RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TMEM108Q6UXF1 575 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 CHD8Q9HCK8 2581 aa13.22□□□□□ -0.29
CNKSR1-202ENST00000374253 A0A1W2PPH5 198 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 SCAF4O95104 1147 aaKnown RBP13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 THBDP07204 575 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 OR4A8P0C604 315 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 RAB2AP61019 212 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 RPS23P62266 143 aaKnown RBP13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 TFF3Q07654 80 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 CLDND2Q8NHS1 167 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 TAF15Q92804 592 aaKnown RBP eCLIP13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 SMCO4Q9NRQ5 59 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 JPT1Q9UK76 154 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 TET2Q6N021 2002 aaPredicted RBP13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 FAM90A26D6RGX4 464 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 RAB29O14966 203 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 IGKV1D-33P01593 117 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 IGKV1-33P01594 117 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 TRAT1Q6PIZ9 186 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 TCF23Q7RTU1 214 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 RCC1LQ96I51 464 aaKnown RBP13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 GAFA1Q96PS6 74 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 IL19Q9UHD0 177 aa13.21□□□□□ -0.29
CNKSR1-202ENST00000374253 ABCA4P78363 2273 aa13.21□□□□□ -0.3
CNKSR1-202ENST00000374253 TMPRSS2O15393 492 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 SRP19P09132 144 aaKnown RBP13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 CT45A1Q5HYN5 189 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 PRAMEF5Q5TYX0 476 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 ZNF787Q6DD87 383 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 MRGPRGQ86SM5 289 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 CT45A3Q8NHU0 189 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 TANC2Q9HCD6 1990 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 TNCP24821 2201 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 YPEL1O60688 119 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 CTRB1P17538 263 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 ADIPOQQ15848 244 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 STUMQ69YW2 141 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 SP5Q6BEB4 398 aaPredicted RBP13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 CTRB2Q6GPI1 263 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 LYG1Q8N1E2 194 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 NEUROG1Q92886 237 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 YPEL2Q96QA6 119 aa13.2□□□□□ -0.3
CNKSR1-202ENST00000374253 PPIHO43447 177 aaKnown RBP13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 NDUFB7P17568 137 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 GATA4P43694 442 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 PAX5Q02548 391 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 ACSM6Q6P461 480 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 OR6C3Q9NZP0 311 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 NCOR2Q9Y618 2525 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 SAA2-SAA4A0A096LPE2 208 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 hCG_1809904A0A1W2PP81 198 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 A0A1W2PR64 198 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 A0A1W2PRV1 198 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 PMS2P5A8MQ11 134 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 ZNF727A8MUV8 499 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 F2RL2O00254 374 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 SAA2P0DJI9 122 aaPredicted RBP13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 FGF7P21781 194 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 TNFSF4P23510 183 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 ZNF561Q8N587 486 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 FAM24BQ8N5W8 94 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 COL25A1Q9BXS0 654 aaPredicted RBP13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 SLC25A22Q9H936 323 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 COL6A6A6NMZ7 2263 aa13.19□□□□□ -0.3
CNKSR1-202ENST00000374253 H3BQ15 152 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 TSPAN9O75954 239 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 MYOD1P15172 320 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 C3orf36Q3SXR2 165 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 AVPI1Q5T686 147 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 OR10P1Q8NGE3 313 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 HIST1H2BAQ96A08 127 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 S1PR3Q99500 378 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 TMPRSS5Q9H3S3 457 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 TRGV10A0A0A0MS01 117 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 KBTBD11-OT1A0A1B0GTJ5 212 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 BTBD17A6NE02 478 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 CGB3P0DN86 165 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 CGB7P0DN87 165 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 IRF2P14316 349 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 RAB11AP62491 216 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 RPP25LQ8N5L8 163 aaKnown RBP13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 OR4A16Q8NH70 328 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 FAM222BQ8WU58 562 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 GFOD1Q9NXC2 390 aa13.18□□□□□ -0.3
CNKSR1-202ENST00000374253 A0A1B0GW64 132 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 HPRT1P00492 218 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 FLI1Q01543 452 aaPredicted RBP13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 CR1LQ2VPA4 569 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 ZNF506Q5JVG8 444 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 CCL17Q92583 94 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 SDSLQ96GA7 329 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 WFIKKN1Q96NZ8 548 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 MAP1LC3B2A6NCE7 125 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 HBE1P02100 147 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 PTAFRP25105 342 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 TMEM41BQ5BJD5 291 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 ZNF429Q86V71 674 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 IQCF2Q8IXL9 164 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 RAB39BQ96DA2 213 aa13.17□□□□□ -0.3
CNKSR1-202ENST00000374253 PSMG3Q9BT73 122 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms