RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	NBR2	O15453	112 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SYNGR1	O43759	233 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SSNA1	O43805	119 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SCGN	O76038	276 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TOX4	O94842	621 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	AKR1C4	P17516	323 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RAB3B	P20337	219 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	USF1	P22415	310 aa	Predicted RBP	5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	GADD45A	P24522	165 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	F2R	P25116	425 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FGF9	P31371	208 aa	Predicted RBP	5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PRDX2	P32119	198 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	MDH2	P40926	338 aa	Known RBP	5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	F2RL1	P55085	397 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RSU1	Q15404	277 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	DGUOK	Q16854	277 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TMEM155	Q4W5P6	130 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	UTF1	Q5T230	341 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	AWAT2	Q6E213	333 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SFRP4	Q6FHJ7	346 aa	Predicted RBP	5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CD200R1L	Q6Q8B3	271 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	WDR82	Q6UXN9	313 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TMEM91	Q6ZNR0	172 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	LYSMD2	Q8IV50	215 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SAXO1	Q8IYX7	474 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	GCSAM	Q8N6F7	178 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	POC1A	Q8NBT0	407 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR52L2P	Q8NGH6	319 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR51F2	Q8NH61	342 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RAB39B	Q96DA2	213 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	YIPF6	Q96EC8	236 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	MCRIP2	Q9BUT9	160 aa	Known RBP	5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CCDC32	Q9BV29	185 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	REG4	Q9BYZ8	158 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR51E2	Q9H255	320 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	DCSTAMP	Q9H295	470 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	METTL17	Q9H7H0	456 aa	Predicted RBP	5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	MED9	Q9NWA0	146 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TXNL4B	Q9NX01	149 aa	Known RBP	5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	KIF25	Q9UIL4	384 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	AK6	Q9Y3D8	172 aa	Known RBP	5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638		V9GY05	133 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RELN	P78509	3460 aa		5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SPTAN1	Q13813	2472 aa	Known RBP	5.13	□□□□□ -1.59
ECHDC1-208	ENST00000436638	IGKV1-27	A0A075B6S5	117 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	IGHV3OR15-7	A0A075B7D8	119 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	IGHV4-30-2	A0A087WSY4	118 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TRAV1-2	A0A0B4J238	106 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	C20orf202	A1L168	122 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SRRM5	B3KS81	715 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ANGPTL7	O43827	346 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FCGR3B	O75015	233 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	GYPA	P02724	150 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	MT-ND4	P03905	459 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TFAP2A	P05549	437 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	UBB	P0CG47	229 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PGA5	P0DJD9	388 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	HIST1H1B	P16401	226 aa	Known RBP	5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FUT3	P21217	361 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	MPZ	P25189	248 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	GABRA2	P47869	451 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR3A4P	P47883	348 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	NPBWR1	P48145	328 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	RAB5C	P51148	216 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR2B8P	P59922	312 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	LSM3	P62310	102 aa	Known RBP	5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	MRPS10	P82664	201 aa	Known RBP	5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	PSG5	Q15238	335 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TCTEX1D4	Q5JR98	221 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CXorf66	Q5JRM2	361 aa	Predicted RBP	5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	CLLU1	Q5K131	121 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FAM201A	Q5SY85	155 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	GLIPR1L1	Q6UWM5	242 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FAM159A	Q6UWV7	190 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SIGLEC15	Q6ZMC9	328 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ACP7	Q6ZNF0	438 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SLC36A1	Q7Z2H8	476 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	LRRTM1	Q86UE6	522 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	NOXA1	Q86UR1	476 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FAM90A1	Q86YD7	464 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	TGIF2LY	Q8IUE0	185 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	C11orf53	Q8IXP5	236 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	BCL6B	Q8N143	479 aa	Predicted RBP	5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	C8orf31	Q8N9H6	132 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	WFDC11	Q8NEX6	87 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR8B3	Q8NGG8	313 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR6M1	Q8NGM8	313 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	WIPF2	Q8TF74	440 aa	Predicted RBP	5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ZNF488	Q96MN9	340 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	OR8B2	Q96RD0	313 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	FUNDC2	Q9BWH2	189 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	KRTAP9-3	Q9BYQ3	159 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	KCNK15	Q9H427	330 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	ZNF665	Q9H7R5	613 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	WFDC1	Q9HC57	220 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	SPANXA1	Q9NS26	97 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	NLK	Q9UBE8	527 aa		5.12	□□□□□ -1.59
ECHDC1-208	ENST00000436638	HSPB7	Q9UBY9	170 aa		5.12	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms