RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 IL36BQ9NZH7 164 aa13.65□□□□□ -0.22
UPK3B-202ENST00000334348 EP300Q09472 2414 aaPredicted RBP13.64□□□□□ -0.23
UPK3B-202ENST00000334348 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 C3orf80F5H4A9 247 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 TCF21O43680 179 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 ZBTB34Q8NCN2 500 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 SAMD10Q9BYL1 202 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 ASPMQ8IZT6 3477 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 TRAV38-1A0A0B4J264 116 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 OR5B21A6NL26 309 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 IGHV3-9P01782 118 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 CHRNB4P30926 498 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 MLF1P58340 268 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 RPS16P62249 146 aaKnown RBP13.64□□□□□ -0.23
UPK3B-202ENST00000334348 GNG3P63215 75 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 OCC1Q8TAD7 63 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 UBALD1Q8TB05 177 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 ZDHHC16Q969W1 377 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 QTRT1Q9BXR0 403 aaKnown RBP13.64□□□□□ -0.23
UPK3B-202ENST00000334348 PKIBQ9C010 78 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 WDR54Q9H977 334 aa13.64□□□□□ -0.23
UPK3B-202ENST00000334348 CNTRLQ7Z7A1 2325 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 A0A1W2PPV4 95 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 COX6A1P12074 109 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 ARF1P84077 181 aaKnown RBP13.63□□□□□ -0.23
UPK3B-202ENST00000334348 LPAL2Q16609 132 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 GCSAMLQ5JQS6 135 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 ZNF645Q8N7E2 425 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 TMEM45BQ96B21 275 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 RNF2Q99496 336 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 LRFN3Q9BTN0 628 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 PRRG4Q9BZD6 226 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 MBNL3Q9NUK0 354 aaKnown RBP13.63□□□□□ -0.23
UPK3B-202ENST00000334348 SLC45A2Q9UMX9 530 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 WDR83OSQ9Y284 106 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 MPC1Q9Y5U8 109 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 TNRC6AQ8NDV7 1962 aaKnown RBP13.63□□□□□ -0.23
UPK3B-202ENST00000334348 IGHV5-10-1A0A0J9YXX1 117 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 CTRLP40313 264 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 RPS19BP1Q86WX3 136 aaKnown RBP13.63□□□□□ -0.23
UPK3B-202ENST00000334348 SIGLECL1Q8N7X8 197 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 Q8N976 141 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 ABHD3Q8WU67 409 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 FBXL7Q9UJT9 491 aa13.63□□□□□ -0.23
UPK3B-202ENST00000334348 ARHGAP21Q5T5U3 1957 aa13.62□□□□□ -0.23
UPK3B-202ENST00000334348 DCHS1Q96JQ0 3298 aa13.62□□□□□ -0.23
UPK3B-202ENST00000334348 KMT2EQ8IZD2 1858 aa13.62□□□□□ -0.23
UPK3B-202ENST00000334348 ANKRD30BLA7E2S9 258 aa13.62□□□□□ -0.23
UPK3B-202ENST00000334348 DLL1O00548 723 aa13.62□□□□□ -0.23
UPK3B-202ENST00000334348 RHBDL1O75783 438 aa13.62□□□□□ -0.23
UPK3B-202ENST00000334348 MMP23AO75900 390 aa13.62□□□□□ -0.23
UPK3B-202ENST00000334348 NGFP01138 241 aa13.62□□□□□ -0.23
UPK3B-202ENST00000334348 ZNF816Q0VGE8 651 aaPredicted RBP13.62□□□□□ -0.23
UPK3B-202ENST00000334348 OR1L6Q8NGR2 347 aa13.62□□□□□ -0.23
UPK3B-202ENST00000334348 TNRC6BQ9UPQ9 1833 aaKnown RBP13.62□□□□□ -0.23
UPK3B-202ENST00000334348 A0A096LPE4 126 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 A0A1W2PPZ6 126 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 PRR33A8MZF0 331 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 FCN1O00602 326 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 RAB29O14966 203 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 GPX1P07203 203 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 SPINK2P20155 84 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 THBS3P49746 956 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 LGALS4P56470 323 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 MMDQ15546 238 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 C1orf174Q8IYL3 243 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 ZNF586Q9NXT0 402 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 ZNF292O60281 2723 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 A0A0G2JMM0 328 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 SCO2A0A1W2PP80 73 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 A0A1W2PPB8 328 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 A0A1W2PQM1 296 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 A0A1W2PRS3 328 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 KIR3DP1A8MWS1 328 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 F2Z2F3 143 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 TRAPPC6AO75865 159 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 S1PR2O95136 353 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 CD1BP29016 333 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 RPL30P62888 115 aaKnown RBP13.61□□□□□ -0.23
UPK3B-202ENST00000334348 EIF4EBP1Q13541 118 aaPredicted RBP13.61□□□□□ -0.23
UPK3B-202ENST00000334348 TRA2AQ13595 282 aaKnown RBP eCLIP13.61□□□□□ -0.23
UPK3B-202ENST00000334348 ZNF703Q9H7S9 590 aaPredicted RBP13.61□□□□□ -0.23
UPK3B-202ENST00000334348 R4GN57 208 aa13.61□□□□□ -0.23
UPK3B-202ENST00000334348 RIF1Q5UIP0 2472 aaKnown RBP13.6□□□□□ -0.23
UPK3B-202ENST00000334348 TRBV9A0A0B4J1U6 114 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 DIRC3C9JPN6 131 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 SIRPB1O00241 398 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 CLDN14O95500 239 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 OR2H2O95918 312 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 SP9P0CG40 484 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 KRTCAP3Q53RY4 240 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 LINC00470Q9BZP3 86 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 FOXJ2Q9P0K8 574 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 UQCR10Q9UDW1 63 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 RNF114Q9Y508 228 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 ASCC3Q8N3C0 2202 aaKnown RBP13.6□□□□□ -0.23
UPK3B-202ENST00000334348 ZNF407Q9C0G0 2248 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 C15orf62A8K5M9 175 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 J3QT63 122 aa13.6□□□□□ -0.23
UPK3B-202ENST00000334348 MRPL33O75394 65 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms