RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 AOX1Q06278 1338 aa17.3■□□□□ 0.36
TMEM41B-201ENST00000299596 GNAI3P08754 354 aa17.3■□□□□ 0.36
TMEM41B-201ENST00000299596 SREBF2Q12772 1141 aa17.3■□□□□ 0.36
TMEM41B-201ENST00000299596 NBPF12Q5TAG4 269 aaPredicted RBP17.3■□□□□ 0.36
TMEM41B-201ENST00000299596 MEIS3Q99687 375 aa17.3■□□□□ 0.36
TMEM41B-201ENST00000299596 SIL1Q9H173 461 aa17.3■□□□□ 0.36
TMEM41B-201ENST00000299596 IL15P40933 162 aaPredicted RBP17.29■□□□□ 0.36
TMEM41B-201ENST00000299596 IREB2P48200 963 aaKnown RBP17.29■□□□□ 0.36
TMEM41B-201ENST00000299596 DGKZQ13574 1117 aa17.29■□□□□ 0.36
TMEM41B-201ENST00000299596 SPRYD7Q5W111 196 aa17.29■□□□□ 0.36
TMEM41B-201ENST00000299596 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
TMEM41B-201ENST00000299596 TEKT1Q969V4 418 aa17.29■□□□□ 0.36
TMEM41B-201ENST00000299596 MCOLN1Q9GZU1 580 aa17.29■□□□□ 0.36
TMEM41B-201ENST00000299596 MAST3O60307 1309 aa17.28■□□□□ 0.36
TMEM41B-201ENST00000299596 TNNI2P48788 182 aa17.28■□□□□ 0.36
TMEM41B-201ENST00000299596 MKRN3Q13064 507 aaKnown RBP17.28■□□□□ 0.36
TMEM41B-201ENST00000299596 GRIK5Q16478 980 aa17.28■□□□□ 0.36
TMEM41B-201ENST00000299596 MIER1Q8N108 512 aa17.28■□□□□ 0.36
TMEM41B-201ENST00000299596 WDR66Q8TBY9 1149 aa17.28■□□□□ 0.36
TMEM41B-201ENST00000299596 COPRSQ9NQ92 184 aa17.28■□□□□ 0.36
TMEM41B-201ENST00000299596 FZD1Q9UP38 647 aa17.28■□□□□ 0.36
TMEM41B-201ENST00000299596 INHBEP58166 350 aa17.27■□□□□ 0.35
TMEM41B-201ENST00000299596 ATP2B3Q16720 1220 aa17.27■□□□□ 0.35
TMEM41B-201ENST00000299596 ATF7IPQ6VMQ6 1270 aa17.27■□□□□ 0.35
TMEM41B-201ENST00000299596 GNL3LQ9NVN8 582 aaKnown RBP17.27■□□□□ 0.35
TMEM41B-201ENST00000299596 SSC5DA1L4H1 1573 aa17.26■□□□□ 0.35
TMEM41B-201ENST00000299596 CCDC85CA6NKD9 419 aa17.26■□□□□ 0.35
TMEM41B-201ENST00000299596 USP2O75604 605 aaPredicted RBP17.26■□□□□ 0.35
TMEM41B-201ENST00000299596 ZBTB48P10074 688 aaPredicted RBP17.26■□□□□ 0.35
TMEM41B-201ENST00000299596 TRIM27P14373 513 aa17.26■□□□□ 0.35
TMEM41B-201ENST00000299596 ANKRD13AQ8IZ07 590 aa17.26■□□□□ 0.35
TMEM41B-201ENST00000299596 FRAT1Q92837 279 aaPredicted RBP17.26■□□□□ 0.35
TMEM41B-201ENST00000299596 ZDHHC15Q96MV8 337 aa17.26■□□□□ 0.35
TMEM41B-201ENST00000299596 CASP8AP2Q9UKL3 1982 aa17.25■□□□□ 0.35
TMEM41B-201ENST00000299596 MANSC4A6NHS7 340 aaPredicted RBP17.25■□□□□ 0.35
TMEM41B-201ENST00000299596 TCP10L2B9ZVM9 353 aa17.25■□□□□ 0.35
TMEM41B-201ENST00000299596 BCAR3O75815 825 aa17.25■□□□□ 0.35
TMEM41B-201ENST00000299596 HNRNPUQ00839 825 aaKnown RBP eCLIP17.25■□□□□ 0.35
TMEM41B-201ENST00000299596 HHIPL2Q6UWX4 724 aa17.25■□□□□ 0.35
TMEM41B-201ENST00000299596 PA2G4Q9UQ80 394 aaKnown RBP17.25■□□□□ 0.35
TMEM41B-201ENST00000299596 ECM29Q5VYK3 1845 aa17.25■□□□□ 0.35
TMEM41B-201ENST00000299596 AKAP11Q9UKA4 1901 aa17.25■□□□□ 0.35
TMEM41B-201ENST00000299596 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
TMEM41B-201ENST00000299596 TBC1D8O95759 1140 aa17.24■□□□□ 0.35
TMEM41B-201ENST00000299596 ALDH1A1P00352 501 aa17.24■□□□□ 0.35
TMEM41B-201ENST00000299596 MTX1Q13505 466 aa17.24■□□□□ 0.35
TMEM41B-201ENST00000299596 NOM1Q5C9Z4 860 aaKnown RBP17.24■□□□□ 0.35
TMEM41B-201ENST00000299596 CLMNQ96JQ2 1002 aa17.24■□□□□ 0.35
TMEM41B-201ENST00000299596 TEPSINQ96N21 525 aa17.24■□□□□ 0.35
TMEM41B-201ENST00000299596 TMOD2Q9NZR1 351 aa17.24■□□□□ 0.35
TMEM41B-201ENST00000299596 SEMA3EO15041 775 aa17.23■□□□□ 0.35
TMEM41B-201ENST00000299596 ZBTB22O15209 634 aa17.23■□□□□ 0.35
TMEM41B-201ENST00000299596 FKBP1CQ5VVH2 108 aa17.23■□□□□ 0.35
TMEM41B-201ENST00000299596 APOBEC3HQ6NTF7 200 aaKnown RBP17.23■□□□□ 0.35
TMEM41B-201ENST00000299596 WNK4Q96J92 1243 aa17.23■□□□□ 0.35
TMEM41B-201ENST00000299596 CFHR5Q9BXR6 569 aa17.23■□□□□ 0.35
TMEM41B-201ENST00000299596 TMEM39BQ9GZU3 492 aa17.23■□□□□ 0.35
TMEM41B-201ENST00000299596 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
TMEM41B-201ENST00000299596 DENND2AQ9ULE3 1009 aa17.23■□□□□ 0.35
TMEM41B-201ENST00000299596 GNAI2P04899 355 aa17.22■□□□□ 0.35
TMEM41B-201ENST00000299596 FAM83AQ86UY5 434 aa17.22■□□□□ 0.35
TMEM41B-201ENST00000299596 AKAP2Q9Y2D5 859 aa17.22■□□□□ 0.35
TMEM41B-201ENST00000299596 ARAP2Q8WZ64 1704 aa17.22■□□□□ 0.35
TMEM41B-201ENST00000299596 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
TMEM41B-201ENST00000299596 CTU1Q7Z7A3 348 aaKnown RBP17.21■□□□□ 0.35
TMEM41B-201ENST00000299596 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
TMEM41B-201ENST00000299596 HOOK2Q96ED9 719 aa17.21■□□□□ 0.35
TMEM41B-201ENST00000299596 SALL1Q9NSC2 1324 aa17.21■□□□□ 0.35
TMEM41B-201ENST00000299596 GPR25O00155 361 aa17.21■□□□□ 0.34
TMEM41B-201ENST00000299596 LDHBP07195 334 aaKnown RBP17.21■□□□□ 0.34
TMEM41B-201ENST00000299596 CACNB3P54284 484 aa17.21■□□□□ 0.34
TMEM41B-201ENST00000299596 MAP3K9P80192 1104 aa17.21■□□□□ 0.34
TMEM41B-201ENST00000299596 IFNL1Q8IU54 200 aa17.21■□□□□ 0.34
TMEM41B-201ENST00000299596 ZNF296Q8WUU4 475 aaPredicted RBP17.21■□□□□ 0.34
TMEM41B-201ENST00000299596 PHKA1P46020 1223 aa17.2■□□□□ 0.34
TMEM41B-201ENST00000299596 TIMM10P62072 90 aa17.2■□□□□ 0.34
TMEM41B-201ENST00000299596 CCDC102BQ68D86 513 aa17.2■□□□□ 0.34
TMEM41B-201ENST00000299596 OTUD7BQ6GQQ9 843 aa17.2■□□□□ 0.34
TMEM41B-201ENST00000299596 CDAN1Q8IWY9 1227 aa17.2■□□□□ 0.34
TMEM41B-201ENST00000299596 ZGPATQ8N5A5 531 aaKnown RBP17.2■□□□□ 0.34
TMEM41B-201ENST00000299596 TNNQ9UQP3 1299 aa17.2■□□□□ 0.34
TMEM41B-201ENST00000299596 PRDX5P30044 214 aa17.19■□□□□ 0.34
TMEM41B-201ENST00000299596 TFCP2Q12800 502 aa17.19■□□□□ 0.34
TMEM41B-201ENST00000299596 PKN2Q16513 984 aaKnown RBP17.19■□□□□ 0.34
TMEM41B-201ENST00000299596 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.19■□□□□ 0.34
TMEM41B-201ENST00000299596 ELP3Q9H9T3 547 aa17.19■□□□□ 0.34
TMEM41B-201ENST00000299596 CSADQ9Y600 493 aa17.19■□□□□ 0.34
TMEM41B-201ENST00000299596 A0A1B0GUL7 405 aa17.18■□□□□ 0.34
TMEM41B-201ENST00000299596 ADORA1P30542 326 aa17.18■□□□□ 0.34
TMEM41B-201ENST00000299596 RGS19P49795 217 aa17.18■□□□□ 0.34
TMEM41B-201ENST00000299596 TMEM57Q8N5G2 664 aa17.18■□□□□ 0.34
TMEM41B-201ENST00000299596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.18■□□□□ 0.343e-10■□□□□ 8.4
TMEM41B-201ENST00000299596 OPTNQ96CV9 577 aa17.18■□□□□ 0.34
TMEM41B-201ENST00000299596 DAGLAQ9Y4D2 1042 aa17.18■□□□□ 0.34
TMEM41B-201ENST00000299596 TESPA1A2RU30 521 aaPredicted RBP17.17■□□□□ 0.34
TMEM41B-201ENST00000299596 FKTNO75072 461 aa17.17■□□□□ 0.34
TMEM41B-201ENST00000299596 GJA5P36382 358 aa17.17■□□□□ 0.34
TMEM41B-201ENST00000299596 G3BP1Q13283 466 aaKnown RBP eCLIP17.17■□□□□ 0.34
TMEM41B-201ENST00000299596 MVPQ14764 893 aaKnown RBP17.17■□□□□ 0.34
TMEM41B-201ENST00000299596 DIXDC1Q155Q3 683 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms