RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 TPRX1Q8N7U7 411 aa10.84□□□□□ -0.67
DNMT3A-202ENST00000321117 DEFB108BQ8NET1 73 aa10.84□□□□□ -0.67
DNMT3A-202ENST00000321117 OR1L6Q8NGR2 347 aa10.84□□□□□ -0.67
DNMT3A-202ENST00000321117 IER2Q9BTL4 223 aa10.84□□□□□ -0.67
DNMT3A-202ENST00000321117 PI4KAP42356 2102 aa10.84□□□□□ -0.67
DNMT3A-202ENST00000321117 FBXW9Q5XUX1 488 aa10.84□□□□□ -0.67
DNMT3A-202ENST00000321117 SCCPDHQ8NBX0 429 aa10.84□□□□□ -0.67
DNMT3A-202ENST00000321117 OR4P4Q8NGL7 312 aa10.84□□□□□ -0.67
DNMT3A-202ENST00000321117 TRIOBPQ9H2D6 2365 aa10.83□□□□□ -0.67
DNMT3A-202ENST00000321117 LRRC30A6NM36 301 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 RHBDL1O75783 438 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 RPLP1P05386 114 aaKnown RBP10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 LRRC29Q8WV35 223 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 NDUFAF3Q9BU61 184 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 ZNF253O75346 499 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 NAPSAO96009 420 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 HGFACQ04756 655 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 HSPB9Q9BQS6 159 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 CXXC4Q9H2H0 198 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 CENPFP49454 3210 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 LOC102723996A0A087X1L8 192 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 PATE3B3GLJ2 98 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 TCL1AP56279 114 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 UBE2G1P62253 170 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 HLA-DRB5Q30154 266 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 WDR73Q6P4I2 378 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 FOXL2NBQ6ZUU3 175 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 OR2Z1Q8NG97 314 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 SEMA5BQ9P283 1151 aa10.83□□□□□ -0.68
DNMT3A-202ENST00000321117 UMODP07911 640 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 CEBPDP49716 269 aaPredicted RBP10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 PAFAH1B2P68402 229 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 PRR27Q6MZM9 219 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 ASCL4Q6XD76 172 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 OR5B3Q8NH48 314 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 TXNDC17Q9BRA2 123 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 PXMP4Q9Y6I8 212 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 TRAV34A0A0B4J273 112 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 RAB29O14966 203 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 MPDU1O75352 247 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 CLDN14O95500 239 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 MT-CO3P00414 261 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 TCTEX1D1Q8N7M0 179 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 POM121L2Q96KW2 1035 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 LINC00470Q9BZP3 86 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 COMMD5Q9GZQ3 224 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 ICE1Q9Y2F5 2266 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 ODAMA1E959 279 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 FOXI3A8MTJ6 420 aaPredicted RBP10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 AMBPP02760 352 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 LCN2P80188 198 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 RTL8BQ17RB0 113 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 SSX7Q7RTT5 188 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 GTF3AQ92664 365 aaKnown RBP10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 CLCF1Q9UBD9 225 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 SSUH2Q9Y2M2 353 aa10.82□□□□□ -0.68
DNMT3A-202ENST00000321117 APOA2P02652 100 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 P2RY6Q15077 328 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 PSG5Q15238 335 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 RSPO1Q2MKA7 263 aaPredicted RBP10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 ALKBH6Q3KRA9 238 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 FAM90A2PQ658T7 463 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 ABLIM2Q6H8Q1 611 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 OR4S2Q8NH73 311 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 TMEM45BQ96B21 275 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 C14orf144Q96I85 54 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 NPCDR1Q9BY65 106 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 TTTY12Q9BZ98 90 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 THADAQ6YHU6 1953 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 LTBP2Q14767 1821 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 NRN1LQ496H8 165 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 ZNF324BQ6AW86 544 aaPredicted RBP10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 LYG1Q8N1E2 194 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 TMEM170AQ8WVE7 144 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 ELOVL1Q9BW60 279 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 OR6C3Q9NZP0 311 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 CEP250Q9BV73 2442 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 TMEM50AO95807 157 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 ADH4P08319 380 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 OR5G3P0C626 314 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 COTL1Q14019 142 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 TMEM251Q8N6I4 163 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 SIGLEC12Q96PQ1 595 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 GRIFINA4D1Z8 144 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 TMEM210A6NLX4 147 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 NDUFB7P17568 137 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 CCL11P51671 97 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 TFF3Q07654 80 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 SRSF7Q16629 238 aaKnown RBP eCLIP10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 MIC13Q5XKP0 118 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 ZNF826PQ6ZT77 177 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 TMEM167BQ9NRX6 74 aa10.81□□□□□ -0.68
DNMT3A-202ENST00000321117 TRAV24A0A0B4J272 114 aa10.8□□□□□ -0.68
DNMT3A-202ENST00000321117 MARCH11A6NNE9 402 aa10.8□□□□□ -0.68
DNMT3A-202ENST00000321117 GZMHP20718 246 aa10.8□□□□□ -0.68
DNMT3A-202ENST00000321117 NPY1RP25929 384 aa10.8□□□□□ -0.68
DNMT3A-202ENST00000321117 OR5I1Q13606 314 aa10.8□□□□□ -0.68
DNMT3A-202ENST00000321117 GABRA6Q16445 453 aa10.8□□□□□ -0.68
DNMT3A-202ENST00000321117 ZDHHC16Q969W1 377 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms