RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 TPPPO94811 219 aa12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 HLA-DQB1P01920 261 aa12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 ELANEP08246 267 aa12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 HLA-DRB3P79483 266 aa12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 IL18Q14116 193 aa12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 HMGN3Q15651 99 aa12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 MOB3BQ86TA1 216 aa12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 OR1L1Q8NH94 360 aa12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 IL1F10Q8WWZ1 152 aa12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 MAFIPQ8WZ33 124 aa12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 GNG12Q9UBI6 72 aa12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 ZNF230Q9UIE0 474 aaPredicted RBP12.82□□□□□ -0.36
SHKBP1-215ENST00000597649 IGHV1-3A0A0C4DH29 117 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 SSX5O60225 188 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 IGHG4P01861 327 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 LYL1P12980 280 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 ZNF816Q0VGE8 651 aaPredicted RBP12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 KIAA0141Q14154 515 aaPredicted RBP12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 SRSF7Q16629 238 aaKnown RBP eCLIP12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 TMEM30BQ3MIR4 351 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 ASPHD1Q5U4P2 390 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 PYHIN1Q6K0P9 492 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 FAM53AQ6NSI3 398 aaPredicted RBP12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 FAM131AQ6UXB0 335 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 OVCH2Q7RTZ1 564 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 OR10X1Q8NGY0 326 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 C4orf3Q8WVX3 66 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 HSPB9Q9BQS6 159 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 SCPEP1Q9HB40 452 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 OR2S2Q9NQN1 319 aa12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 LIN7CQ9NUP9 197 aaKnown RBP12.81□□□□□ -0.36
SHKBP1-215ENST00000597649 IGHV3-43A0A0B4J1X8 118 aa12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 MEIS3P1A6NDR6 274 aa12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 ZNF736B4DX44 427 aaPredicted RBP12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 HSD17B6O14756 317 aa12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 FABP7O15540 132 aa12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 HSPA12AO43301 675 aa12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 LY86O95711 162 aa12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 SCTP09683 121 aa12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 IGHV3-43DP0DP04 118 aa12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 OR11H1Q8NG94 326 aa12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 OR52M1Q8NGK5 317 aa12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 OR6Q1Q8NGQ2 317 aa12.8□□□□□ -0.36
SHKBP1-215ENST00000597649 SULT1C2O00338 296 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 RGS11O94810 467 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 GAPDHP04406 335 aaKnown RBP12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 FCER2P06734 321 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 GSTT2P0CG29 244 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 GSTT2BP0CG30 244 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 PSMB8P28062 276 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 HTD2P86397 168 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 RNASE12Q5GAN4 147 aaKnown RBP12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 SPANXN2Q5MJ10 180 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 STEAP3Q658P3 488 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 C5orf24Q7Z6I8 188 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 HOGA1Q86XE5 327 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 OR52L2PQ8NGH6 319 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 OR10V1Q8NGI7 309 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 OR4A4PQ8NGN8 299 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 FCAMRQ8WWV6 532 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 S1PR3Q99500 378 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 GON7Q9BXV9 100 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 KLK15Q9H2R5 256 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 GFOD1Q9NXC2 390 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 PTTG2Q9NZH5 202 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 JPT1Q9UK76 154 aa12.79□□□□□ -0.36
SHKBP1-215ENST00000597649 F2RL1P55085 397 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 ARPC4P59998 168 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 MRPS10P82664 201 aaKnown RBP12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 Q6ZS49 121 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 GVQW1Q8N7I0 195 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 BEST4Q8NFU0 473 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 OR2T10Q8NGZ9 312 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 MYOZ3Q8TDC0 251 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 GPX8Q8TED1 209 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 ST6GALNAC6Q969X2 333 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 ABHD1Q96SE0 405 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 GNB4Q9HAV0 340 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 SLC23A1Q9UHI7 598 aa12.78□□□□□ -0.36
SHKBP1-215ENST00000597649 I3L521 148 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 BET1O15155 118 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 RBBP9O75884 186 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 CTXN2P0C2S0 81 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 ZBTB25P24278 435 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 CEACAM6P40199 344 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 PYDC2Q56P42 97 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 ZFAND6Q6FIF0 208 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 FAM71E2Q8N5Q1 922 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 OR10J5Q8NHC4 309 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 GINS4Q9BRT9 223 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 ANXA10Q9UJ72 324 aa12.77□□□□□ -0.37
SHKBP1-215ENST00000597649 IGKV1D-8A0A087WSZ0 117 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 GABARAPH6UMI1 98 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 YPEL1O60688 119 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 MOSP00540 346 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 IGF1P05019 195 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 FRMD6-AS1P0C7T7 363 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 CD1BP29016 333 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 RCVRNP35243 200 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 PPP1CCP36873 323 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms