RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 DZIP3Q86Y13 1208 aaKnown RBP13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 ADCY9O60503 1353 aa13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 IRF6O14896 467 aa13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 ERC2O15083 957 aa13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 AP1ARQ63HQ0 302 aa13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 FERMT3Q86UX7 667 aa13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 DDX11Q96FC9 970 aa13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 DNAJC25Q9H1X3 360 aa13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
LDLRAD3-201ENST00000315571 A0A087WZG4 1122 aa13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 PEX19P40855 299 aa13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 ZNF75DP51815 510 aa13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 EIF5P55010 431 aaKnown RBP13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 ARID5BQ14865 1188 aa13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 SLFNL1Q499Z3 407 aa13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 MYD88Q99836 296 aa13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 NAIF1Q69YI7 327 aaPredicted RBP13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 EXOC4Q96A65 974 aa13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 EPC1Q9H2F5 836 aa13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 NEMFO60524 1076 aa13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.48□□□□□ -0.25
LDLRAD3-201ENST00000315571 RAD50Q92878 1312 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 RPS6KA4O75676 772 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 KIAA0754O94854 1291 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 EN1Q05925 392 aaPredicted RBP13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 FAM107BQ9H098 131 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 MAP3K15Q6ZN16 1313 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 COL15A1P39059 1388 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 AP5Z1O43299 807 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 CDR1P51861 262 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 NAA25Q14CX7 972 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 NBPF20Q3BBV1 942 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 ZNF513Q8N8E2 541 aaPredicted RBP13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 LINS1Q8NG48 757 aa13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 PAIP2Q9BPZ3 127 aaKnown RBP13.47□□□□□ -0.25
LDLRAD3-201ENST00000315571 DNM1Q05193 864 aaKnown RBP13.46□□□□□ -0.25
LDLRAD3-201ENST00000315571 BEND3Q5T5X7 828 aa13.46□□□□□ -0.25
LDLRAD3-201ENST00000315571 PROM2Q8N271 834 aa13.46□□□□□ -0.25
LDLRAD3-201ENST00000315571 N4BP2L2Q92802 583 aaPredicted RBP13.46□□□□□ -0.25
LDLRAD3-201ENST00000315571 VEZTQ9HBM0 779 aa13.46□□□□□ -0.25
LDLRAD3-201ENST00000315571 CBX8Q9HC52 389 aa13.46□□□□□ -0.25
LDLRAD3-201ENST00000315571 TADA2BQ86TJ2 420 aa13.46□□□□□ -0.25
LDLRAD3-201ENST00000315571 EP400Q96L91 3159 aa13.46□□□□□ -0.26
LDLRAD3-201ENST00000315571 SFPQP23246 707 aaKnown RBP eCLIP13.46□□□□□ -0.26
LDLRAD3-201ENST00000315571 ATP2B2Q01814 1243 aa13.46□□□□□ -0.26
LDLRAD3-201ENST00000315571 EFCAB13Q8IY85 973 aa13.46□□□□□ -0.26
LDLRAD3-201ENST00000315571 PXDNLA1KZ92 1463 aa13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 ATP5J2-PTCD1G3V325 749 aa13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 ALDH1L1O75891 902 aa13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 GCKP35557 465 aa13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 EZH2Q15910 746 aaKnown RBP13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 CWF19L2Q2TBE0 894 aaKnown RBP13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 FMNL3Q8IVF7 1028 aa13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 C9orf78Q9NZ63 289 aaPredicted RBP13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 ZNF831Q5JPB2 1677 aa13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 JAKMIP3Q5VZ66 844 aa13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 C16orf71Q8IYS4 520 aaPredicted RBP13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 LY75O60449 1722 aa13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 CICQ96RK0 1608 aaPredicted RBP13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 TRAPPC3LQ5T215 181 aa13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 NBPF11Q86T75 865 aa13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 MKRN1Q9UHC7 482 aaKnown RBP13.45□□□□□ -0.26
LDLRAD3-201ENST00000315571 ZPR1O75312 459 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 GNAI3P08754 354 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 CLNS1AP54105 237 aaKnown RBP13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 DEFB132Q7Z7B7 95 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 TFCP2L1Q9NZI6 479 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 ZNF652Q9Y2D9 606 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 ERVV-1B6SEH8 477 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 EBAG9O00559 213 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 ZBTB7BO15156 539 aaPredicted RBP13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 STX6O43752 255 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 ERLIN1O75477 346 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 RFC4P35249 363 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 MEIS3Q99687 375 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 SH3BP1Q9Y3L3 701 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 A0A087WUV0 522 aaPredicted RBP13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 CLSTN1O94985 981 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 FOXR1Q6PIV2 292 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 GIGYF2Q6Y7W6 1299 aaKnown RBP13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 CEP89Q96ST8 783 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 PDE11AQ9HCR9 933 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 ATP10DQ9P241 1426 aa13.44□□□□□ -0.26
LDLRAD3-201ENST00000315571 UBTFL1P0CB47 393 aaPredicted RBP13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 ERC1Q8IUD2 1116 aa13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 CAMKK2Q96RR4 588 aa13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 ZSCAN22P10073 491 aaPredicted RBP13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 TCIRG1Q13488 830 aa13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 HLFQ16534 295 aa13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 NEURL1BA8MQ27 555 aa13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 IGKV5-2P06315 115 aa13.43□□□□□ -0.26
LDLRAD3-201ENST00000315571 GPTP24298 496 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms