RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 STRBPQ96SI9 672 aaKnown RBP17.73■□□□□ 0.43
DDX49-201ENST00000247003 NACAP1Q9BZK3 213 aa17.73■□□□□ 0.43
DDX49-201ENST00000247003 USP21Q9UK80 565 aa17.73■□□□□ 0.43
DDX49-201ENST00000247003 A0A1B0GUL6 1792 aa17.73■□□□□ 0.43
DDX49-201ENST00000247003 THSD7AQ9UPZ6 1657 aa17.72■□□□□ 0.43
DDX49-201ENST00000247003 PATL2C9JE40 543 aaKnown RBP17.72■□□□□ 0.43
DDX49-201ENST00000247003 BCAMP50895 628 aa17.72■□□□□ 0.43
DDX49-201ENST00000247003 SF3B3Q15393 1217 aaKnown RBP17.72■□□□□ 0.43
DDX49-201ENST00000247003 ALX1Q15699 326 aa17.72■□□□□ 0.43
DDX49-201ENST00000247003 RC3H1Q5TC82 1133 aaKnown RBP17.72■□□□□ 0.43
DDX49-201ENST00000247003 DDX19AQ9NUU7 478 aaKnown RBP17.72■□□□□ 0.43
DDX49-201ENST00000247003 LRP2BPQ9P2M1 347 aa17.72■□□□□ 0.43
DDX49-201ENST00000247003 ANGEL1Q9UNK9 670 aaKnown RBP17.72■□□□□ 0.43
DDX49-201ENST00000247003 CHD4Q14839 1912 aa17.72■□□□□ 0.43
DDX49-201ENST00000247003 MSNP26038 577 aaKnown RBP17.72■□□□□ 0.43
DDX49-201ENST00000247003 ANTXR2P58335 489 aa17.72■□□□□ 0.43
DDX49-201ENST00000247003 BICDL1Q6ZP65 573 aa17.72■□□□□ 0.43
DDX49-201ENST00000247003 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
DDX49-201ENST00000247003 TIAM2Q8IVF5 1701 aa17.71■□□□□ 0.43
DDX49-201ENST00000247003 SNAP23O00161 211 aa17.71■□□□□ 0.43
DDX49-201ENST00000247003 ZPR1O75312 459 aa17.71■□□□□ 0.43
DDX49-201ENST00000247003 CCDC192P0DO97 292 aa17.71■□□□□ 0.43
DDX49-201ENST00000247003 MAP3K11Q16584 847 aa17.71■□□□□ 0.43
DDX49-201ENST00000247003 CAVIN4Q5BKX8 364 aa17.71■□□□□ 0.43
DDX49-201ENST00000247003 GIMAP6Q6P9H5 292 aa17.71■□□□□ 0.43
DDX49-201ENST00000247003 CPLX2Q6PUV4 134 aaKnown RBP17.71■□□□□ 0.43
DDX49-201ENST00000247003 TBC1D10CQ8IV04 446 aa17.71■□□□□ 0.43
DDX49-201ENST00000247003 CNNM2Q9H8M5 875 aa17.71■□□□□ 0.43
DDX49-201ENST00000247003 BSDC1Q9NW68 430 aaPredicted RBP17.71■□□□□ 0.43
DDX49-201ENST00000247003 CDKL5O76039 1030 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 UBE4AQ14139 1066 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 ZSCAN30Q86W11 494 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 VPS37DQ86XT2 251 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 SETDB2Q96T68 719 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 TNMDQ9H2S6 317 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 ARMT1Q9H993 441 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 NARFQ9UHQ1 456 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 COL24A1Q17RW2 1714 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 PNPLA7Q6ZV29 1317 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 RPS6KA4O75676 772 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 TDO2P48775 406 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 C8orf76Q96K31 380 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 NBPF3Q9H094 633 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 GPHNQ9NQX3 736 aaPredicted RBP17.7■□□□□ 0.42
DDX49-201ENST00000247003 CCDC39Q9UFE4 941 aa17.7■□□□□ 0.42
DDX49-201ENST00000247003 CCNL1Q9UK58 526 aaPredicted RBP17.7■□□□□ 0.42
DDX49-201ENST00000247003 C4AP0C0L4 1744 aa17.69■□□□□ 0.42
DDX49-201ENST00000247003 C4BP0C0L5 1744 aa17.69■□□□□ 0.42
DDX49-201ENST00000247003 GNPATO15228 680 aa17.69■□□□□ 0.42
DDX49-201ENST00000247003 METAP2P50579 478 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDX49-201ENST00000247003 TBC1D9BQ66K14 1250 aa17.69■□□□□ 0.42
DDX49-201ENST00000247003 FBXO41Q8TF61 875 aa17.69■□□□□ 0.42
DDX49-201ENST00000247003 KRT23Q9C075 422 aa17.69■□□□□ 0.42
DDX49-201ENST00000247003 ORC3Q9UBD5 711 aaPredicted RBP17.69■□□□□ 0.42
DDX49-201ENST00000247003 RTCBQ9Y3I0 505 aaKnown RBP17.69■□□□□ 0.42
DDX49-201ENST00000247003 B4E1Z4 1266 aa17.68■□□□□ 0.42
DDX49-201ENST00000247003 SH2B2O14492 632 aaPredicted RBP17.68■□□□□ 0.42
DDX49-201ENST00000247003 LIG1P18858 919 aa17.68■□□□□ 0.42
DDX49-201ENST00000247003 KCNQ4P56696 695 aa17.68■□□□□ 0.42
DDX49-201ENST00000247003 NFXL1Q6ZNB6 911 aa17.68■□□□□ 0.42
DDX49-201ENST00000247003 NBPF5PQ86XG9 351 aaPredicted RBP17.68■□□□□ 0.42
DDX49-201ENST00000247003 NLRP3Q96P20 1036 aa17.68■□□□□ 0.42
DDX49-201ENST00000247003 DACT1Q9NYF0 836 aa17.68■□□□□ 0.42
DDX49-201ENST00000247003 SLC4A4Q9Y6R1 1079 aa17.68■□□□□ 0.42
DDX49-201ENST00000247003 ZNF804BA4D1E1 1349 aa17.68■□□□□ 0.42
DDX49-201ENST00000247003 GUCY1B3Q02153 619 aa17.68■□□□□ 0.42
DDX49-201ENST00000247003 SLC10A5Q5PT55 438 aa17.68■□□□□ 0.42
DDX49-201ENST00000247003 MEX3CQ5U5Q3 659 aaKnown RBP17.68■□□□□ 0.42
DDX49-201ENST00000247003 EPB41L4AQ9HCS5 686 aaPredicted RBP17.68■□□□□ 0.42
DDX49-201ENST00000247003 HPS5Q9UPZ3 1129 aa17.68■□□□□ 0.42
DDX49-201ENST00000247003 NEDD4P46934 1319 aa17.67■□□□□ 0.42
DDX49-201ENST00000247003 NPHP1O15259 732 aa17.67■□□□□ 0.42
DDX49-201ENST00000247003 PTMAP06454 111 aaKnown RBP17.67■□□□□ 0.42
DDX49-201ENST00000247003 CEBPZQ03701 1054 aaKnown RBP17.67■□□□□ 0.42
DDX49-201ENST00000247003 SART3Q15020 963 aaKnown RBP17.67■□□□□ 0.42
DDX49-201ENST00000247003 MFSD6Q6ZSS7 791 aa17.67■□□□□ 0.42
DDX49-201ENST00000247003 CYB5R4Q7L1T6 521 aa17.67■□□□□ 0.42
DDX49-201ENST00000247003 FUCA2Q9BTY2 467 aa17.67■□□□□ 0.42
DDX49-201ENST00000247003 RAI14Q9P0K7 980 aa17.67■□□□□ 0.42
DDX49-201ENST00000247003 ABCF2Q9UG63 623 aa17.67■□□□□ 0.42
DDX49-201ENST00000247003 DENND2AQ9ULE3 1009 aa17.67■□□□□ 0.42
DDX49-201ENST00000247003 PPFIA3O75145 1194 aa17.66■□□□□ 0.42
DDX49-201ENST00000247003 FDPSP14324 419 aaKnown RBP17.66■□□□□ 0.42
DDX49-201ENST00000247003 CYP7A1P22680 504 aa17.66■□□□□ 0.42
DDX49-201ENST00000247003 TMEM67Q5HYA8 995 aa17.66■□□□□ 0.42
DDX49-201ENST00000247003 AKNAD1Q5T1N1 836 aa17.66■□□□□ 0.42
DDX49-201ENST00000247003 SYNE3Q6ZMZ3 975 aa17.66■□□□□ 0.42
DDX49-201ENST00000247003 LCORLQ8N3X6 602 aa17.66■□□□□ 0.42
DDX49-201ENST00000247003 RGS22Q8NE09 1264 aa17.66■□□□□ 0.42
DDX49-201ENST00000247003 CLSTN2Q9H4D0 955 aa17.66■□□□□ 0.42
DDX49-201ENST00000247003 RNF41Q9H4P4 317 aaPredicted RBP17.66■□□□□ 0.42
DDX49-201ENST00000247003 COL4A1P02462 1669 aa17.66■□□□□ 0.42
DDX49-201ENST00000247003 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 GSG1L2A8MUP6 293 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 ZBTB43O43298 467 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 GYG1P46976 350 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 TPTE2Q6XPS3 522 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 C3orf67Q6ZVT6 689 aa17.65■□□□□ 0.42
DDX49-201ENST00000247003 BRAPQ7Z569 592 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms