RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 Zcchc17Q9ESX4 241 aaKnown RBP16.01■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Wdr19Q3UGF1 1341 aa16.01■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Gm3409A0A0G2JE67 319 aa16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Plekhd1B2RPU2 505 aa16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Tbx2Q60707 711 aa16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Gm21985Q6P6P5 1106 aa16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Nek5Q7TSC3 627 aa16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Ccdc158Q8CDI6 1109 aa16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Nek9Q8K1R7 984 aa16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Edc3Q8K2D3 508 aaKnown RBP16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Prc1Q99K43 603 aaKnown RBP16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Exoc3l2D3YUP5 789 aa16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Sptlc2P97363 560 aaKnown RBP16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Smc1bQ920F6 1248 aa16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Gnl2Q99LH1 728 aaKnown RBP16■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Akap11E9Q777 1895 aa15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Bin1O08539 588 aaKnown RBP15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 FosbP13346 338 aa15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Map3k2Q61083 619 aa15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Fchsd1Q6PFY1 688 aa15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Nxf7Q80SZ6 620 aaKnown RBP15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Gdap1l1Q8VE33 370 aa15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Hps3Q91VB4 1002 aa15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Zkscan3Q91VW9 553 aa15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Lrrfip2Q91WK0 415 aa15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Flt4P35917 1363 aa15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Slit1Q80TR4 1531 aa15.99■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Ranbp1P34022 203 aaKnown RBP15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Ccdc57Q6PHN1 1016 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Tubb2aQ7TMM9 445 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Ankrd23Q812A3 306 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Q8C1R3 189 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Evc2Q8K1G2 1220 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Tubb2bQ9CWF2 445 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Clic4Q9QYB1 253 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Ric1Q69ZJ7 1422 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Pramel3A2AHA7 463 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Gm7903A2AWL1 463 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 AV320801A2AWL3 467 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Gm15023L7MUB4 467 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Apba2P98084 750 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Znhit6Q3UFB2 460 aaKnown RBP15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Gm28047Q3US59 414 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Usp13Q5BKP2 858 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 RabggtaQ9JHK4 567 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Irx5Q9JKQ4 484 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Fut8Q9WTS2 575 aa15.98■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Ccng2O08918 344 aa15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 LtkP08923 888 aa15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Pde11aP0C1Q2 933 aa15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Grm8P47743 908 aa15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 CrklP47941 303 aa15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 PsapQ61207 557 aaKnown RBP15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Cgref1Q8R1U2 281 aa15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 BbxQ8VBW5 907 aa15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Zcrb1Q9CZ96 217 aaKnown RBP15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Amotl1Q9D4H4 968 aa15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Col1a2Q01149 1372 aa15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 VirmaA2AIV2 1811 aaKnown RBP15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Ddx60E9PZQ1 1711 aa15.97■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Diaph1O08808 1255 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 NefhP19246 1090 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Pfkfb1P70266 471 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Cct2P80314 535 aaKnown RBP15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Nbr1P97432 988 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Acbd5Q5XG73 508 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Coro7Q9D2V7 922 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Cdc45Q9Z1X9 566 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Sall1Q9ER74 1322 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Rbbp8nlA2ABX0 614 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Chrm1P12657 460 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Ets1P27577 440 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Cdr2P97817 455 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Ncaph2Q8BSP2 607 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Ppfibp1Q8C8U0 969 aaKnown RBP15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Atad2Q8CDM1 1040 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Pms1Q8K119 917 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 OptnQ8K3K8 584 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Erc1Q99MI1 1120 aa15.96■□□□□ 0.15
Hoxc4-201ENSMUST00000100164 Sycp2lA0A0M3U1B0 842 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Trim55G3X8Y1 545 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Hoxc9P09633 260 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Pola2P33611 600 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Tubb5P99024 444 aaKnown RBP15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Fsd1Q7TPM6 496 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 4930504O13RikQ8C5Z9 145 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Tmem119Q8R138 280 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Terf2ipQ91VL8 393 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Card14Q99KF0 999 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Ppp2r3dQ9Z176 491 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Prl7a2O54831 253 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Ddb1Q3U1J4 1140 aaKnown RBP15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Jakmip3Q5DTN8 844 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Cbx8Q9QXV1 362 aa15.95■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 FocadA2AKG8 1798 aa15.94■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Ubap1lG3UW59 384 aa15.94■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Npdc1Q64322 332 aa15.94■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Asnsd1Q8BFS9 627 aa15.94■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Cdc23Q8BGZ4 597 aa15.94■□□□□ 0.14
Hoxc4-201ENSMUST00000100164 Mb21d2Q8C525 428 aa15.94■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 85.7 ms