RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 CEACAM16Q2WEN9 425 aa12.35□□□□□ -0.43
TOP3B-201ENST00000357179 NRN1LQ496H8 165 aa12.35□□□□□ -0.43
TOP3B-201ENST00000357179 COLCA1Q6ZS62 124 aa12.35□□□□□ -0.43
TOP3B-201ENST00000357179 ABCA7Q8IZY2 2146 aa12.35□□□□□ -0.43
TOP3B-201ENST00000357179 BATF2Q8N1L9 274 aa12.35□□□□□ -0.43
TOP3B-201ENST00000357179 OR5B3Q8NH48 314 aa12.35□□□□□ -0.43
TOP3B-201ENST00000357179 UHRF2Q96PU4 802 aa12.35□□□□□ -0.43
TOP3B-201ENST00000357179 SEPSECSQ9HD40 501 aaKnown RBP12.35□□□□□ -0.43
TOP3B-201ENST00000357179 OR2W1Q9Y3N9 320 aa12.35□□□□□ -0.43
TOP3B-201ENST00000357179 U3KQA8 63 aa12.35□□□□□ -0.43
TOP3B-201ENST00000357179 REG1AP05451 166 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 PRRX1P54821 245 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 RHOGP84095 191 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 OCIAD2Q56VL3 154 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 ZNF324BQ6AW86 544 aaPredicted RBP12.34□□□□□ -0.43
TOP3B-201ENST00000357179 PNKDQ8N490 385 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 IGLC7A0M8Q6 106 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 DPRXA6NFQ7 191 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 CDC34P49427 236 aaPredicted RBP12.34□□□□□ -0.43
TOP3B-201ENST00000357179 TMEM249Q2WGJ8 235 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 HLA-DRB5Q30154 266 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 GGNQ86UU5 652 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 OR56B2PQ8NGI1 322 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 FGFBP3Q8TAT2 258 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 RDH5Q92781 318 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 KCNS1Q96KK3 526 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 CST9LQ9H4G1 147 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 WNT16Q9UBV4 365 aa12.34□□□□□ -0.43
TOP3B-201ENST00000357179 TRBV9A0A0B4J1U6 114 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 FAM90A26D6RGX4 464 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 G3V3Y1 287 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 C3orf79P0CE67 100 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 DEFA4P12838 97 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 BCL3P20749 454 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 LGALS4P56470 323 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 RPL19P84098 196 aaKnown RBP12.33□□□□□ -0.44
TOP3B-201ENST00000357179 IL11RAQ14626 422 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 RPS19BP1Q86WX3 136 aaKnown RBP12.33□□□□□ -0.44
TOP3B-201ENST00000357179 NPCDR1Q9BY65 106 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 OCIAD1Q9NX40 245 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 A0A1W2PS18 150 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 SNURFLB1AK76 121 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 GDF9O60383 454 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 IER3P46695 156 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 OR10J3Q5JRS4 329 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 LDLRAD2Q5SZI1 272 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 APOBEC3DQ96AK3 386 aaPredicted RBP12.33□□□□□ -0.44
TOP3B-201ENST00000357179 SGCZQ96LD1 299 aa12.33□□□□□ -0.44
TOP3B-201ENST00000357179 QTRT1Q9BXR0 403 aaKnown RBP12.33□□□□□ -0.44
TOP3B-201ENST00000357179 TRBV6-6A0A0A6YYG2 114 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 CLDN1O95832 211 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 TFF3Q07654 80 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 OCC1Q8TAD7 63 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 SFXN3Q9BWM7 321 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 PHF7Q9BWX1 381 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-201ENST00000357179 GNB1LQ9BYB4 327 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 WNT10AQ9GZT5 417 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 MRPL27Q9P0M9 148 aaKnown RBP12.32□□□□□ -0.44
TOP3B-201ENST00000357179 FRMD6-AS1P0C7T7 363 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 THBS3P49746 956 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 LINC00596Q86U02 117 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 OR4F17Q8NGA8 305 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 OR1L1Q8NH94 360 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 RNF24Q9Y225 148 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 BRWD1Q9NSI6 2320 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 LRP5LA4QPB2 252 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 OR5B21A6NL26 309 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 ZNF83P51522 516 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 VAMP3Q15836 100 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 ZNF585BQ52M93 769 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 CLEC2AQ6UVW9 174 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 NIT1Q86X76 327 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 SPEM1Q8N4L4 309 aa12.32□□□□□ -0.44
TOP3B-201ENST00000357179 ERRFI1Q9UJM3 462 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-201ENST00000357179 ASCC3Q8N3C0 2202 aaKnown RBP12.31□□□□□ -0.44
TOP3B-201ENST00000357179 RANBP2P49792 3224 aaKnown RBP12.31□□□□□ -0.44
TOP3B-201ENST00000357179 PMS2P5A8MQ11 134 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 RNF212BA8MTL3 300 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 TMEM238C9JI98 176 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 CXCL13O43927 109 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 CIDEAO60543 219 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 ZNF324O75467 553 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-201ENST00000357179 PMCHP20382 165 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 CEACAM21Q3KPI0 293 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 MKXQ8IYA7 352 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 CLN8Q9UBY8 286 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 SPTBN5Q9NRC6 3674 aaKnown RBP12.31□□□□□ -0.44
TOP3B-201ENST00000357179 A0A1W2PRS3 328 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 KLF7O75840 302 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-201ENST00000357179 S1PR2O95136 353 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 IGLV2-14P01704 120 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 GFRA1P56159 465 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 VHLLQ6RSH7 139 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 MUC15Q8N387 334 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 RAB1CQ92928 201 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 TMEM45BQ96B21 275 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 CLDN23Q96B33 292 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 RCHY1Q96PM5 261 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 TXNDC17Q9BRA2 123 aa12.31□□□□□ -0.44
TOP3B-201ENST00000357179 SLC17A3O00476 420 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms