RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Slfn1Q9Z0I7 337 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Scn4aQ9ER60 1841 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gm6465F7A7Y6 181 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gm8897L7N294 181 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gm8906L7N2A2 181 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Trim80Q3V061 624 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Rmdn2Q8BSE0 410 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ttc19Q8CC21 365 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gtpbp10Q8K013 366 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Polr3cQ9D483 533 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 FibpQ9JI19 357 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Izumo3A6PWV3 263 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Agr2O88312 175 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Cplx2P84086 134 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Hnrnpul2Q00PI9 745 aaKnown RBP10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Lamb3Q61087 1168 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Kcnk13Q8R1P5 405 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Prpf3Q922U1 683 aaKnown RBP10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 2010005H15RikQ9D8D6 97 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Capn12Q9ER56 720 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ush1cQ9ES64 910 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gdpd2Q9ESM6 539 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Rilpl1Q9JJC6 406 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Pard6gQ9JK84 382 aa10.61□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ttll5Q8CHB8 1328 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gm3147A0A0J9YU88 481 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gm10424A0A0J9YVD0 481 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gm6133B2RY53 190 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 G430095P16RikE9Q913 147 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gm7971J3QMM8 481 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Speer4dL7N216 212 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Myd88P22366 296 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Nat2P50295 290 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Chl1P70232 1209 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Sema3eP70275 775 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Syce2Q505B8 171 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Agtpbp1Q641K1 1218 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 BC061212Q6P8K3 481 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Iws1Q8C1D8 766 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Znf428Q8C1M2 176 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 A430089I19RikQ8C9W1 407 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Fam114a1Q9D281 569 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Mei1Q9D4I2 1268 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Cfap45Q9D9U9 551 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Q9DAQ4 598 aa10.6□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Kcnh4A2A5F7 1018 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 FgrP14234 517 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Skap2Q3UND0 358 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Tbc1d1Q60949 1255 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 NrrosQ8BMT4 693 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Smc5Q8CG46 1101 aaKnown RBP10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Bicdl2Q8CHW5 507 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 LrgukQ9D5S7 820 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 ShprhQ7TPQ3 1674 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Hfm1D3Z4R1 1434 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Satb1Q60611 764 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 AdpgkQ8VDL4 496 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Kcnq2Q9Z351 759 aa10.59□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Hoxa10P31310 416 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ap1m1P35585 423 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Senp1P59110 640 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Mtf2Q02395 593 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Rpusd2Q149F1 553 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 ArsiQ32KI9 573 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Hvcn1Q3U2S8 269 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Gzf1Q4VBD9 706 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Tdrd5Q5VCS6 1040 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Sra1Q80VJ2 232 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Spock3Q8BKV0 436 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Washc5Q8C2E7 1159 aaKnown RBP10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Samd3Q8C4H2 520 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Mylk2Q8VCR8 613 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Mtmr14Q8VEL2 648 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Cdc27A2A6Q5 825 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Hspa5P20029 655 aaKnown RBP10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 B3gnt4Q1RLK6 350 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 RubcnlQ3TD16 648 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ddx58Q6Q899 926 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ccp110Q7TSH4 1004 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ttc8Q8VD72 515 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Olfr1090Q8VGA6 313 aa10.58□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Cfap58B2RW38 873 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Psma3O70435 255 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Hsp90ab1P11499 724 aaKnown RBP10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Kcnb1Q03717 857 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Laptm5Q61168 261 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Kif5bQ61768 963 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Fam167aQ6P1G6 215 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Aldh8a1Q8BH00 487 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Adamts2Q8C9W3 1213 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Fam161aQ8QZV6 448 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Rhobtb2Q91V93 728 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Ubxn2aQ99KJ0 258 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Nacc2Q9DCM7 586 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Zeb2Q9R0G7 1215 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 UacaQ8CGB3 1411 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Gm18336A0A140LIU8 765 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Gm5624F6ZZG8 207 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 AfpP02772 605 aa10.57□□□□□ -0.72
Upf3b-201ENSMUST00000076265 Trim38Q5SZ99 471 aa10.57□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms