RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 GZMHP20718 246 aa13.21□□□□□ -0.29
FNDC1-201ENST00000297267 DLX1P56177 255 aa13.21□□□□□ -0.29
FNDC1-201ENST00000297267 TMEM177Q53S58 311 aa13.21□□□□□ -0.29
FNDC1-201ENST00000297267 C5orf67F2Z3F1 127 aa13.21□□□□□ -0.3
FNDC1-201ENST00000297267 SRIP30626 198 aa13.21□□□□□ -0.3
FNDC1-201ENST00000297267 UNQ5815/PRO19632Q6UWF5 114 aa13.21□□□□□ -0.3
FNDC1-201ENST00000297267 UBE2L6O14933 153 aa13.21□□□□□ -0.3
FNDC1-201ENST00000297267 CKS2P33552 79 aa13.21□□□□□ -0.3
FNDC1-201ENST00000297267 WNT5BQ9H1J7 359 aa13.21□□□□□ -0.3
FNDC1-201ENST00000297267 PMCHL1Q16048 86 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 ISLRO14498 428 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 HYPMO75409 117 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 RBFOX2O43251 390 aaKnown RBP eCLIP13.2□□□□□ -0.3
FNDC1-201ENST00000297267 PRF1P14222 555 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 CBLN1P23435 193 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 BRS3P32247 399 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 TAS2R60P59551 318 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 ZNF658BQ4V348 819 aaPredicted RBP13.2□□□□□ -0.3
FNDC1-201ENST00000297267 MSGN1A6NI15 193 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 FHL5Q5TD97 284 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 LEMD1Q68G75 181 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 RTN4RL2Q86UN3 420 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 CDK2AP1O14519 115 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 HPRT1P00492 218 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 FAM27E3Q08E93 113 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 INO80CQ6PI98 192 aaPredicted RBP13.2□□□□□ -0.3
FNDC1-201ENST00000297267 ZNF764Q96H86 408 aaPredicted RBP13.2□□□□□ -0.3
FNDC1-201ENST00000297267 TMEM222Q9H0R3 208 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 HSPB7Q9UBY9 170 aa13.2□□□□□ -0.3
FNDC1-201ENST00000297267 A0A1B0GV72 72 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 FOXA3P55318 350 aaPredicted RBP13.19□□□□□ -0.3
FNDC1-201ENST00000297267 SCAND1P57086 179 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 SFTA2Q6UW10 78 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 DSPPQ9NZW4 1301 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 TRBV5-5A0A0J9YX44 114 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 FOXI3A8MTJ6 420 aaPredicted RBP13.19□□□□□ -0.3
FNDC1-201ENST00000297267 PNKDQ8N490 385 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 SDHCQ99643 169 aaPredicted RBP13.19□□□□□ -0.3
FNDC1-201ENST00000297267 LYRM2Q9NU23 88 aaPredicted RBP13.19□□□□□ -0.3
FNDC1-201ENST00000297267 HS3ST3B1Q9Y662 390 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 MPV17P39210 176 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 TCF23Q7RTU1 214 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 METTL26Q96S19 204 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 TMEM210A6NLX4 147 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 SRD5A1P18405 259 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 EMP1P54849 157 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 PAFAH1B2P68402 229 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 GATAD1Q8WUU5 269 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 C9JCJ5 164 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 SIAH2O43255 324 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 BMI1P35226 326 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 FDCSPQ8NFU4 85 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 OR1P1Q8NH06 330 aa13.19□□□□□ -0.3
FNDC1-201ENST00000297267 WNK3Q9BYP7 1800 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 HOXA6P31267 233 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 TAF15Q92804 592 aaKnown RBP eCLIP13.18□□□□□ -0.3
FNDC1-201ENST00000297267 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 C14orf144Q96I85 54 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 CACFD1Q9UGQ2 172 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 GPR132Q9UNW8 380 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 SF3B6Q9Y3B4 125 aaKnown RBP13.18□□□□□ -0.3
FNDC1-201ENST00000297267 SNCGO76070 127 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 HIST1H1EP10412 219 aaKnown RBP13.18□□□□□ -0.3
FNDC1-201ENST00000297267 C2orf83Q53S99 150 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 ASCL2Q99929 193 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 NPVFQ9HCQ7 196 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 PNRC1Q12796 327 aaPredicted RBP13.18□□□□□ -0.3
FNDC1-201ENST00000297267 HERPUD1Q15011 391 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 PSMB11A5LHX3 300 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 TRGC1P0CF51 173 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 GOLT1AQ6ZVE7 132 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 OR4A5Q8NH83 315 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 BRCA1P38398 1863 aaKnown RBP13.18□□□□□ -0.3
FNDC1-201ENST00000297267 H0Y980 276 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 TBX6O95947 436 aaPredicted RBP13.18□□□□□ -0.3
FNDC1-201ENST00000297267 FAM27BQ5VT28 67 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 ATRAIDQ6UW56 229 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 AICDAQ9GZX7 198 aa13.18□□□□□ -0.3
FNDC1-201ENST00000297267 FAM214BQ7L5A3 538 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 ASCL5Q7RTU5 278 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 VSTM2AQ8TAG5 236 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 SCO2A0A1W2PP80 73 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 C21orf140B9A014 251 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 IDI2-AS1Q9NZ38 188 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 GREB1LQ9C091 1923 aaPredicted RBP13.17□□□□□ -0.3
FNDC1-201ENST00000297267 C7orf66A4D0T2 115 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 CD55P08174 381 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 RPL27AP46776 148 aaKnown RBP13.17□□□□□ -0.3
FNDC1-201ENST00000297267 CX3CL1P78423 397 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 TMEM187Q14656 261 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 FAM19A2Q8N3H0 131 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 ADTRPQ96IZ2 230 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 IL19Q9UHD0 177 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 ARHGEF17Q96PE2 2063 aaPredicted RBP13.17□□□□□ -0.3
FNDC1-201ENST00000297267 LYNX1G3V0Z9 82 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 LYNX1P0DP58 116 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 DLX6P56179 175 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 SURF2Q15527 256 aaPredicted RBP13.17□□□□□ -0.3
FNDC1-201ENST00000297267 PMCHL2Q9BQD1 86 aa13.17□□□□□ -0.3
FNDC1-201ENST00000297267 P2RY6Q15077 328 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms