RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Ripor2Q80U16 1078 aa13.61□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Tpcn2Q8BWC0 731 aa13.61□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Pcdhb5Q91XZ5 792 aa13.61□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Cdk5rap2Q8K389 1822 aa13.61□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Lekr1B2RVN1 116 aa13.6□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Gzf1Q4VBD9 706 aa13.6□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Tfcp2Q9ERA0 502 aa13.6□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Col15a1O35206 1367 aa13.6□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Prl3d1P18121 224 aa13.6□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Cnga2Q62398 664 aa13.6□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Hps4Q99KG7 671 aa13.6□□□□□ -0.23
Shtn1-201ENSMUST00000047511 AdgbG3UZ78 1657 aa13.6□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Leo1Q5XJE5 667 aa13.6□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Nxf7Q80SZ6 620 aaKnown RBP13.6□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Gnat2P50149 354 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Plbd2Q3TCN2 594 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 ItpripQ3TNL8 555 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Ccar2Q8VDP4 922 aaKnown RBP13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Mrpl50Q8VDT9 159 aaKnown RBP13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Pcdhb22Q91XZ8 794 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Emilin1Q99K41 1017 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Cwc15Q9JHS9 229 aaKnown RBP13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Hip1rQ9JKY5 1068 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Cyp2ab1S4R196 498 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Srp68Q8BMA6 625 aaKnown RBP13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Ccdc102aQ3TMW1 549 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Adck5Q80V03 582 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Ncaph2Q8BSP2 607 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Efcc1Q9JJF6 558 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Vwa3bJ9JI28 736 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Asap2Q7SIG6 958 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Cdan1Q8CC12 1239 aa13.59□□□□□ -0.23
Shtn1-201ENSMUST00000047511 Wdr93Q402B2 695 aa13.58□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Zrsr2Q62377 462 aaKnown RBP13.58□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Ano2Q8CFW1 1002 aa13.58□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Ssr1Q9CY50 286 aaKnown RBP13.58□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Prr29B1ARI9 187 aa13.58□□□□□ -0.24
Shtn1-201ENSMUST00000047511 MarcksP26645 309 aaKnown RBP13.58□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Gemin5Q8BX17 1502 aaKnown RBP13.58□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Gjc1P28229 396 aa13.58□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Clca2Q8BG22 942 aa13.58□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Atp12aQ9Z1W8 1035 aa13.58□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Abcc12Q80WJ6 1366 aa13.58□□□□□ -0.24
Shtn1-201ENSMUST00000047511 U2af2P26369 475 aaKnown RBP13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 MypnQ5DTJ9 1315 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Spocd1B1ASB6 936 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Wdr70Q3TWF6 657 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Acap3Q6NXL5 833 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Cyp4f39Q8BGU0 532 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Trim52Q8CDV4 233 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Stn1Q8K2X3 378 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Plcd1Q8R3B1 756 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Fam228bQ497Q6 232 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 RragbQ6NTA4 374 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Ano10Q8BH79 659 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Kcnq3Q8K3F6 873 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Ino80Q6ZPV2 1559 aa13.57□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Qser1A2BIE1 1698 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Aox2Q5SGK3 1345 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Sh3bp1P55194 680 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Csrnp1P59054 583 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 PicalmQ7M6Y3 660 aaKnown RBP13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Susd4Q8BH32 490 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Nat10Q8K224 1024 aaKnown RBP13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Xrcc4Q924T3 326 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 IcoslgQ9JHJ8 322 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Cyp26a1O55127 497 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 HmmrQ00547 794 aaKnown RBP13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Oxr1Q4KMM3 866 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Slfnl1Q8BHW9 410 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Gtf2iQ9ESZ8 998 aaKnown RBP13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 CenphQ9QYM8 241 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 4930407I10RikD3Z5T8 1512 aa13.56□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Erbb4Q61527 1308 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Mex3cQ05A36 652 aaKnown RBP13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Nod2Q8K3Z0 1020 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Tab2Q99K90 693 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Gdf11Q9Z1W4 405 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Lipo1J3QME6 396 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Pip4k2aO70172 405 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Arid3aQ62431 601 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Ltb4r2Q9JJL9 360 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Tubgcp6G5E8P0 1769 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Nid2O88322 1403 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Simc1E9Q6E9 1354 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Adcy9P51830 1353 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 MaddQ80U28 1577 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Tuft1O08970 390 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 VrtnQ3SYK4 740 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Tacc1Q6Y685 774 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Klhl30Q8C3F7 581 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Brms1Q99N20 246 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Cd274Q9EP73 290 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Plekhg2Q6KAU7 1340 aa13.55□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Pcdhb9E9Q5G2 828 aa13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 MthfslL7N466 203 aa13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Cdca8Q8BHX3 289 aa13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Def6Q8C2K1 630 aa13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 StrbpQ91WM1 672 aaKnown RBP13.54□□□□□ -0.24
Shtn1-201ENSMUST00000047511 Ccne2Q9Z238 404 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms