RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 IQGAP1P46940 1657 aa5.9□□□□□ -1.46
LIN7C-202ENST00000524596 SLC17A2O00624 439 aa5.9□□□□□ -1.46
LIN7C-202ENST00000524596 NXPH3O95157 252 aa5.9□□□□□ -1.46
LIN7C-202ENST00000524596 BRI3O95415 125 aa5.9□□□□□ -1.46
LIN7C-202ENST00000524596 NRN1LQ496H8 165 aa5.9□□□□□ -1.46
LIN7C-202ENST00000524596 C19orf48Q6RUI8 117 aa5.9□□□□□ -1.46
LIN7C-202ENST00000524596 TMEM179BQ7Z7N9 219 aa5.9□□□□□ -1.46
LIN7C-202ENST00000524596 PDCD1LG2Q9BQ51 273 aa5.9□□□□□ -1.46
LIN7C-202ENST00000524596 APOOQ9BUR5 198 aa5.9□□□□□ -1.46
LIN7C-202ENST00000524596 OR1A2Q9Y585 309 aa5.9□□□□□ -1.46
LIN7C-202ENST00000524596 NAV1Q8NEY1 1877 aa5.9□□□□□ -1.46
LIN7C-202ENST00000524596 C2CD4BA6NLJ0 364 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 PFN2P35080 140 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 EFNB2P52799 333 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 PRR30Q53SZ7 412 aaPredicted RBP5.9□□□□□ -1.47
LIN7C-202ENST00000524596 APRG1Q8IVJ8 170 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 OSR1Q8TAX0 266 aaPredicted RBP5.9□□□□□ -1.47
LIN7C-202ENST00000524596 GATAD1Q8WUU5 269 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 PELI2Q9HAT8 420 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 THAP10Q9P2Z0 257 aaPredicted RBP5.9□□□□□ -1.47
LIN7C-202ENST00000524596 A0A1W2PPV9 198 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 CNTFRP26992 372 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 FOXG1P55316 489 aaPredicted RBP5.9□□□□□ -1.47
LIN7C-202ENST00000524596 FOXI1Q12951 378 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 SRSF9Q13242 221 aaKnown RBP eCLIP5.9□□□□□ -1.47
LIN7C-202ENST00000524596 DTX1Q86Y01 620 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 RTL8AQ9BWD3 113 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 SCN8AQ9UQD0 1980 aa5.9□□□□□ -1.47
LIN7C-202ENST00000524596 ABCC1P33527 1531 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 MYH3P11055 1940 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 ROBO3Q96MS0 1386 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 ZFP36L2P47974 494 aaKnown RBP5.89□□□□□ -1.47
LIN7C-202ENST00000524596 C4orf26Q17RF5 130 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 SYT14P1Q58G82 188 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 PAQR6Q6TCH4 344 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 NKX2-4Q9H2Z4 354 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 JPT2Q9H910 190 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 NFAT5O94916 1531 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 TRAV14DV4A0A0A6YYC5 116 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 ATOX1O00244 68 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 SOCS1O15524 211 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 RBP4P02753 201 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 CSN3P07498 182 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 ERVK11-1P61568 191 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 LINC01559Q495D7 138 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 Q6ZWC4 215 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 C3orf22Q8N5N4 141 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 C15orf53Q8NAA6 179 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 CDC42BPAQ5VT25 1732 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 LRP5O75197 1615 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 CRYM-AS1A6NIL9 109 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 SLC25A11Q02978 314 aaKnown RBP5.89□□□□□ -1.47
LIN7C-202ENST00000524596 POU3F1Q03052 451 aaPredicted RBP5.89□□□□□ -1.47
LIN7C-202ENST00000524596 FAM27D1Q5T7N8 215 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 C3orf56Q8N813 242 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 TMEM59Q9BXS4 323 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 ABCC3O15438 1527 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 SCN9AQ15858 1988 aa5.89□□□□□ -1.47
LIN7C-202ENST00000524596 TNRC6AQ8NDV7 1962 aaKnown RBP5.89□□□□□ -1.47
LIN7C-202ENST00000524596 H0YIG0 161 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 SELPP16109 830 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 BTCP35070 178 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 ZNF563Q8TA94 476 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 NABP1Q96AH0 204 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 MRPL32Q9BYC8 188 aaKnown RBP5.88□□□□□ -1.47
LIN7C-202ENST00000524596 STRCP1A6NGW2 1772 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 CELA2BP08218 269 aaPredicted RBP5.88□□□□□ -1.47
LIN7C-202ENST00000524596 COX5AP20674 150 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 GZMMP51124 257 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 RUNX3Q13761 415 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 EFNB3Q15768 340 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 SF3B6Q9Y3B4 125 aaKnown RBP5.88□□□□□ -1.47
LIN7C-202ENST00000524596 A0A0B4J2E0 115 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 A0A1B0GX12 115 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 RHODO00212 210 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 CST7O76096 145 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 CBLN1P23435 193 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 CDKN1AP38936 164 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 Q6Q795 121 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 BCDIN3DQ7Z5W3 292 aaKnown RBP5.88□□□□□ -1.47
LIN7C-202ENST00000524596 PRSS3P2Q8NHM4 247 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 CHCHD2Q9Y6H1 151 aaPredicted RBP5.88□□□□□ -1.47
LIN7C-202ENST00000524596 DENND4AQ7Z401 1863 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 PREX2Q70Z35 1606 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 MANSC4A6NHS7 340 aaPredicted RBP5.88□□□□□ -1.47
LIN7C-202ENST00000524596 H3BP45 60 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 UNGP13051 313 aaPredicted RBP5.88□□□□□ -1.47
LIN7C-202ENST00000524596 IL3RAP26951 378 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 ADMP35318 185 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 OPRK1P41145 380 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 PHLDA2Q53GA4 152 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 Q6AWC8 147 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 LAIR2Q6ISS4 152 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 OR2I1PQ8NGU4 316 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 C18orf32Q8TCD1 76 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 IL23AQ9NPF7 189 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 TNFRSF19Q9NS68 423 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 WSB2Q9NYS7 404 aaPredicted RBP5.88□□□□□ -1.47
LIN7C-202ENST00000524596 C1RLQ9NZP8 487 aa5.88□□□□□ -1.47
LIN7C-202ENST00000524596 EPDR1Q9UM22 224 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms