RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 LEMD3Q9Y2U8 911 aa31.29■■■□□ 2.6
TM6SF1-202ENST00000322019 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.29■■■□□ 2.6
TM6SF1-202ENST00000322019 UFL1O94874 794 aa31.29■■■□□ 2.6
TM6SF1-202ENST00000322019 BAG4O95429 457 aaKnown RBP31.29■■■□□ 2.6
TM6SF1-202ENST00000322019 HMGB1P09429 215 aaKnown RBP31.29■■■□□ 2.6
TM6SF1-202ENST00000322019 TBC1D10CQ8IV04 446 aa31.29■■■□□ 2.6
TM6SF1-202ENST00000322019 BRIP1Q9BX63 1249 aa31.28■■■□□ 2.6
TM6SF1-202ENST00000322019 GPHNQ9NQX3 736 aaPredicted RBP31.28■■■□□ 2.6
TM6SF1-202ENST00000322019 PARP3Q9Y6F1 533 aa31.28■■■□□ 2.6
TM6SF1-202ENST00000322019 MYH13Q9UKX3 1938 aa31.28■■■□□ 2.6
TM6SF1-202ENST00000322019 CACNA1SQ13698 1873 aa31.28■■■□□ 2.6
TM6SF1-202ENST00000322019 SEMA3EO15041 775 aa31.28■■■□□ 2.6
TM6SF1-202ENST00000322019 PRDX5P30044 214 aa31.28■■■□□ 2.6
TM6SF1-202ENST00000322019 OLFM4Q6UX06 510 aa31.28■■■□□ 2.6
TM6SF1-202ENST00000322019 GSG1L2A8MUP6 293 aa31.27■■■□□ 2.6
TM6SF1-202ENST00000322019 PATL2C9JE40 543 aaKnown RBP31.27■■■□□ 2.6
TM6SF1-202ENST00000322019 GJB2P29033 226 aa31.27■■■□□ 2.6
TM6SF1-202ENST00000322019 IFNL3Q8IZI9 196 aa31.27■■■□□ 2.6
TM6SF1-202ENST00000322019 SLC4A4Q9Y6R1 1079 aa31.27■■■□□ 2.6
TM6SF1-202ENST00000322019 RGPD3A6NKT7 1758 aaPredicted RBP31.27■■■□□ 2.6
TM6SF1-202ENST00000322019 RGPD4Q7Z3J3 1758 aa31.27■■■□□ 2.6
TM6SF1-202ENST00000322019 BRD1O95696 1058 aa31.26■■■□□ 2.6
TM6SF1-202ENST00000322019 SLC15A2Q16348 729 aa31.26■■■□□ 2.6
TM6SF1-202ENST00000322019 INCENPQ9NQS7 918 aa31.26■■■□□ 2.6
TM6SF1-202ENST00000322019 BBOX1O75936 387 aa31.26■■■□□ 2.59
TM6SF1-202ENST00000322019 APOBRQ0VD83 1088 aa31.26■■■□□ 2.59
TM6SF1-202ENST00000322019 CRAMP1Q96RY5 1269 aa31.26■■■□□ 2.59
TM6SF1-202ENST00000322019 SRGNP10124 158 aa31.25■■■□□ 2.59
TM6SF1-202ENST00000322019 GSE1Q14687 1217 aa31.25■■■□□ 2.59
TM6SF1-202ENST00000322019 DEFB132Q7Z7B7 95 aa31.25■■■□□ 2.59
TM6SF1-202ENST00000322019 NRXN2Q9P2S2 1712 aa31.25■■■□□ 2.59
TM6SF1-202ENST00000322019 DYNLL1P63167 89 aaKnown RBP31.25■■■□□ 2.59
TM6SF1-202ENST00000322019 MECOMQ03112 1051 aa31.25■■■□□ 2.59
TM6SF1-202ENST00000322019 NAA16Q6N069 864 aaPredicted RBP31.25■■■□□ 2.59
TM6SF1-202ENST00000322019 SDR42E1Q8WUS8 393 aa31.25■■■□□ 2.59
TM6SF1-202ENST00000322019 NAPBQ9H115 298 aa31.25■■■□□ 2.59
TM6SF1-202ENST00000322019 POLLQ9UGP5 575 aa31.25■■■□□ 2.59
TM6SF1-202ENST00000322019 PPEF1O14829 653 aaPredicted RBP31.24■■■□□ 2.59
TM6SF1-202ENST00000322019 GGA1Q9UJY5 639 aa31.24■■■□□ 2.59
TM6SF1-202ENST00000322019 MAGEB6P1A0A0J9YX57 407 aa31.23■■■□□ 2.59
TM6SF1-202ENST00000322019 DDX11L8A8MPP1 907 aa31.23■■■□□ 2.59
TM6SF1-202ENST00000322019 FOXD4L6Q3SYB3 417 aaPredicted RBP31.23■■■□□ 2.59
TM6SF1-202ENST00000322019 FOXD4L3Q6VB84 417 aaPredicted RBP31.23■■■□□ 2.59
TM6SF1-202ENST00000322019 MB21D2Q8IYB1 491 aaPredicted RBP31.23■■■□□ 2.59
TM6SF1-202ENST00000322019 NSUN4Q96CB9 384 aaKnown RBP31.23■■■□□ 2.59
TM6SF1-202ENST00000322019 PDGFDQ9GZP0 370 aaPredicted RBP31.23■■■□□ 2.59
TM6SF1-202ENST00000322019 CTDSPL2Q05D32 466 aa31.23■■■□□ 2.59
TM6SF1-202ENST00000322019 MCTP1Q6DN14 999 aa31.23■■■□□ 2.59
TM6SF1-202ENST00000322019 SYT1P21579 422 aa31.22■■■□□ 2.59
TM6SF1-202ENST00000322019 CLEC17AQ6ZS10 378 aa31.22■■■□□ 2.59
TM6SF1-202ENST00000322019 STK11IPQ8N1F8 1099 aa31.22■■■□□ 2.59
TM6SF1-202ENST00000322019 RIOK1Q9BRS2 568 aaKnown RBP31.22■■■□□ 2.59
TM6SF1-202ENST00000322019 ANTXR2P58335 489 aa31.21■■■□□ 2.59
TM6SF1-202ENST00000322019 NAP1L2Q9ULW6 460 aaPredicted RBP31.21■■■□□ 2.59
TM6SF1-202ENST00000322019 TDO2P48775 406 aa31.21■■■□□ 2.59
TM6SF1-202ENST00000322019 RALYLQ86SE5 291 aaKnown RBP31.21■■■□□ 2.59
TM6SF1-202ENST00000322019 NCOA7Q8NI08 942 aa31.21■■■□□ 2.59
TM6SF1-202ENST00000322019 TBC1D16Q8TBP0 767 aa31.21■■■□□ 2.59
TM6SF1-202ENST00000322019 TACC3Q9Y6A5 838 aa31.21■■■□□ 2.59
TM6SF1-202ENST00000322019 PDS5AQ29RF7 1337 aaKnown RBP31.21■■■□□ 2.59
TM6SF1-202ENST00000322019 PRC1O43663 620 aa31.2■■■□□ 2.59
TM6SF1-202ENST00000322019 ALX1Q15699 326 aa31.2■■■□□ 2.59
TM6SF1-202ENST00000322019 ZNF804AQ7Z570 1209 aa31.2■■■□□ 2.59
TM6SF1-202ENST00000322019 GTF3C6Q969F1 213 aa31.2■■■□□ 2.59
TM6SF1-202ENST00000322019 AGXT2Q9BYV1 514 aa31.2■■■□□ 2.59
TM6SF1-202ENST00000322019 STK32BQ9NY57 414 aa31.2■■■□□ 2.59
TM6SF1-202ENST00000322019 NEDD4P46934 1319 aa31.2■■■□□ 2.59
TM6SF1-202ENST00000322019 COL11A2P13942 1736 aaPredicted RBP31.2■■■□□ 2.59
TM6SF1-202ENST00000322019 ATP2B4P23634 1241 aa31.2■■■□□ 2.58
TM6SF1-202ENST00000322019 GRIK5Q16478 980 aa31.2■■■□□ 2.58
TM6SF1-202ENST00000322019 TDRD7Q8NHU6 1098 aaKnown RBP31.2■■■□□ 2.58
TM6SF1-202ENST00000322019 C6orf229H3BNL8 230 aa31.19■■■□□ 2.58
TM6SF1-202ENST00000322019 TRAK2O60296 914 aa31.19■■■□□ 2.58
TM6SF1-202ENST00000322019 SCRN1Q12765 414 aa31.19■■■□□ 2.58
TM6SF1-202ENST00000322019 SMIM22K7EJ46 135 aa31.18■■■□□ 2.58
TM6SF1-202ENST00000322019 JAK2O60674 1132 aa31.18■■■□□ 2.58
TM6SF1-202ENST00000322019 GNAT2P19087 354 aa31.18■■■□□ 2.58
TM6SF1-202ENST00000322019 NPR1P16066 1061 aa31.18■■■□□ 2.58
TM6SF1-202ENST00000322019 MCM5P33992 734 aa31.18■■■□□ 2.58
TM6SF1-202ENST00000322019 B4E1Z4 1266 aa31.17■■■□□ 2.58
TM6SF1-202ENST00000322019 STX6O43752 255 aa31.17■■■□□ 2.58
TM6SF1-202ENST00000322019 CCT2P78371 535 aaKnown RBP31.17■■■□□ 2.58
TM6SF1-202ENST00000322019 CYB5R4Q7L1T6 521 aa31.17■■■□□ 2.58
TM6SF1-202ENST00000322019 AATFQ9NY61 560 aaKnown RBP eCLIP31.17■■■□□ 2.58
TM6SF1-202ENST00000322019 PODXL2Q9NZ53 605 aa31.17■■■□□ 2.58
TM6SF1-202ENST00000322019 PDE6BP35913 854 aa31.17■■■□□ 2.58
TM6SF1-202ENST00000322019 NACAP1Q9BZK3 213 aa31.17■■■□□ 2.58
TM6SF1-202ENST00000322019 NCOA5Q9HCD5 579 aaKnown RBP31.17■■■□□ 2.58
TM6SF1-202ENST00000322019 CD209Q9NNX6 404 aa31.17■■■□□ 2.58
TM6SF1-202ENST00000322019 ZMYM6O95789 1325 aa31.16■■■□□ 2.58
TM6SF1-202ENST00000322019 WDR33Q9C0J8 1336 aaKnown RBP31.16■■■□□ 2.58
TM6SF1-202ENST00000322019 PPFIA3O75145 1194 aa31.16■■■□□ 2.58
TM6SF1-202ENST00000322019 C15orf52Q6ZUT6 534 aaKnown RBP31.16■■■□□ 2.58
TM6SF1-202ENST00000322019 ATP6V0A2Q9Y487 856 aa31.16■■■□□ 2.58
TM6SF1-202ENST00000322019 TRDNQ13061 729 aa31.15■■■□□ 2.58
TM6SF1-202ENST00000322019 SP8Q8IXZ3 490 aa31.15■■■□□ 2.58
TM6SF1-202ENST00000322019 ZNF622Q969S3 477 aaKnown RBP eCLIP31.15■■■□□ 2.58
TM6SF1-202ENST00000322019 GZF1Q9H116 711 aaPredicted RBP31.15■■■□□ 2.58
TM6SF1-202ENST00000322019 DZIP1Q86YF9 867 aaKnown RBP31.15■■■□□ 2.58
TM6SF1-202ENST00000322019 RAB11FIP4Q86YS3 637 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms