RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PSMB2P49721 201 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 TMPRSS3P57727 454 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 TNFRSF9Q07011 255 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 CLEC2AQ6UVW9 174 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 OR8A1Q8NGG7 326 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 A6NDN8 102 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 CIDEAO60543 219 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 TMEM189A5PLL7 270 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 H2BFSP57053 126 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 ZNF658BQ4V348 819 aaPredicted RBP14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 SFXN3Q9BWM7 321 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 LINC00470Q9BZP3 86 aa14.18□□□□□ -0.14
PCDHA1-203ENST00000504120 IGHV3-72A0A0B4J1Y9 119 aa14.17□□□□□ -0.14
PCDHA1-203ENST00000504120 AREGP15514 252 aa14.17□□□□□ -0.14
PCDHA1-203ENST00000504120 OR4C12Q96R67 309 aa14.17□□□□□ -0.14
PCDHA1-203ENST00000504120 CD99P14209 185 aa14.17□□□□□ -0.14
PCDHA1-203ENST00000504120 IBA57Q5T440 356 aaKnown RBP14.17□□□□□ -0.14
PCDHA1-203ENST00000504120 WFDC3Q8IUB2 231 aa14.17□□□□□ -0.14
PCDHA1-203ENST00000504120 PUSL1Q8N0Z8 303 aaKnown RBP14.17□□□□□ -0.14
PCDHA1-203ENST00000504120 OR52M1Q8NGK5 317 aa14.17□□□□□ -0.14
PCDHA1-203ENST00000504120 BPIFA4PQ86YQ2 179 aa14.17□□□□□ -0.14
PCDHA1-203ENST00000504120 MARCH11A6NNE9 402 aa14.17□□□□□ -0.14
PCDHA1-203ENST00000504120 TMEM78Q5T7P6 136 aa14.17□□□□□ -0.14
PCDHA1-203ENST00000504120 VN1R17PQ8TDU5 208 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 GDF15Q99988 308 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 DIRC3C9JPN6 131 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 KLF7O75840 302 aaPredicted RBP14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 KIR2DL2P43627 348 aaPredicted RBP14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 DLX1P56177 255 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 ZNF273Q14593 569 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 TMEM187Q14656 261 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 MIC13Q5XKP0 118 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 HCP5Q6MZN7 132 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 TMEM45BQ96B21 275 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 RBM14Q96PK6 669 aaKnown RBP14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 TMEM74BQ9NUR3 256 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 ACAA1P09110 424 aaPredicted RBP14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 CASP8AP2Q9UKL3 1982 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 IFITM10A6NMD0 228 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 TGIF1Q15583 401 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 PPP1R32Q7Z5V6 425 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 STPG3Q8N7X2 389 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 SMIM8Q96KF7 97 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 GP6Q9HCN6 339 aa14.16□□□□□ -0.14
PCDHA1-203ENST00000504120 A0A1W2PS18 150 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 C5orf52A6NGY3 159 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 ZNF729A6NN14 1252 aaPredicted RBP14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 THY1P04216 161 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 ID4P47928 161 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 SRSF9Q13242 221 aaKnown RBP eCLIP14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 FAM209AQ5JX71 171 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 ZFP30Q9Y2G7 519 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 OR2A4O95047 310 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 OR2A7Q96R45 310 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 METTL26Q96S19 204 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 TIAF1O95411 115 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 RND2P52198 227 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 OR5P3Q8WZ94 311 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 TRBV23-1A0A0A0MS06 115 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 TWIST1Q15672 202 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 ZNF818PQ6ZRF7 136 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 APCDD1LQ8NCL9 501 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 PAM16Q9Y3D7 125 aa14.15□□□□□ -0.14
PCDHA1-203ENST00000504120 NPBWR2P48146 333 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 SUCLG1P53597 346 aaKnown RBP14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 IL17BQ9UHF5 180 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 TRAV30A0A087WSZ9 112 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 PGPA6NDG6 321 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 CFDP00746 253 aaPredicted RBP14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 POC1AQ8NBT0 407 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 OR10J6PQ8NGY7 276 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 OR9G1Q8NH87 305 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 RNF115Q9Y4L5 304 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 TMEM186Q96B77 213 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 DNAJC4Q9NNZ3 241 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 HSPB7Q9UBY9 170 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 ZG16O60844 167 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 NAT2P11245 290 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 OR11H4Q8NGC9 324 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 TBX15Q96SF7 602 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 ATG101Q9BSB4 218 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 C19orf24Q9BVV8 132 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 SEC16AO15027 2179 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 IGKV3D-11A0A0A0MRZ8 115 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 SLC25A17O43808 307 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 S1PR2O95136 353 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 HLA-DQA1P01909 254 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 SMAGPQ0VAQ4 97 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 TIMP4Q99727 224 aa14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 CHCHD2Q9Y6H1 151 aaPredicted RBP14.14□□□□□ -0.15
PCDHA1-203ENST00000504120 NPIPB9F8W1W9 429 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 C8orf88P0DMB2 117 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 SLC25A53Q5H9E4 307 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 EBLN2Q6P2I7 272 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 QTRT1Q9BXR0 403 aaKnown RBP14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 RPLP1P05386 114 aaKnown RBP14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 DANCRP0C864 163 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 MFAP4P55083 255 aa14.13□□□□□ -0.15
PCDHA1-203ENST00000504120 SLC35B1P78383 322 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms