RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Rnf181Q9CY62 165 aa18.86■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Dhx16G3X8X0 1044 aaKnown RBP18.85■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Cacnb3P54285 484 aa18.85■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Tigd5Q499M4 642 aa18.85■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Lamc2Q61092 1191 aa18.85■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Tmem39bQ810L4 492 aa18.85■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Fam83aQ8K2P2 436 aa18.85■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Fam84aQ9D650 292 aa18.85■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Lbhd1A0A087WPA0 259 aa18.84■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Mcmdc2E9Q956 681 aa18.84■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Serpinb2P12388 415 aa18.84■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 DbnlQ62418 436 aa18.84■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Slc26a8Q8R0C3 999 aa18.84■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Hps4Q99KG7 671 aa18.84■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Bag3Q9JLV1 577 aaKnown RBP18.84■□□□□ 0.61
Hmgb1-208ENSMUST00000139443 Tm4sf1Q64302 202 aa18.83■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Borcs6Q9D6W8 360 aa18.83■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Col11a1Q61245 1804 aa18.82■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Clrn2B2RVW2 232 aa18.82■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Lins1Q3U1D0 764 aa18.82■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Klrg2Q3UM83 387 aa18.82■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Ube3cQ80U95 1083 aa18.82■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Krt25Q8VCW2 446 aa18.82■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Mroh6V9GX81 722 aa18.82■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 TnksQ6PFX9 1320 aa18.81■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Traf5P70191 558 aa18.81■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Irx3P81067 507 aa18.81■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Tbc1d2bQ3U0J8 965 aa18.81■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Lgr6Q3UVD5 967 aa18.81■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Sh2d1b2Q45HK4 132 aa18.81■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Gm11437Q5QR91 290 aa18.81■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Cdcp1Q5U462 833 aa18.81■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Gimap3Q99MI6 301 aa18.81■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Jag1Q9QXX0 1218 aa18.81■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Cry2Q9R194 592 aa18.81■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Usp17ldG5E8G2 545 aa18.8■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Usp17lcG5E8I7 545 aa18.8■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Mansc4Q3UU94 337 aa18.8■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Trpv1Q704Y3 839 aa18.8■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Tspyl2Q7TQI8 677 aa18.8■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Spata21Q8BHW6 681 aa18.8■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Sf3a1Q8K4Z5 791 aaKnown RBP18.8■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 MsraQ9D6Y7 233 aa18.8■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Rbm6S4R1W5 1118 aaKnown RBP18.8■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Bcorl1A2AQH4 1781 aa18.8■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Slc27a3O88561 667 aa18.79■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Itgb7P26011 806 aa18.79■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Ddx49Q4FZF3 480 aaKnown RBP18.79■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Nme8Q715T0 586 aa18.79■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Adam39Q7M762 756 aa18.79■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Txnrd3Q99MD6 652 aa18.79■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Ube3bQ9ES34 1070 aa18.79■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Grem2O88273 168 aa18.78■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Hspa8P63017 646 aaKnown RBP18.78■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Rasa3Q60790 834 aa18.78■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Krt74Q6IFZ9 495 aa18.78■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Phf20Q8BLG0 1010 aaKnown RBP18.78■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Il31raQ8K5B1 716 aa18.78■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Taf5lQ91WQ5 589 aa18.78■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Eif2s2Q99L45 331 aaKnown RBP18.78■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Mkrn1Q9QXP6 481 aa18.78■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Skint7A7XV04 395 aa18.77■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Spryd7Q3TFQ1 196 aa18.77■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Pla2g4fQ50L41 855 aa18.77■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Krt40Q6IFX3 439 aa18.77■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Xrcc4Q924T3 326 aa18.77■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 MthfsQ9D110 203 aa18.77■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 FliiQ9JJ28 1271 aa18.77■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Tanc1Q0VGY8 1856 aa18.77■□□□□ 0.6
Hmgb1-208ENSMUST00000139443 Prr14lE9Q7C4 1971 aa18.76■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Btn2a2A4QPC6 514 aa18.76■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Nol8Q3UHX0 1147 aaKnown RBP18.76■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Trnp1Q80ZI1 223 aa18.76■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Rtp1Q8C8C1 263 aa18.76■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 C8aQ8K182 587 aa18.76■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Plekhg2Q6KAU7 1340 aa18.75■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Pitpnm2Q6ZPQ6 1335 aa18.75■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Myh6Q02566 1938 aaKnown RBP18.75■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Ces1aE9PYP1 563 aa18.75■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Zbtb7aO88939 569 aaKnown RBP18.75■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Atoh1P48985 351 aa18.75■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Ltv1Q6NSQ7 470 aaKnown RBP18.75■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Sept14Q9DA97 430 aa18.75■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Rgs12Q8CGE9 1381 aa18.75■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Ddx55Q6ZPL9 600 aaKnown RBP18.74■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 PaoxQ8C0L6 504 aa18.74■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 RabggtaQ9JHK4 567 aa18.74■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Epb41l3Q9WV92 929 aa18.74■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Pet2A2AHY8 747 aa18.73■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Flvcr1B2RXV4 560 aa18.73■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Cyp3a57D3YYZ0 503 aa18.73■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Mmp20P57748 482 aa18.73■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Nbr1P97432 988 aa18.73■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Trmt1Q3TX08 663 aa18.73■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Vps54Q5SPW0 977 aa18.73■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Yipf1Q91VU1 306 aa18.73■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Cacna1fQ9JIS7 1985 aa18.73■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Cyp4f37Q3V1F1 546 aa18.72■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Trim27Q62158 513 aa18.72■□□□□ 0.59
Hmgb1-208ENSMUST00000139443 Ppil4Q9CXG3 492 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms