RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 DOLPP1Q86YN1 238 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 FAM24BQ8N5W8 94 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 Q8TCH9 128 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 RAB39BQ96DA2 213 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 RNF7Q9UBF6 113 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 ACACAQ13085 2346 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 A0A0G2JNJ9 132 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 ZFP92A6NM28 416 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 CEBPZOSA8MTT3 80 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 CYB5R3P00387 301 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 OR2B8PP59922 312 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 ATP6V1FQ16864 119 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 RNF212Q495C1 297 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 LEAP2Q969E1 77 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 PINX1Q96BK5 328 aaKnown RBP15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 CIB3Q96Q77 187 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 TMEM147Q9BVK8 224 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 BIN3Q9NQY0 253 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 OR6C3Q9NZP0 311 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 Q9UFV3 132 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 IL19Q9UHD0 177 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 TIMM9Q9Y5J7 89 aa15.34■□□□□ 0.05
PRPF40B-208ENST00000548436 DMXL2Q8TDJ6 3036 aa15.33■□□□□ 0.05
PRPF40B-208ENST00000548436 HPRT1P00492 218 aa15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 PTAFRP25105 342 aa15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 TDGF1P3P51864 188 aa15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 SELENOVP59797 346 aa15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 ACSM6Q6P461 480 aa15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 ZNF561Q8N587 486 aa15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 RPP25LQ8N5L8 163 aaKnown RBP15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 OR10P1Q8NGE3 313 aa15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 TP53TG5Q9Y2B4 290 aa15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 MAP1BP46821 2468 aaKnown RBP15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 SMG1Q96Q15 3661 aaKnown RBP15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 YLPM1P49750 1951 aaKnown RBP15.33■□□□□ 0.04
PRPF40B-208ENST00000548436 hCG_1809904A0A1W2PP81 198 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 A0A1W2PR64 198 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 A0A1W2PRV1 198 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 BCL2P10415 239 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 STUMQ69YW2 141 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 SSX9Q7RTT3 188 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 TGIF2LYQ8IUE0 185 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 CISD1Q9NZ45 108 aaKnown RBP15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 VKORC1L1Q8N0U8 176 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 DEFB108BQ8NET1 73 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 OR10G4Q8NGN3 311 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 FAM216AQ8WUB2 273 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 SDSLQ96GA7 329 aa15.32■□□□□ 0.04
PRPF40B-208ENST00000548436 DCHS1Q96JQ0 3298 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 A0A1W2PPE3 182 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 MAP1LC3B2A6NCE7 125 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 FGF7P21781 194 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 RAB5BP61020 215 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 DLK1P80370 383 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 TFF3Q07654 80 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 LINC00518Q8N0U6 118 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 CISD2Q8N5K1 135 aaKnown RBP15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 YPEL4Q96NS1 127 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 MAP1LC3BQ9GZQ8 125 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 NCOR1P1Q9H4R4 102 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 C15orf62A8K5M9 175 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 ZNF727A8MUV8 499 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 C1orf196B1AJZ1 125 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 OR2C1O95371 312 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 RAB5AP20339 215 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 TAGLN2P37802 199 aaKnown RBP15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 VWC2Q2TAL6 325 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 AARDQ4LEZ3 155 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 FAM90A2PQ658T7 463 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 MRGPRGQ86SM5 289 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 Q8NA96 180 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 TVP23CQ96ET8 276 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 GAFA1Q96PS6 74 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 NIPSNAP3BQ9BS92 247 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 DCAF16Q9NXF7 216 aa15.31■□□□□ 0.04
PRPF40B-208ENST00000548436 PCNX1Q96RV3 2341 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 SPTBN2O15020 2390 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 KBTBD11-OT1A0A1B0GTJ5 212 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 PRRG2O14669 202 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 IFNA17P01571 189 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 RAB11AP62491 216 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 GNB2P62879 340 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 CT45A1Q5HYN5 189 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 PRAMEF5Q5TYX0 476 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 TCF23Q7RTU1 214 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 NUP37Q8NFH4 326 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 CT45A3Q8NHU0 189 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 CA5BP1Q8WTZ4 195 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 SLC39A9Q9NUM3 307 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 GFOD1Q9NXC2 390 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 APC2O95996 2303 aa15.3■□□□□ 0.04
PRPF40B-208ENST00000548436 RBFOX2O43251 390 aaKnown RBP eCLIP15.29■□□□□ 0.04
PRPF40B-208ENST00000548436 GYPAP02724 150 aa15.29■□□□□ 0.04
PRPF40B-208ENST00000548436 AGAP20933 346 aa15.29■□□□□ 0.04
PRPF40B-208ENST00000548436 RPL35P42766 123 aaKnown RBP15.29■□□□□ 0.04
PRPF40B-208ENST00000548436 DDB2Q92466 427 aa15.29■□□□□ 0.04
PRPF40B-208ENST00000548436 S1PR3Q99500 378 aa15.29■□□□□ 0.04
PRPF40B-208ENST00000548436 CCL13Q99616 98 aa15.29■□□□□ 0.04
PRPF40B-208ENST00000548436 PIEZO1Q92508 2521 aa15.29■□□□□ 0.04
PRPF40B-208ENST00000548436 TRAV3A0A0B4J244 114 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms