RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 Hs6st3Q9QYK4 470 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Gja10Q9WUS4 505 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Ppfia1B2RXQ2 1266 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 1700006A11RikB9EHI3 544 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Ppp4r3aQ6P2K6 820 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 LarsQ8BMJ2 1178 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Slc39a11Q8BWY7 342 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Nat10Q8K224 1024 aaKnown RBP8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Krt25Q8VCW2 446 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Iqca1Q9CUL5 857 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Sept12Q9D451 317 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Ddx60E9PZQ1 1711 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 TnksQ6PFX9 1320 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Snapc4Q8BP86 1333 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Spata31d1bE9QA57 1361 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Celf1P28659 486 aaKnown RBP8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Bag1Q60739 355 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Ctr9Q62018 1173 aaKnown RBP8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Sptlc3Q8BG54 563 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Def6Q8C2K1 630 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Rec8Q8C5S7 591 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Vps18Q8R307 973 aa8.69□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Cfap99A0A140LIX9 648 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Tpm3-rs7D3Z2H9 248 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Znf496Q5SXI5 585 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Hand2Q61039 217 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Rassf4Q8CB96 322 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Slc51aQ8R000 340 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Add3Q9QYB5 706 aaKnown RBP8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Nhsl1Q8CAF4 1587 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Mtx1P47802 317 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Nlrp1aQ2LKU9 1182 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Pnpla2Q8BJ56 486 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Clstn1Q9EPL2 979 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Znf704Q9ERQ3 566 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Rbm8a2A0A0N4SUH6 174 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 FosbP13346 338 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Abcf1Q6P542 837 aaKnown RBP8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Trim56Q80VI1 734 aaKnown RBP8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Mtmr3Q8K296 1196 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Amhr2Q8K592 568 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Polr3dQ91WD1 398 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Rbm8aQ9CWZ3 174 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Plekho1Q9JIY0 408 aa8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 AatfQ9JKX4 526 aaKnown RBP8.68□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Ank1Q02357 1862 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Ugt1a5B2RT14 529 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Gm7347D3YYI9 267 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Speer4aF8VPX6 267 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 TsksO54887 585 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Plcb3P51432 1234 aaKnown RBP8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Snrpa1P57784 255 aaKnown RBP8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Bach1P97302 739 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Ifit2Q64112 472 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Ufl1Q8CCJ3 793 aaKnown RBP8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Fam76aQ922G2 307 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Osbpl5Q9ER64 874 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Golga5Q9QYE6 729 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 UtrnE9Q6R7 3430 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Brpf3B2KF05 1204 aaKnown RBP8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 NefhP19246 1090 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Pla2g4fQ50L41 855 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Trak2Q6P9N8 913 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Kcnf1Q7TSH7 493 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Cdca7lQ922M5 438 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Creld2Q9CYA0 350 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Aox1O54754 1333 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 1700029H14RikE9PY36 240 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Pde8bE9Q4S1 865 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Clec11aO88200 328 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Mcm6P97311 821 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Hspa4Q61316 841 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Nlrp9aQ66X03 949 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Atf7Q8R0S1 413 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Stk38Q91VJ4 465 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Elf2Q9JHC9 593 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Lgr5Q9Z1P4 907 aa8.67□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Ccdc85cE9Q6B2 420 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Dok7Q18PE0 504 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Leo1Q5XJE5 667 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Asap2Q7SIG6 958 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Gabpb2P81069 414 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Jdp2P97875 163 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 SowahdQ8BY98 327 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Rhot2Q8JZN7 620 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Emilin1Q99K41 1017 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Vps33aQ9D2N9 598 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Ak2Q9WTP6 239 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Gcom1E9PZ54 550 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 MyzapQ3UIJ9 466 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Fam198bQ3UPI1 517 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Trim25Q61510 634 aaKnown RBP8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Znf428Q8C1M2 176 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 DonsonQ9QXP4 560 aa8.66□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Cyp2d10P24456 504 aa8.65□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Slc38a10Q5I012 1090 aa8.65□□□□□ -1.02
Bdnf-203ENSMUST00000111043 1810065E05RikQ5NC41 235 aa8.65□□□□□ -1.02
Bdnf-203ENSMUST00000111043 HlfQ8BW74 295 aa8.65□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Nrbp1Q99J45 535 aa8.65□□□□□ -1.02
Bdnf-203ENSMUST00000111043 Ankrd1Q9CR42 319 aa8.65□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms