RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 CCAR2Q8N163 923 aaKnown RBP20.18■□□□□ 0.82
PTP4A3-201ENST00000329397 ZCRB1Q8TBF4 217 aaKnown RBP20.18■□□□□ 0.82
PTP4A3-201ENST00000329397 TMEM94Q12767 1356 aa20.18■□□□□ 0.82
PTP4A3-201ENST00000329397 LAMB4A4D0S4 1761 aa20.18■□□□□ 0.82
PTP4A3-201ENST00000329397 NUP188Q5SRE5 1749 aa20.18■□□□□ 0.82
PTP4A3-201ENST00000329397 ABCC6O95255 1503 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 ZNF213O14771 459 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 APPP05067 770 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 SLC3A2P08195 630 aaKnown RBP20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 PFKFB1P16118 471 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 ARMCX5Q6P1M9 558 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 SYNE3Q6ZMZ3 975 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 NBPF3Q9H094 633 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 NAT10Q9H0A0 1025 aaKnown RBP20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 MST1RQ04912 1400 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 HSP90AA4PQ58FG1 418 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 MICU3Q86XE3 530 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 CTNNA3Q9UI47 895 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 MCAMP43121 646 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 KIF23Q02241 960 aaPredicted RBP20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 GOLGA8FQ08AF8 430 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 GOLGA8DPQ0D2H9 430 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 TBC1D10CQ8IV04 446 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 STK11IPQ8N1F8 1099 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 NCOA7Q8NI08 942 aa20.17■□□□□ 0.82
PTP4A3-201ENST00000329397 MYO5AQ9Y4I1 1855 aaKnown RBP20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 CIAO1O76071 339 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 ELF2Q15723 593 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 ANO1Q5XXA6 986 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 ATL3Q6DD88 541 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 CYB5R4Q7L1T6 521 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 TEX2Q8IWB9 1127 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 LRRN4CLQ8ND94 238 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 APPBP2Q92624 585 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 PRDM11Q9NQV5 511 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 STRN4Q9NRL3 753 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 AXDND1Q5T1B0 1012 aaPredicted RBP20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 KCNG4Q8TDN1 519 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 CLIC6Q96NY7 704 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
PTP4A3-201ENST00000329397 IDH1O75874 414 aaKnown RBP20.15■□□□□ 0.82
PTP4A3-201ENST00000329397 EVCP57679 992 aa20.15■□□□□ 0.82
PTP4A3-201ENST00000329397 ADAMTSL3P82987 1691 aa20.15■□□□□ 0.82
PTP4A3-201ENST00000329397 E4F1Q66K89 784 aaPredicted RBP20.15■□□□□ 0.82
PTP4A3-201ENST00000329397 POLR3EQ9NVU0 708 aa20.15■□□□□ 0.82
PTP4A3-201ENST00000329397 A0A1W2PQ27 194 aa20.15■□□□□ 0.82
PTP4A3-201ENST00000329397 A0A1W2PQ64 194 aa20.15■□□□□ 0.82
PTP4A3-201ENST00000329397 A0A1W2PQD8 194 aa20.15■□□□□ 0.82
PTP4A3-201ENST00000329397 B4E1Z4 1266 aa20.14■□□□□ 0.82
PTP4A3-201ENST00000329397 METTL24Q5JXM2 366 aa20.14■□□□□ 0.82
PTP4A3-201ENST00000329397 CDC27P30260 824 aa20.14■□□□□ 0.81
PTP4A3-201ENST00000329397 IFIT5Q13325 482 aaKnown RBP20.14■□□□□ 0.81
PTP4A3-201ENST00000329397 NCAPHQ15003 741 aa20.14■□□□□ 0.81
PTP4A3-201ENST00000329397 SPECC1Q5M775 1068 aa20.14■□□□□ 0.81
PTP4A3-201ENST00000329397 SLC9C2Q5TAH2 1124 aa20.14■□□□□ 0.81
PTP4A3-201ENST00000329397 PCDH11XQ9BZA7 1347 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 PCDH11YQ9BZA8 1340 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 NEMFO60524 1076 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 PNOCQ13519 176 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 DPF2Q92785 391 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 ALG1Q9BT22 464 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 SNAP23O00161 211 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 YEATS4O95619 227 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 TCIRG1Q13488 830 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 KMT5BQ4FZB7 885 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 VPS37DQ86XT2 251 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 ISCA1Q9BUE6 129 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 GREM2Q9H772 168 aa20.13■□□□□ 0.81
PTP4A3-201ENST00000329397 DHX16O60231 1041 aaKnown RBP20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 SYT10Q6XYQ8 523 aa20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.12■□□□□ 0.812e-8■□□□□ 10.8
PTP4A3-201ENST00000329397 DNAJC10Q8IXB1 793 aa20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 TNS3Q68CZ2 1445 aa20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 KCPQ6ZWJ8 1503 aa20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 HLFQ16534 295 aa20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 LDHAL6AQ6ZMR3 332 aa20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 HELBQ8NG08 1087 aaPredicted RBP20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 ASAP1Q9ULH1 1129 aa20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 METAP2P50579 478 aaKnown RBP eCLIP20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 GNL2Q13823 731 aaKnown RBP20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 PPP1R13BQ96KQ4 1090 aa20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 PIH1D3Q9NQM4 214 aaKnown RBP20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 AKAP2Q9Y2D5 859 aa20.12■□□□□ 0.81
PTP4A3-201ENST00000329397 SFPQP23246 707 aaKnown RBP eCLIP20.11■□□□□ 0.81
PTP4A3-201ENST00000329397 SYKP43405 635 aa20.11■□□□□ 0.81
PTP4A3-201ENST00000329397 NLRP12P59046 1061 aa20.11■□□□□ 0.81
PTP4A3-201ENST00000329397 KRT40Q6A162 431 aa20.11■□□□□ 0.81
PTP4A3-201ENST00000329397 FBXO38Q6PIJ6 1188 aa20.11■□□□□ 0.81
PTP4A3-201ENST00000329397 SHC4Q6S5L8 630 aa20.11■□□□□ 0.81
PTP4A3-201ENST00000329397 BRAPQ7Z569 592 aa20.11■□□□□ 0.81
PTP4A3-201ENST00000329397 CCDC82Q8N4S0 544 aa20.11■□□□□ 0.81
PTP4A3-201ENST00000329397 KIF18AQ8NI77 898 aa20.11■□□□□ 0.81
PTP4A3-201ENST00000329397 OSBPL5Q9H0X9 879 aaPredicted RBP20.11■□□□□ 0.81
PTP4A3-201ENST00000329397 HSD3B7Q9H2F3 369 aa20.11■□□□□ 0.81
PTP4A3-201ENST00000329397 SPATA31A3Q5VYP0 1347 aa20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 FOXN1O15353 648 aa20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 ZFYP08048 801 aaPredicted RBP20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 CHRM1P11229 460 aaPredicted RBP20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 ITGA6P23229 1130 aa20.1■□□□□ 0.81
PTP4A3-201ENST00000329397 FANCCQ00597 558 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms