RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Sil1Q9EPK6 465 aa18.65■□□□□ 0.58
Trim39-203ENSMUST00000113706 Igbp1bQ9QZ29 343 aa18.65■□□□□ 0.58
Trim39-203ENSMUST00000113706 Tuft1O08970 390 aa18.64■□□□□ 0.58
Trim39-203ENSMUST00000113706 Slc4a4O88343 1079 aa18.64■□□□□ 0.58
Trim39-203ENSMUST00000113706 Ppp1r21Q3TDD9 780 aa18.64■□□□□ 0.58
Trim39-203ENSMUST00000113706 Med4Q9CQA5 270 aa18.64■□□□□ 0.58
Trim39-203ENSMUST00000113706 Odf2lQ9D478 642 aa18.64■□□□□ 0.58
Trim39-203ENSMUST00000113706 Ltn1Q6A009 1767 aa18.64■□□□□ 0.58
Trim39-203ENSMUST00000113706 Casp12O08736 419 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 Prdm1Q60636 856 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 Krt40Q6IFX3 439 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 Ano1Q8BHY3 960 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 Slc14a2Q8R4T9 930 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 Ipo4Q8VI75 1082 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 Zscan25B2RX31 543 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 Alg3Q8K2A8 438 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 CpzQ8R4V4 654 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 Dydc2Q9D3X8 139 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 Zbtb22Q9Z0G7 638 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 Myh13B1AR69 1938 aa18.64■□□□□ 0.57
Trim39-203ENSMUST00000113706 Rgs9O54828 675 aa18.63■□□□□ 0.57
Trim39-203ENSMUST00000113706 Esyt1Q3U7R1 1092 aaKnown RBP18.63■□□□□ 0.57
Trim39-203ENSMUST00000113706 Agtpbp1Q641K1 1218 aa18.63■□□□□ 0.57
Trim39-203ENSMUST00000113706 Rcan3Q9JKK0 239 aa18.63■□□□□ 0.57
Trim39-203ENSMUST00000113706 A0A1W2P7S8 802 aa18.63■□□□□ 0.57
Trim39-203ENSMUST00000113706 Cdc5lQ6A068 802 aaKnown RBP18.63■□□□□ 0.57
Trim39-203ENSMUST00000113706 Med23Q80YQ2 1367 aa18.63■□□□□ 0.57
Trim39-203ENSMUST00000113706 FosbP13346 338 aa18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 MeiocA2AG06 965 aa18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 Gnat2P50149 354 aa18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 NfixP70257 488 aa18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 Trim59Q922Y2 403 aa18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 Chd1lQ9CXF7 900 aa18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 Mrpl44Q9CY73 333 aaKnown RBP18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 Atp8b3Q6UQ17 1335 aa18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 Fam170aQ66LM6 333 aa18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 Strip1Q8C079 837 aa18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 Nup88Q8CEC0 753 aaKnown RBP18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 Letm1Q9Z2I0 738 aa18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 Spata31d1bE9QA57 1361 aa18.62■□□□□ 0.57
Trim39-203ENSMUST00000113706 TrdnE9Q9K5 693 aa18.61■□□□□ 0.57
Trim39-203ENSMUST00000113706 Fam83bQ0VBM2 1012 aa18.61■□□□□ 0.57
Trim39-203ENSMUST00000113706 Gm5592Q3V0A6 857 aa18.61■□□□□ 0.57
Trim39-203ENSMUST00000113706 Krt84Q99M73 603 aa18.61■□□□□ 0.57
Trim39-203ENSMUST00000113706 Cnnm3Q32NY4 713 aa18.61■□□□□ 0.57
Trim39-203ENSMUST00000113706 Nap1l3Q794H2 544 aa18.61■□□□□ 0.57
Trim39-203ENSMUST00000113706 Cxcl11Q9JHH5 100 aa18.61■□□□□ 0.57
Trim39-203ENSMUST00000113706 Zfp51Q3U4L8 781 aa18.61■□□□□ 0.57
Trim39-203ENSMUST00000113706 Casc1Q6TDU8 730 aa18.61■□□□□ 0.57
Trim39-203ENSMUST00000113706 NesQ6P5H2 1864 aaKnown RBP18.6■□□□□ 0.57
Trim39-203ENSMUST00000113706 Pde6aP27664 859 aa18.6■□□□□ 0.57
Trim39-203ENSMUST00000113706 Ubash3aQ3V3E1 624 aa18.6■□□□□ 0.57
Trim39-203ENSMUST00000113706 Erich6bQ9D4S6 220 aa18.6■□□□□ 0.57
Trim39-203ENSMUST00000113706 Pcmtd1P59913 357 aa18.6■□□□□ 0.57
Trim39-203ENSMUST00000113706 Ccdc174Q3U155 467 aa18.6■□□□□ 0.57
Trim39-203ENSMUST00000113706 Dynll1P63168 89 aa18.59■□□□□ 0.57
Trim39-203ENSMUST00000113706 1810065E05RikQ5NC41 235 aa18.59■□□□□ 0.57
Trim39-203ENSMUST00000113706 Ell2Q3UKU1 639 aa18.59■□□□□ 0.57
Trim39-203ENSMUST00000113706 Ifit1Q64282 463 aa18.59■□□□□ 0.57
Trim39-203ENSMUST00000113706 Zfp317Q8C0Q5 607 aa18.59■□□□□ 0.57
Trim39-203ENSMUST00000113706 Plcd1Q8R3B1 756 aa18.59■□□□□ 0.57
Trim39-203ENSMUST00000113706 Slfn1Q9Z0I7 337 aa18.59■□□□□ 0.57
Trim39-203ENSMUST00000113706 Cfap69Q8BH53 942 aa18.59■□□□□ 0.57
Trim39-203ENSMUST00000113706 Tpcn2Q8BWC0 731 aa18.59■□□□□ 0.57
Trim39-203ENSMUST00000113706 Sall1Q9ER74 1322 aa18.58■□□□□ 0.57
Trim39-203ENSMUST00000113706 Dennd3A2RT67 1274 aa18.58■□□□□ 0.57
Trim39-203ENSMUST00000113706 Fam198bQ3UPI1 517 aa18.58■□□□□ 0.57
Trim39-203ENSMUST00000113706 St5Q924W7 1134 aa18.58■□□□□ 0.57
Trim39-203ENSMUST00000113706 Ndufa8Q9DCJ5 172 aa18.58■□□□□ 0.57
Trim39-203ENSMUST00000113706 Wdr19Q3UGF1 1341 aa18.58■□□□□ 0.56
Trim39-203ENSMUST00000113706 SfswapQ3USH5 945 aaKnown RBP18.58■□□□□ 0.56
Trim39-203ENSMUST00000113706 Dhx16G3X8X0 1044 aaKnown RBP18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 Lnx1O70263 728 aa18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 Mcm3P25206 812 aaKnown RBP18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 Myl10Q62082 202 aa18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 NsmfQ99NF2 532 aa18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 Bnip3O55003 187 aa18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 Cd3dP04235 173 aa18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 Srgap1Q91Z69 1062 aa18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 SrrtQ99MR6 875 aaKnown RBP18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 Stag1Q9D3E6 1258 aa18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 Cyp26a1O55127 497 aa18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 Psd3Q2PFD7 1037 aa18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 Slc44a1Q6X893 653 aa18.57■□□□□ 0.56
Trim39-203ENSMUST00000113706 Fchsd1Q6PFY1 688 aa18.56■□□□□ 0.56
Trim39-203ENSMUST00000113706 DymQ8CHY3 669 aa18.56■□□□□ 0.56
Trim39-203ENSMUST00000113706 Gpr108Q91WD0 569 aa18.56■□□□□ 0.56
Trim39-203ENSMUST00000113706 CgnP59242 1191 aa18.56■□□□□ 0.56
Trim39-203ENSMUST00000113706 Cnnm2Q3TWN3 875 aa18.56■□□□□ 0.56
Trim39-203ENSMUST00000113706 Q3TYL0 343 aa18.56■□□□□ 0.56
Trim39-203ENSMUST00000113706 Msl1Q6PDM1 616 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 U2af1l4Q8BGJ9 220 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 R3hcc1Q8BSI6 488 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 Terf2ipQ91VL8 393 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 Tnni2P13412 182 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 Togaram1Q6A070 1776 aaKnown RBP18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 Olfml1Q8BSH2 233 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 Ttc12Q8BW49 704 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 Efcc1Q9JJF6 558 aa18.55■□□□□ 0.56
Trim39-203ENSMUST00000113706 AfdnQ9QZQ1 1820 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms