPFIA3O75145 1194 aa23.84■■□□□ 1.41
CHRNA3-202ENST00000348639 AKNAD1Q5T1N1 836 aa23.84■■□□□ 1.41
CHRNA3-202ENST00000348639 FBXO33Q7Z6M2 555 aa23.84■■□□□ 1.41
CHRNA3-202ENST00000348639 IGDCC4Q8TDY8 1250 aa23.84■■□□□ 1.41
CHRNA3-202ENST00000348639 ANKRD2Q9GZV1 360 aa23.84■■□□□ 1.41
CHRNA3-202ENST00000348639 TIAM2Q8IVF5 1701 aa23.83■■□□□ 1.41
CHRNA3-202ENST00000348639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.83■■□□□ 1.41
CHRNA3-202ENST00000348639 SEMA3EO15041 775 aa23.83■■□□□ 1.41
CHRNA3-202ENST00000348639 TDO2P48775 406 aa23.83■■□□□ 1.41
CHRNA3-202ENST00000348639 NFIXQ14938 502 aa23.83■■□□□ 1.41
CHRNA3-202ENST00000348639 MIGA1Q8NAN2 632 aa23.83■■□□□ 1.41
CHRNA3-202ENST00000348639 LIG1P18858 919 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms