RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 C2orf88Q9BSF0 95 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 NDFIP1Q9BT67 221 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 ABHD14AQ9BUJ0 271 aa14.79□□□□□ -0.04
HMGXB3-201ENST00000502717 IFITM10A6NMD0 228 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 FNDC7Q5VTL7 733 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 PDPNQ86YL7 162 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 BEND2Q8NDZ0 799 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 A0A0J9YW62 118 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 GFI1BQ5VTD9 330 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 C14orf144Q96I85 54 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 CXXC4Q9H2H0 198 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 TGFBR3LH3BV60 316 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 VWA1Q6PCB0 445 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 RND1Q92730 232 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 DNAJC4Q9NNZ3 241 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 TMEM56-RWDD3S4R434 201 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 C17orf51A8MQB3 221 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 LRTM2Q8N967 370 aa14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 GTF3AQ92664 365 aaKnown RBP14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 OPN3Q9H1Y3 402 aaPredicted RBP14.78□□□□□ -0.04
HMGXB3-201ENST00000502717 P01737 135 aa14.77□□□□□ -0.04
HMGXB3-201ENST00000502717 C10orf128Q5T292 105 aa14.77□□□□□ -0.04
HMGXB3-201ENST00000502717 SLC22A18ASQ8N1D0 253 aa14.77□□□□□ -0.04
HMGXB3-201ENST00000502717 ZNF488Q96MN9 340 aa14.77□□□□□ -0.04
HMGXB3-201ENST00000502717 OR1A1Q9P1Q5 309 aa14.77□□□□□ -0.04
HMGXB3-201ENST00000502717 LOC102724200A0A096LPH7 203 aaPredicted RBP14.77□□□□□ -0.04
HMGXB3-201ENST00000502717 NUTF2P61970 127 aaKnown RBP14.77□□□□□ -0.04
HMGXB3-201ENST00000502717 VMA21Q3ZAQ7 101 aa14.77□□□□□ -0.04
HMGXB3-201ENST00000502717 C10orf91Q5T1B1 145 aa14.77□□□□□ -0.04
HMGXB3-201ENST00000502717 TINAGQ9UJW2 476 aa14.77□□□□□ -0.04
HMGXB3-201ENST00000502717 TSC2P49815 1807 aa14.77□□□□□ -0.04
HMGXB3-201ENST00000502717 TRAV38-1A0A0B4J264 116 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 PATE3B3GLJ2 98 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 NEURL1O76050 574 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 KCNMB1Q16558 191 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 IBA57Q5T440 356 aaKnown RBP14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 KLF2Q9Y5W3 355 aaPredicted RBP14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 EPOPA6NHQ4 379 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 RAB29O14966 203 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 SP9P0CG40 484 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 RPL23P62829 140 aaKnown RBP14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 SLC35B1P78383 322 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 MST1LQ2TV78 715 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 TMEM97Q5BJF2 176 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 BLNKQ8WV28 456 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 OR2J1Q9GZK6 312 aa14.77□□□□□ -0.05
HMGXB3-201ENST00000502717 CSN3P07498 182 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 ARL16Q0P5N6 197 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 RTP5Q14D33 572 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 IZUMO4Q1ZYL8 232 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 MMD2Q8IY49 270 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 LRRC29Q8WV35 223 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 SVILO95425 2214 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 RP1P56715 2156 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 SPINK2P20155 84 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 PRNDQ9UKY0 176 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 FAM186AA6NE01 2351 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 AMY1AP04745 511 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 ZNF645Q8N7E2 425 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 FAM87AP0C7U9 286 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 MEOX1P50221 254 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 GNB1P62873 340 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 OR2Z1Q8NG97 314 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 ZNF501Q96CX3 271 aaPredicted RBP14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 IL36RNQ9UBH0 155 aa14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 TP53BP1Q12888 1972 aaPredicted RBP14.76□□□□□ -0.05
HMGXB3-201ENST00000502717 AMBPP02760 352 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 TNFRSF1AP19438 455 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 ABHD3Q8WU67 409 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 A0A0A6YYD4 124 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 IGHV2-70P01814 119 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 CBLN1P23435 193 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 SRIP30626 198 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 OR2Y1Q8NGV0 311 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 GAGE10A6NGK3 116 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 CFPP27918 469 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 MRPS11P82912 194 aaKnown RBP14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 STXBP6Q8NFX7 210 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 SPSB4Q96A44 273 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 DMRTA2Q96SC8 542 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 DPRXA6NFQ7 191 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 ZNF207O43670 478 aaKnown RBP14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 HBZP02008 142 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 SNRPCP09234 159 aaKnown RBP14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 TMEM45BQ96B21 275 aa14.75□□□□□ -0.05
HMGXB3-201ENST00000502717 MTCL1Q9Y4B5 1905 aaKnown RBP14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 TUSC5Q8IXB3 177 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 CT55Q8WUE5 264 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 SEBOXQ9HB31 216 aaPredicted RBP14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 DLL3Q9NYJ7 618 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 TRAV9-1A0A075B6T8 112 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 CLDN14O95500 239 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 TNFSF10P50591 281 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 RIGQ13278 110 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 P2RY6Q15077 328 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 MISP3Q96FF7 219 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 IL36GQ9NZH8 169 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 ARL14EPLP0DKL9 152 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 ERVFRD-1P60508 538 aa14.74□□□□□ -0.05
HMGXB3-201ENST00000502717 SLC25A34Q6PIV7 304 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms